RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	AOAH	P28039	575 aa		4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	SMARCA2	P51531	1590 aa		4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	IL13RA1	P78552	427 aa		4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	STIL	Q15468	1287 aa		4.59	□□□□□ -1.67
VAPA-208	ENST00000584796		Q6ZSN1	163 aa		4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	CXXC5	Q7LFL8	322 aa	Known RBP	4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	POLN	Q7Z5Q5	900 aa		4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	MTDH	Q86UE4	582 aa	Known RBP	4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	FBXW5	Q969U6	566 aa		4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	DPYSL5	Q9BPU6	564 aa		4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	TRIM55	Q9BYV6	548 aa		4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	MSL2	Q9HCI7	577 aa		4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	INCENP	Q9NQS7	918 aa		4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	BTBD7	Q9P203	1132 aa		4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	ING1	Q9UK53	422 aa	Predicted RBP	4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	FBXO10	Q9UK96	956 aa		4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	PCDHA8	Q9Y5H6	950 aa		4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	ATP23	Q9Y6H3	246 aa		4.59	□□□□□ -1.67
VAPA-208	ENST00000584796	DCAF1	Q9Y4B6	1507 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	TRBV23-1	A0A0A0MS06	115 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	NPIPB8	E9PQR5	432 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	ZNF561-AS1	K7EIQ3	104 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	OVOL3	O00110	214 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	PDPK1	O15530	556 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	C4BPA	P04003	597 aa	Known RBP	4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	HERVK_113	P62684	666 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	SUMO1	P63165	101 aa	Known RBP	4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	RASGRF1	Q13972	1273 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	WDR72	Q3MJ13	1102 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	USP39	Q53GS9	565 aa	Known RBP	4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	C16orf59	Q7L2K0	433 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	OSTM1	Q86WC4	334 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	PTRH1	Q86Y79	214 aa	Known RBP	4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	CFHR4	Q92496	578 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	WNK4	Q96J92	1243 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	IGSF5	Q9NSI5	407 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	CATSPERZ	Q9NTU4	200 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	GALNT8	Q9NY28	637 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	CBLC	Q9ULV8	474 aa		4.58	□□□□□ -1.68
VAPA-208	ENST00000584796	PLSCR1	O15162	318 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	ARHGAP6	O43182	974 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	CDC14B	O60729	498 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	CLASP2	O75122	1294 aa	Known RBP	4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	MPIG6B	O95866	241 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	HMGCR	P04035	888 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	PYGM	P11217	842 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	NAT1	P18440	290 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	ACO1	P21399	889 aa	Known RBP	4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	RRAD	P55042	308 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	JAM2	P57087	298 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	NOLC1	Q14978	699 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	EIF4H	Q15056	248 aa	Known RBP	4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	TBR1	Q16650	682 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	NRN1L	Q496H8	165 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	FOXB2	Q5VYV0	432 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	MAMDC4	Q6UXC1	1216 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	ZNF428	Q96B54	188 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	CDC6	Q99741	560 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	PLA2G12B	Q9BX93	195 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	ZNF341	Q9BYN7	854 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	SMURF1	Q9HCE7	757 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	NR2E1	Q9Y466	385 aa		4.57	□□□□□ -1.68
VAPA-208	ENST00000584796	MC4R	P32245	332 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	RPS19	P39019	145 aa	Known RBP	4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	GABRE	P78334	506 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	LACTB	P83111	547 aa	Predicted RBP	4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	GUCY1A3	Q02108	690 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	SSRP1	Q08945	709 aa	Known RBP	4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	MTERF2	Q49AM1	385 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	FAM209A	Q5JX71	171 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	KANK2	Q63ZY3	851 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	TRIM68	Q6AZZ1	485 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	IGFL4	Q6B9Z1	124 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	CKAP2L	Q8IYA6	745 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	EXTL1	Q92935	676 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	FAM89A	Q96GI7	184 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	EXOC2	Q96KP1	924 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	OR14A2	Q96R54	314 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	BTBD2	Q9BX70	525 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	KIAA1683	Q9H0B3	1180 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	CCDC113	Q9H0I3	377 aa		4.56	□□□□□ -1.68
VAPA-208	ENST00000584796	CCDC66	A2RUB6	948 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	PRAMEF25	A6NGN4	478 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	GSTA4	O15217	222 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	STK10	O94804	968 aa	Known RBP	4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	ZNF202	O95125	648 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	KRT15	P19012	456 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	ADCY8	P40145	1251 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	KCNQ1	P51787	676 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	ST5	P78524	1137 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	PTH1R	Q03431	593 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	SEC23A	Q15436	765 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	CRY1	Q16526	586 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	FAM47C	Q5HY64	1035 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	CRB2	Q5IJ48	1285 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	NBPF6	Q5VWK0	638 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	TMEM200B	Q69YZ2	307 aa		4.55	□□□□□ -1.68
VAPA-208	ENST00000584796	USP30	Q70CQ3	517 aa		4.55	□□□□□ -1.68

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