RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 TMEM62Q0P6H9 643 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 TRAF1Q13077 416 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 PAK2Q13177 524 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 MTMR3Q13615 1198 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 LLGL2Q6P1M3 1020 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 FRMD5Q7Z6J6 570 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 RTN4RL1Q86UN2 441 aaPredicted RBP9.86□□□□□ -0.83
SDF2-204ENST00000587338 THNSL1Q8IYQ7 743 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 CRIPAKQ8N1N5 446 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 TMEM105Q8N8V8 129 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 GLG1Q92896 1179 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 NKD2Q969F2 451 aaPredicted RBP9.86□□□□□ -0.83
SDF2-204ENST00000587338 RILPL2Q969X0 211 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 PIGSQ96S52 555 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 CDCA3Q99618 268 aaPredicted RBP9.86□□□□□ -0.83
SDF2-204ENST00000587338 FTHL17Q9BXU8 183 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 PLXNA4Q9HCM2 1894 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 ZSWIM5Q9P217 1185 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 MAD2L2Q9UI95 211 aa9.86□□□□□ -0.83
SDF2-204ENST00000587338 LAMA4Q16363 1823 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 FGF18O76093 207 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 BRD1O95696 1058 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 PDE1AP54750 535 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 UBE3AQ05086 875 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 SLC35G1Q2M3R5 365 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 MARCH8Q5T0T0 291 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 IER5Q5VY09 327 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 PLPP4Q5VZY2 271 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 ANKRD54Q6NXT1 300 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 SMC5Q8IY18 1101 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 ADSSL1Q8N142 457 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 PIBF1Q8WXW3 757 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 SENP7Q9BQF6 1050 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 LNPKQ9C0E8 428 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 S1PR5Q9H228 398 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 MFSD1Q9H3U5 465 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 AAASQ9NRG9 546 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 TMEM260Q9NX78 707 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 ERAP1Q9NZ08 941 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 PADI3Q9ULW8 664 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 TRPV2Q9Y5S1 764 aa9.85□□□□□ -0.83
SDF2-204ENST00000587338 BAZ2BQ9UIF8 2168 aaKnown RBP9.85□□□□□ -0.83
SDF2-204ENST00000587338 TPRP12270 2363 aaKnown RBP9.84□□□□□ -0.83
SDF2-204ENST00000587338 PALM3A6NDB9 673 aaPredicted RBP9.84□□□□□ -0.83
SDF2-204ENST00000587338 TBKBP1A7MCY6 615 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 ERVFC1P60507 584 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 APOBRQ0VD83 1088 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 TMEM266Q2M3C6 531 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 MCTP2Q6DN12 878 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 SYCE2Q6PIF2 218 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 NLRX1Q86UT6 975 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 UBALD2Q8IYN6 164 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 GIMAP8Q8ND71 665 aaPredicted RBP9.84□□□□□ -0.83
SDF2-204ENST00000587338 SMARCC2Q8TAQ2 1214 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 KRT23Q9C075 422 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 SMOC2Q9H3U7 446 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 PKD2L1Q9P0L9 805 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 HCSTQ9UBK5 93 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 CDH22Q9UJ99 828 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 SORCS3Q9UPU3 1222 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 NR2E1Q9Y466 385 aa9.84□□□□□ -0.83
SDF2-204ENST00000587338 IGSF9BQ9UPX0 1349 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 CEP250Q9BV73 2442 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 PNMA6FA0A0J9YX94 578 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 GSTTP1A0A1W2PQM5 241 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 C2CD4DB7Z1M9 353 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 FSCN2O14926 492 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 RPLP2P05387 115 aaKnown RBP9.83□□□□□ -0.84
SDF2-204ENST00000587338 SARSP49591 514 aaKnown RBP9.83□□□□□ -0.84
SDF2-204ENST00000587338 NUCB1Q02818 461 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 NFX1Q12986 1120 aaKnown RBP9.83□□□□□ -0.84
SDF2-204ENST00000587338 SEC23AQ15436 765 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 IMMTQ16891 758 aaKnown RBP9.83□□□□□ -0.84
SDF2-204ENST00000587338 PCNX4Q63HM2 1172 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 ASTLQ6HA08 431 aaPredicted RBP9.83□□□□□ -0.84
SDF2-204ENST00000587338 PDE12Q6L8Q7 609 aaKnown RBP9.83□□□□□ -0.84
SDF2-204ENST00000587338 CHD1LQ86WJ1 897 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 TICAM2Q86XR7 235 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 COLGALT1Q8NBJ5 622 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 SEPT1Q8WYJ6 367 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 TCF25Q9BQ70 676 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 TMX1Q9H3N1 280 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 SMARCAD1Q9H4L7 1026 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 CNNM2Q9H8M5 875 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 ENTPD7Q9NQZ7 604 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 GINS2Q9Y248 185 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 PCDHB7Q9Y5E2 793 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 SQORQ9Y6N5 450 aa9.83□□□□□ -0.84
SDF2-204ENST00000587338 DENND3A2RUS2 1198 aa9.82□□□□□ -0.84
SDF2-204ENST00000587338 RRN3P2A6NIE6 340 aa9.82□□□□□ -0.84
SDF2-204ENST00000587338 HIDE1A8MVS5 230 aa9.82□□□□□ -0.84
SDF2-204ENST00000587338 CYTH3O43739 400 aa9.82□□□□□ -0.84
SDF2-204ENST00000587338 MGEA5O60502 916 aa9.82□□□□□ -0.84
SDF2-204ENST00000587338 ATP9AO75110 1047 aa9.82□□□□□ -0.84
SDF2-204ENST00000587338 INSRRP14616 1297 aa9.82□□□□□ -0.84
SDF2-204ENST00000587338 KCNA2P16389 499 aa9.82□□□□□ -0.84
SDF2-204ENST00000587338 HOXB8P17481 243 aaPredicted RBP9.82□□□□□ -0.84
SDF2-204ENST00000587338 SDSP20132 328 aa9.82□□□□□ -0.84
SDF2-204ENST00000587338 KRT76Q01546 638 aa9.82□□□□□ -0.84
SDF2-204ENST00000587338 KCNC3Q14003 757 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms