RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 MYL1P05976 194 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 CCDC192P0DO97 292 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 ATP4AP20648 1035 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 BMP6P22004 513 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 TCF7P36402 384 aaPredicted RBP12.61□□□□□ -0.39
VMP1-207ENST00000588131 NLRP12P59046 1061 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 MAP2K1Q02750 393 aaPredicted RBP12.61□□□□□ -0.39
VMP1-207ENST00000588131 TRIM32Q13049 653 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 MORC3Q14149 939 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 STX1AQ16623 288 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 DPCR1Q3MIW9 517 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 DUSP28Q4G0W2 176 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 ARSHQ5FYA8 562 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 IQSEC1Q6DN90 963 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 DYMQ7RTS9 669 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 GPBP1Q86WP2 473 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 TRPV1Q8NER1 839 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 SEPT1Q8WYJ6 367 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 LENG1Q96BZ8 264 aaPredicted RBP12.61□□□□□ -0.39
VMP1-207ENST00000588131 ERO1AQ96HE7 468 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 ZNF302Q9NR11 478 aa12.61□□□□□ -0.39
VMP1-207ENST00000588131 NOP56O00567 594 aaKnown RBP12.6□□□□□ -0.39
VMP1-207ENST00000588131 ELNP15502 786 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 YWHABP31946 246 aaKnown RBP12.6□□□□□ -0.39
VMP1-207ENST00000588131 ASIC1P78348 528 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 AMPD3Q01432 767 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 PRKCEQ02156 737 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 TNFAIP2Q03169 654 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 IRF5Q13568 498 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 LAMC2Q13753 1193 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 GSE1Q14687 1217 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 KMT5BQ4FZB7 885 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 ANO6Q4KMQ2 910 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 UTP14CQ5TAP6 766 aaKnown RBP12.6□□□□□ -0.39
VMP1-207ENST00000588131 PLA2G4FQ68DD2 849 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 CNNM4Q6P4Q7 775 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 C11orf57Q6ZUT1 292 aaPredicted RBP12.6□□□□□ -0.39
VMP1-207ENST00000588131 TRMT1LQ7Z2T5 733 aaKnown RBP12.6□□□□□ -0.39
VMP1-207ENST00000588131 OR6J1Q8NGC5 347 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 AFG1LQ8WV93 481 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 DDX12PQ92771 950 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 ATP6V0A1Q93050 837 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 EMID1Q96A84 441 aaPredicted RBP12.6□□□□□ -0.39
VMP1-207ENST00000588131 DNAJC19Q96DA6 116 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 GSDMAQ96QA5 445 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 SH2D3AQ9BRG2 576 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 RUSC1Q9BVN2 902 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 LRRC27Q9C0I9 530 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 DNAJC25Q9H1X3 360 aa12.6□□□□□ -0.39
VMP1-207ENST00000588131 DBR1Q9UK59 544 aaKnown RBP12.6□□□□□ -0.39
VMP1-207ENST00000588131 GNEQ9Y223 722 aaKnown RBP12.6□□□□□ -0.39
VMP1-207ENST00000588131 MAFBQ9Y5Q3 323 aaPredicted RBP12.6□□□□□ -0.39
VMP1-207ENST00000588131 NKRFO15226 690 aaKnown RBP eCLIP12.59□□□□□ -0.39
VMP1-207ENST00000588131 LGR5O75473 907 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 CYBAP13498 195 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 HOXD10P28358 340 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 RARRES1P49788 294 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 RAD51AP2Q09MP3 1159 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 MFSD14CQ5VZR4 134 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 FAM160B1Q5W0V3 765 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 RINT1Q6NUQ1 792 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 ANO5Q75V66 913 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 TRIM50Q86XT4 487 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 DNAJC5GQ8N7S2 189 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 TRIML1Q8N9V2 468 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 AFAP1L1Q8TED9 768 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 RBSNQ9H1K0 784 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 ANO10Q9NW15 660 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 WBP1LQ9NX94 342 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 EMSYQ7Z589 1322 aa12.59□□□□□ -0.39
VMP1-207ENST00000588131 ARHGEF35A5YM69 484 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 ADCY3O60266 1144 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 DKC1O60832 514 aaKnown RBP eCLIP12.58□□□□□ -0.4
VMP1-207ENST00000588131 GNRH1P01148 92 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 OATP04181 439 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 KRT18P05783 430 aaKnown RBP12.58□□□□□ -0.4
VMP1-207ENST00000588131 XRCC6P12956 609 aaKnown RBP eCLIP12.58□□□□□ -0.4
VMP1-207ENST00000588131 STAT5BP51692 787 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 NPEPPSP55786 919 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 IRX5P78411 483 aaPredicted RBP12.58□□□□□ -0.4
VMP1-207ENST00000588131 GIT2Q14161 759 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 KCNB1Q14721 858 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 XKR9Q5GH70 373 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 PADI6Q6TGC4 694 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 C1orf186Q6ZWK4 172 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 UNC13DQ70J99 1090 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 TRMT44Q8IYL2 757 aaKnown RBP12.58□□□□□ -0.4
VMP1-207ENST00000588131 PPTC7Q8NI37 304 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 HPS3Q969F9 1004 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 REEP2Q9BRK0 252 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 BEGAINQ9BUH8 593 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 POLD4Q9HCU8 107 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 ANKEF1Q9NU02 776 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 SEPT9Q9UHD8 586 aaPredicted RBP12.58□□□□□ -0.4
VMP1-207ENST00000588131 NRBP1Q9UHY1 535 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 FAM184BQ9ULE4 1060 aa12.58□□□□□ -0.4
VMP1-207ENST00000588131 PVALEFA0A1B0GWK0 134 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 FSD2A1L4K1 749 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 RSPH10B2B2RC85 870 aa12.57□□□□□ -0.4
VMP1-207ENST00000588131 DYNC1LI2O43237 492 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 242.6 ms