RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 TBX10O75333 385 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 CSPG5O95196 566 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 ITGB1P05556 798 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 SCG2P13521 617 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 MCM5P33992 734 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 SLC26A2P50443 739 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 STAT5BP51692 787 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 ANTXR2P58335 489 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 UBE3AQ05086 875 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 DLX2Q07687 328 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 MARCH8Q5T0T0 291 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 SYNE3Q6ZMZ3 975 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 PLPPR4Q7Z2D5 763 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 BMP8AQ7Z5Y6 402 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 KLHL23Q8NBE8 558 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 SPPL3Q8TCT6 385 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 MICAL1Q8TDZ2 1067 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 POF1BQ8WVV4 589 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 MYL10Q9BUA6 226 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 CELF4Q9BZC1 486 aaKnown RBP12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 AGO3Q9H9G7 860 aaKnown RBP12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 LY9Q9HBG7 655 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 PADI3Q9ULW8 664 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 PCDHA6Q9UN73 950 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 PCDHB7Q9Y5E2 793 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 PCDHB12Q9Y5F1 795 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 PCDHA8Q9Y5H6 950 aa12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 MRPL42Q9Y6G3 142 aaKnown RBP12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 BAZ2BQ9UIF8 2168 aaKnown RBP12.25□□□□□ -0.45
CSNK1D-226ENST00000585026 SMIM35A0A1B0GVV1 85 aa12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 PRC1O43663 620 aa12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 FOSP01100 380 aaPredicted RBP12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 SRGAP2BP0DMP2 458 aa12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 KRT76Q01546 638 aa12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 COASYQ13057 564 aa12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 SPOUT1Q5T280 376 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 PDE12Q6L8Q7 609 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 SUGP1Q8IWZ8 645 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 SRBD1Q8N5C6 995 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 SMRP1Q8NCR6 262 aa12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 MSLNLQ96KJ4 702 aa12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 CDCA3Q99618 268 aaPredicted RBP12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 MXRA8Q9BRK3 442 aa12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 LSG1Q9H089 658 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 C1orf112Q9NSG2 853 aa12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 IGSF9BQ9UPX0 1349 aa12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 KDM3AQ9Y4C1 1321 aa12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 SLC12A7Q9Y666 1083 aa12.24□□□□□ -0.45
CSNK1D-226ENST00000585026 RALGAPA2Q2PPJ7 1873 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 NFASCO94856 1347 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 RBAK-RBAKDNI3L0D1 243 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 LINC01565O15544 149 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 PLEKHA8P1O95397 391 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 GTF2F1P35269 517 aaKnown RBP eCLIP12.23□□□□□ -0.451e-7■■■■■ 38.7
CSNK1D-226ENST00000585026 ANP32AP39687 249 aaKnown RBP12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 LIFRP42702 1097 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 NRIP1P48552 1158 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 PTPN5P54829 565 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 ACTR2P61160 394 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 NFX1Q12986 1120 aaKnown RBP12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 CAMK1Q14012 370 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 PLCB4Q15147 1175 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 UBE2SQ16763 222 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 PAN2Q504Q3 1202 aaKnown RBP12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 FAM160B1Q5W0V3 765 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 TRIM67Q6ZTA4 783 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 HEATR3Q7Z4Q2 680 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 RTN4RL1Q86UN2 441 aaPredicted RBP12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 PBXIP1Q96AQ6 731 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 PHF7Q9BWX1 381 aaPredicted RBP12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 GLT8D2Q9H1C3 349 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 TLE6Q9H808 572 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 KCNH7Q9NS40 1196 aa12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 RBM8AQ9Y5S9 174 aaKnown RBP12.23□□□□□ -0.45
CSNK1D-226ENST00000585026 TTC3P53804 2025 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 KAT6AQ92794 2004 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 DENND3A2RUS2 1198 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 TMEM221A6NGB7 291 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 M0R296 226 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 SH2B2O14492 632 aaPredicted RBP12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 GPR182O15218 404 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 HBP1O60381 514 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 RPS6KA5O75582 802 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 SARSP49591 514 aaKnown RBP12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 TMEM62Q0P6H9 643 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 MTHFD1LQ6UB35 978 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 RBM23Q86U06 439 aaKnown RBP12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 CRIPAKQ8N1N5 446 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 FANCBQ8NB91 859 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 LINC01599Q8WXQ3 324 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 PCYT2Q99447 389 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 IRF2BPLQ9H1B7 796 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 TLR9Q9NR96 1032 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 PUF60Q9UHX1 559 aaKnown RBP12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 GINS2Q9Y248 185 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 TAF6LQ9Y6J9 622 aa12.22□□□□□ -0.45
CSNK1D-226ENST00000585026 LOC730098B7Z3J9 87 aa12.21□□□□□ -0.45
CSNK1D-226ENST00000585026 hCG_1984214I3L0E3 225 aa12.21□□□□□ -0.45
CSNK1D-226ENST00000585026 BACH1O14867 736 aa12.21□□□□□ -0.45
CSNK1D-226ENST00000585026 PPFIA3O75145 1194 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms