RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 SESTD1Q86VW0 696 aa16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 BBXQ8WY36 941 aaPredicted RBP16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 RCOR1Q9UKL0 485 aa16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 NOD1Q9Y239 953 aa16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 SCN10AQ9Y5Y9 1956 aa16.34■□□□□ 0.21
SCAMP4-209ENST00000585335 C17orf102A2RUQ5 167 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 RRN3P2A6NIE6 340 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 DCDC2CA8MYV0 355 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 CUTAO60888 179 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 CTTNQ14247 550 aaKnown RBP16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 UGCGQ16739 394 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 ZNF484Q5JVG2 852 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 C4orf19Q8IY42 314 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 SLC43A3Q8NBI5 491 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 LEO1Q8WVC0 666 aaPredicted RBP16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 CALML4Q96GE6 196 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 HSD17B14Q9BPX1 270 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 NT5C3AQ9H0P0 336 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 CSRNP2Q9H175 543 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 RNPEPQ9H4A4 650 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 RGL1Q9NZL6 768 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 SEPT9Q9UHD8 586 aaPredicted RBP16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 NRCAMQ92823 1304 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 COL1A2P08123 1366 aa16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 MYH9P35579 1960 aaKnown RBP16.33■□□□□ 0.2
SCAMP4-209ENST00000585335 DDX11L8A8MPP1 907 aa16.32■□□□□ 0.2
SCAMP4-209ENST00000585335 SLITRK3O94933 977 aa16.32■□□□□ 0.2
SCAMP4-209ENST00000585335 LYPLA2O95372 231 aa16.32■□□□□ 0.2
SCAMP4-209ENST00000585335 RTP1P59025 263 aa16.32■□□□□ 0.2
SCAMP4-209ENST00000585335 SNX17Q15036 470 aa16.32■□□□□ 0.2
SCAMP4-209ENST00000585335 GRIK4Q16099 956 aa16.32■□□□□ 0.2
SCAMP4-209ENST00000585335 TRMT1LQ7Z2T5 733 aaKnown RBP16.32■□□□□ 0.2
SCAMP4-209ENST00000585335 CABP7Q86V35 215 aa16.32■□□□□ 0.2
SCAMP4-209ENST00000585335 KCTD17Q8N5Z5 321 aa16.32■□□□□ 0.2
SCAMP4-209ENST00000585335 ZNF579Q8NAF0 562 aaKnown RBP16.32■□□□□ 0.2
SCAMP4-209ENST00000585335 NACC1Q96RE7 527 aa16.32■□□□□ 0.2
SCAMP4-209ENST00000585335 HDAC6Q9UBN7 1215 aa16.32■□□□□ 0.2
SCAMP4-209ENST00000585335 GTF2IRD1Q9UHL9 959 aa16.32■□□□□ 0.2
SCAMP4-209ENST00000585335 ATP11BQ9Y2G3 1177 aa16.32■□□□□ 0.2
SCAMP4-209ENST00000585335 PPME1Q9Y570 386 aa16.32■□□□□ 0.2
SCAMP4-209ENST00000585335 GRIN2DO15399 1336 aa16.31■□□□□ 0.2
SCAMP4-209ENST00000585335 PP2D1A8MPX8 630 aa16.31■□□□□ 0.2
SCAMP4-209ENST00000585335 ZNF862O60290 1169 aa16.31■□□□□ 0.2
SCAMP4-209ENST00000585335 PQBP1O60828 265 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-209ENST00000585335 MED24O75448 989 aa16.31■□□□□ 0.2
SCAMP4-209ENST00000585335 INSRRP14616 1297 aa16.31■□□□□ 0.2
SCAMP4-209ENST00000585335 YWHABP31946 246 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-209ENST00000585335 CDK7P50613 346 aa16.31■□□□□ 0.2
SCAMP4-209ENST00000585335 ZRSR1Q15695 479 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-209ENST00000585335 LRRC26Q2I0M4 334 aa16.31■□□□□ 0.2
SCAMP4-209ENST00000585335 TRIM60Q495X7 471 aa16.31■□□□□ 0.2
SCAMP4-209ENST00000585335 CATSPER3Q86XQ3 398 aa16.31■□□□□ 0.2
SCAMP4-209ENST00000585335 EXOC8Q8IYI6 725 aa16.31■□□□□ 0.2
SCAMP4-209ENST00000585335 TOX2Q96NM4 488 aa16.31■□□□□ 0.2
SCAMP4-209ENST00000585335 CCDC39Q9UFE4 941 aa16.31■□□□□ 0.2
SCAMP4-209ENST00000585335 GOLGA6L4A6NEF3 574 aa16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 SPATA31C1P0DKV0 1188 aa16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 XRCC6P12956 609 aaKnown RBP eCLIP16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 ATP4AP20648 1035 aa16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 IGBP1P78318 339 aa16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 PTGISQ16647 500 aa16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 ANKRD33Q7Z3H0 272 aa16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 CCDC155Q8N6L0 562 aa16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 LMBR1Q8WVP7 490 aa16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 CLIC6Q96NY7 704 aa16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 JPH2Q9BR39 696 aaPredicted RBP16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 NIFKQ9BYG3 293 aaKnown RBP16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 CCSER1Q9C0I3 900 aa16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 ANKEF1Q9NU02 776 aa16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 SETD4Q9NVD3 440 aa16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 FAM13BQ9NYF5 915 aa16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 TUBE1Q9UJT0 475 aa16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 DNM3Q9UQ16 869 aa16.3■□□□□ 0.2
SCAMP4-209ENST00000585335 RPLP2P05387 115 aaKnown RBP16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 CDC25AP30304 524 aa16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 TLE2Q04725 743 aa16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 GRIN1Q05586 938 aa16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 MTERF2Q49AM1 385 aa16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 XKR9Q5GH70 373 aa16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 GDF6Q6KF10 455 aaPredicted RBP16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 POTEGQ6S5H5 508 aa16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 FAM126BQ8IXS8 530 aa16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 RETREG2Q8NC44 543 aa16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 SYMPKQ92797 1274 aaKnown RBP16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 CEP170P1Q96L14 293 aa16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 DDX19AQ9NUU7 478 aaKnown RBP16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 PCDHA7Q9UN72 937 aa16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 KIAA1024Q9UPX6 916 aa16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 WDR81Q562E7 1941 aa16.29■□□□□ 0.2
SCAMP4-209ENST00000585335 ARHGEF35A5YM69 484 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 MAGEB2O15479 319 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 EVI5O60447 810 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 HOXC8P31273 242 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 RFC5P40937 340 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 TBC1D8BQ0IIM8 1120 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 SPECC1Q5M775 1068 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 HYIQ5T013 277 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 PLA2G4FQ68DD2 849 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 TAF2Q6P1X5 1199 aa16.28■□□□□ 0.2
SCAMP4-209ENST00000585335 ANO5Q75V66 913 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms