RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 PRCPP42785 496 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CHMP4BP1P59074 171 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 GRB10Q13322 594 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 MTF1Q14872 753 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 XRRA1Q6P2D8 792 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 SMYD4Q8IYR2 804 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 GIMAP8Q8ND71 665 aaPredicted RBP16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 DNERQ8NFT8 737 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 LRRC15Q8TF66 581 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 CDK5RAP3Q96JB5 506 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PNMA5Q96PV4 448 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 BLZF1Q9H2G9 400 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 MROH8Q9H579 483 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 PKD2L1Q9P0L9 805 aa16.59■□□□□ 0.25
CDK5RAP3-236ENST00000584991 IPO5O00410 1097 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 IGF2BP3O00425 579 aaKnown RBP eCLIP16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 GAS7O60861 476 aa16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 CCT6AP40227 531 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 DNM2P50570 870 aa16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 MTMR1Q13613 665 aa16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 TSR1Q2NL82 804 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 OTOP1Q7RTM1 612 aa16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 FAM114A1Q8IWE2 563 aa16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 MSANTD4Q8NCY6 345 aa16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 SHCBP1Q8NEM2 672 aa16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 OR8K1Q8NGG5 319 aa16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 CPLX3Q8WVH0 158 aa16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 MMP19Q99542 508 aa16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 PARD6BQ9BYG5 372 aa16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 EFCC1Q9HA90 598 aa16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 RAB21Q9UL25 225 aa16.58■□□□□ 0.24
CDK5RAP3-236ENST00000584991 ASTN1O14525 1302 aa16.57■□□□□ 0.24
CDK5RAP3-236ENST00000584991 BICDL2A1A5D9 508 aa16.57■□□□□ 0.24
CDK5RAP3-236ENST00000584991 LGALS16A8MUM7 142 aa16.57■□□□□ 0.24
CDK5RAP3-236ENST00000584991 FAM155AB1AL88 458 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-236ENST00000584991 ALDH5A1P51649 535 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-236ENST00000584991 CCNA1P78396 465 aa16.57■□□□□ 0.24
CDK5RAP3-236ENST00000584991 AMPD3Q01432 767 aa16.57■□□□□ 0.24
CDK5RAP3-236ENST00000584991 ECM1Q16610 540 aa16.57■□□□□ 0.24
CDK5RAP3-236ENST00000584991 DNAJC7Q99615 494 aa16.57■□□□□ 0.24
CDK5RAP3-236ENST00000584991 NAPGQ99747 312 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-236ENST00000584991 TEKT3Q9BXF9 490 aa16.57■□□□□ 0.24
CDK5RAP3-236ENST00000584991 HAUS4Q9H6D7 363 aa16.57■□□□□ 0.24
CDK5RAP3-236ENST00000584991 AGO4Q9HCK5 861 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-236ENST00000584991 LZTFL1Q9NQ48 299 aa16.57■□□□□ 0.24
CDK5RAP3-236ENST00000584991 MORF4L1Q9UBU8 362 aa16.57■□□□□ 0.24
CDK5RAP3-236ENST00000584991 SOWAHBA6NEL2 793 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 ERLIN1O75477 346 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 TBC1D8O95759 1140 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 PGK2P07205 417 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 KRT9P35527 623 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 UBXN1Q04323 297 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 KCTD2Q14681 263 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 ZNF569Q5MCW4 686 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 FAM133AQ8N9E0 248 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 CCDC102AQ96A19 550 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 IWS1Q96ST2 819 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 GBP3Q9H0R5 595 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 VPS16Q9H269 839 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 MAGEC2Q9UBF1 373 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 CAPN11Q9UMQ6 739 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 DDX39AO00148 427 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 EML1O00423 815 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 CHMP2AO43633 222 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 FCER1AP12319 257 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 FSTL1Q12841 308 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 PPP2R5CQ13362 524 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 TMEM119Q4V9L6 283 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 NLRX1Q86UT6 975 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 EHBP1Q8NDI1 1231 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 ZNF507Q8TCN5 953 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 RIT2Q99578 217 aa16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 LUC7L2Q9Y383 392 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 EPN1Q9Y6I3 576 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-236ENST00000584991 PLXNB2O15031 1838 aa16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 KLRC4O43908 158 aa16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 MED24O75448 989 aa16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 KRT83P78385 493 aa16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 GPS2Q13227 327 aa16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 STXBP2Q15833 593 aa16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 FIGNQ5HY92 759 aa16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 HYIQ5T013 277 aa16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 HAUS3Q68CZ6 603 aa16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 IRF2BP1Q8IU81 584 aa16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 ERMNQ8TAM6 284 aa16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 INPP4AQ96PE3 977 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 C7orf25Q9BPX7 421 aa16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 UNC45AQ9H3U1 944 aa16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 BLOC1S4Q9NUP1 217 aa16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 ZHX1Q9UKY1 873 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 KDM3AQ9Y4C1 1321 aa16.55■□□□□ 0.24
CDK5RAP3-236ENST00000584991 POTEB3A0JP26 581 aa16.54■□□□□ 0.24
CDK5RAP3-236ENST00000584991 DHX15O43143 795 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-236ENST00000584991 ATP9AO75110 1047 aa16.54■□□□□ 0.24
CDK5RAP3-236ENST00000584991 STAM2O75886 525 aa16.54■□□□□ 0.24
CDK5RAP3-236ENST00000584991 RGS20O76081 388 aa16.54■□□□□ 0.24
CDK5RAP3-236ENST00000584991 CDK17Q00537 523 aa16.54■□□□□ 0.24
CDK5RAP3-236ENST00000584991 GRM1Q13255 1194 aa16.54■□□□□ 0.24
CDK5RAP3-236ENST00000584991 ITGB3BPQ13352 177 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms