RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 MPHOSPH6Q99547 160 aaKnown RBP16.24■□□□□ 0.19
CCDC43-203ENST00000588210 TMEM106CQ9BVX2 250 aa16.24■□□□□ 0.19
CCDC43-203ENST00000588210 PARD6BQ9BYG5 372 aa16.24■□□□□ 0.19
CCDC43-203ENST00000588210 ARFGAP3Q9NP61 516 aa16.24■□□□□ 0.19
CCDC43-203ENST00000588210 PCDHA4Q9UN74 947 aa16.24■□□□□ 0.19
CCDC43-203ENST00000588210 ASTN1O14525 1302 aa16.24■□□□□ 0.19
CCDC43-203ENST00000588210 A0A0U1RQJ8 604 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 SASH3O75995 380 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 ALDH5A1P51649 535 aaPredicted RBP16.23■□□□□ 0.19
CCDC43-203ENST00000588210 CHMP4BP1P59074 171 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 TEX2Q8IWB9 1127 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 ATRIPQ8WXE1 791 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 RNF208Q9H0X6 261 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 UNC93B1Q9H1C4 597 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 PSTPIP2Q9H939 334 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 LCTP09848 1927 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 CCDC151A5D8V7 595 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 CCDC85CA6NKD9 419 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 B4DLN1 442 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 M0R2N6 131 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 STXBP3O00186 592 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 PIK3CDO00329 1044 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 SNAI1O95863 264 aaPredicted RBP16.23■□□□□ 0.19
CCDC43-203ENST00000588210 MYCP01106 439 aaPredicted RBP16.23■□□□□ 0.19
CCDC43-203ENST00000588210 CYBAP13498 195 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 STAT6P42226 847 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 MRPL12P52815 198 aaKnown RBP16.23■□□□□ 0.19
CCDC43-203ENST00000588210 NAPAP54920 295 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 TUBB4BP68371 445 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 SEMA3FQ13275 785 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 BRD3Q15059 726 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 CYP26C1Q6V0L0 522 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 ARMCX2Q7L311 632 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 MORC4Q8TE76 937 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 CUL5Q93034 780 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 DISC1Q9NRI5 854 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 TAB2Q9NYJ8 693 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 COL20A1Q9P218 1284 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 MYO1AQ9UBC5 1043 aa16.23■□□□□ 0.19
CCDC43-203ENST00000588210 ZNF569Q5MCW4 686 aa16.22■□□□□ 0.19
CCDC43-203ENST00000588210 DAGLBQ8NCG7 672 aa16.22■□□□□ 0.19
CCDC43-203ENST00000588210 NSUN6Q8TEA1 469 aaKnown RBP16.22■□□□□ 0.19
CCDC43-203ENST00000588210 TAAR1Q96RJ0 339 aa16.22■□□□□ 0.19
CCDC43-203ENST00000588210 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.22■□□□□ 0.19
CCDC43-203ENST00000588210 VPS16Q9H269 839 aa16.22■□□□□ 0.19
CCDC43-203ENST00000588210 ABHD16BQ9H3Z7 469 aa16.22■□□□□ 0.19
CCDC43-203ENST00000588210 PAK6Q9NQU5 681 aaPredicted RBP16.22■□□□□ 0.19
CCDC43-203ENST00000588210 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.22■□□□□ 0.19
CCDC43-203ENST00000588210 CCDC66A2RUB6 948 aa16.22■□□□□ 0.19
CCDC43-203ENST00000588210 CTAGE9A4FU28 777 aa16.22■□□□□ 0.19
CCDC43-203ENST00000588210 MYL1P05976 194 aa16.22■□□□□ 0.19
CCDC43-203ENST00000588210 HOXA13P31271 388 aaPredicted RBP16.22■□□□□ 0.19
CCDC43-203ENST00000588210 KCNB1Q14721 858 aa16.22■□□□□ 0.19
CCDC43-203ENST00000588210 TYW1BQ6NUM6 668 aa16.22■□□□□ 0.19
CCDC43-203ENST00000588210 ACRBPQ8NEB7 543 aa16.22■□□□□ 0.19
CCDC43-203ENST00000588210 RMDN3Q96TC7 470 aa16.22■□□□□ 0.19
CCDC43-203ENST00000588210 GLT8D2Q9H1C3 349 aa16.22■□□□□ 0.19
CCDC43-203ENST00000588210 GDAQ9Y2T3 454 aa16.22■□□□□ 0.19
CCDC43-203ENST00000588210 MEIS2O14770 477 aa16.21■□□□□ 0.19
CCDC43-203ENST00000588210 CCND3P30281 292 aaPredicted RBP16.21■□□□□ 0.19
CCDC43-203ENST00000588210 ARHGAP25P42331 645 aa16.21■□□□□ 0.19
CCDC43-203ENST00000588210 PRCPP42785 496 aa16.21■□□□□ 0.19
CCDC43-203ENST00000588210 PRAMEF19Q5SWL8 479 aa16.21■□□□□ 0.19
CCDC43-203ENST00000588210 GALNT17Q6IS24 598 aa16.21■□□□□ 0.19
CCDC43-203ENST00000588210 ADSSL1Q8N142 457 aa16.21■□□□□ 0.19
CCDC43-203ENST00000588210 MSANTD4Q8NCY6 345 aa16.21■□□□□ 0.19
CCDC43-203ENST00000588210 TRPV1Q8NER1 839 aa16.21■□□□□ 0.19
CCDC43-203ENST00000588210 CCDC148Q8NFR7 591 aa16.21■□□□□ 0.19
CCDC43-203ENST00000588210 IWS1Q96ST2 819 aa16.21■□□□□ 0.19
CCDC43-203ENST00000588210 FUT8Q9BYC5 575 aa16.21■□□□□ 0.19
CCDC43-203ENST00000588210 BRCA2P51587 3418 aa16.21■□□□□ 0.18
CCDC43-203ENST00000588210 SMCO2A6NFE2 343 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 GJB1P08034 283 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 EDNRBP24530 442 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 NAALADL2Q58DX5 795 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 ARHGEF16Q5VV41 709 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 USP17L6PQ6QN14 398 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 SLC35F6Q8N357 371 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 HNRNPLLQ8WVV9 542 aaKnown RBP16.2■□□□□ 0.18
CCDC43-203ENST00000588210 NAPGQ99747 312 aaPredicted RBP16.2■□□□□ 0.18
CCDC43-203ENST00000588210 RIC8AQ9NPQ8 531 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 PXMP2Q9NR77 195 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 CCDC194A0A1B0GVG4 234 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 A0A1W2PQC6 194 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 ESYT2A0FGR8 921 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 RNF225M0QZC1 329 aaPredicted RBP16.2■□□□□ 0.18
CCDC43-203ENST00000588210 LAD1O00515 517 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 SEPT4O43236 478 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 MSCO60682 206 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 ZNF865P0CJ78 1059 aaPredicted RBP16.2■□□□□ 0.18
CCDC43-203ENST00000588210 CAPN2P17655 700 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 EEF1GP26641 437 aaKnown RBP16.2■□□□□ 0.18
CCDC43-203ENST00000588210 CNGA1P29973 690 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 ACVR2BQ13705 512 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 DTHD1Q6ZMT9 781 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 CCSER1Q9C0I3 900 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 ZMYND12Q9H0C1 365 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 RAB21Q9UL25 225 aa16.2■□□□□ 0.18
CCDC43-203ENST00000588210 LGALS16A8MUM7 142 aa16.19■□□□□ 0.18
CCDC43-203ENST00000588210 OAS2P29728 719 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms