RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 CCDC171Q6TFL3 1326 aa13.22□□□□□ -0.29
NUP85-224ENST00000583948 IGBP1P78318 339 aa13.22□□□□□ -0.29
NUP85-224ENST00000583948 PTH1RQ03431 593 aa13.22□□□□□ -0.29
NUP85-224ENST00000583948 MCMDC2Q4G0Z9 681 aa13.22□□□□□ -0.29
NUP85-224ENST00000583948 SPOUT1Q5T280 376 aaKnown RBP13.22□□□□□ -0.29
NUP85-224ENST00000583948 FAM102BQ5T8I3 360 aa13.22□□□□□ -0.29
NUP85-224ENST00000583948 ZNF589Q86UQ0 364 aaPredicted RBP13.22□□□□□ -0.29
NUP85-224ENST00000583948 VSIG10LQ86VR7 867 aa13.22□□□□□ -0.29
NUP85-224ENST00000583948 FCHSD1Q86WN1 690 aa13.22□□□□□ -0.29
NUP85-224ENST00000583948 TICAM2Q86XR7 235 aa13.22□□□□□ -0.29
NUP85-224ENST00000583948 CMTR2Q8IYT2 770 aaKnown RBP13.22□□□□□ -0.29
NUP85-224ENST00000583948 GPR20Q99678 358 aa13.22□□□□□ -0.29
NUP85-224ENST00000583948 JMJD4Q9H9V9 463 aa13.22□□□□□ -0.29
NUP85-224ENST00000583948 HELLSQ9NRZ9 838 aa13.22□□□□□ -0.29
NUP85-224ENST00000583948 TMEM260Q9NX78 707 aa13.22□□□□□ -0.29
NUP85-224ENST00000583948 DAXXQ9UER7 740 aaPredicted RBP13.22□□□□□ -0.29
NUP85-224ENST00000583948 CHD8Q9HCK8 2581 aa13.21□□□□□ -0.29
NUP85-224ENST00000583948 EPB41L2O43491 1005 aaKnown RBP13.21□□□□□ -0.29
NUP85-224ENST00000583948 DHX16O60231 1041 aaKnown RBP13.21□□□□□ -0.29
NUP85-224ENST00000583948 MGEA5O60502 916 aa13.21□□□□□ -0.29
NUP85-224ENST00000583948 FGF18O76093 207 aa13.21□□□□□ -0.29
NUP85-224ENST00000583948 FGRP09769 529 aa13.21□□□□□ -0.29
NUP85-224ENST00000583948 HSPD1P10809 573 aaKnown RBP13.21□□□□□ -0.29
NUP85-224ENST00000583948 TBC1D10CQ8IV04 446 aa13.21□□□□□ -0.29
NUP85-224ENST00000583948 STAG2Q8N3U4 1231 aa13.21□□□□□ -0.29
NUP85-224ENST00000583948 FAM49AQ9H0Q0 323 aaPredicted RBP13.21□□□□□ -0.29
NUP85-224ENST00000583948 TMX1Q9H3N1 280 aa13.21□□□□□ -0.29
NUP85-224ENST00000583948 ANAPC4Q9UJX5 808 aa13.21□□□□□ -0.29
NUP85-224ENST00000583948 NOP56O00567 594 aaKnown RBP13.2□□□□□ -0.3
NUP85-224ENST00000583948 FSCN2O14926 492 aa13.2□□□□□ -0.3
NUP85-224ENST00000583948 FGAP02671 866 aa13.2□□□□□ -0.3
NUP85-224ENST00000583948 HSD17B4P51659 736 aa13.2□□□□□ -0.3
NUP85-224ENST00000583948 NUBP1P53384 320 aa13.2□□□□□ -0.3
NUP85-224ENST00000583948 MRPS9P82933 396 aaKnown RBP13.2□□□□□ -0.3
NUP85-224ENST00000583948 BECN1Q14457 450 aa13.2□□□□□ -0.3
NUP85-224ENST00000583948 RSPO4Q2I0M5 234 aaPredicted RBP13.2□□□□□ -0.3
NUP85-224ENST00000583948 PPP4R3BQ5MIZ7 849 aa13.2□□□□□ -0.3
NUP85-224ENST00000583948 MARCH8Q5T0T0 291 aa13.2□□□□□ -0.3
NUP85-224ENST00000583948 MCTP2Q6DN12 878 aa13.2□□□□□ -0.3
NUP85-224ENST00000583948 TRAPPC12Q8WVT3 735 aa13.2□□□□□ -0.3
NUP85-224ENST00000583948 HINFPQ9BQA5 517 aa13.2□□□□□ -0.3
NUP85-224ENST00000583948 AAASQ9NRG9 546 aa13.2□□□□□ -0.3
NUP85-224ENST00000583948 RBM8AQ9Y5S9 174 aaKnown RBP13.2□□□□□ -0.3
NUP85-224ENST00000583948 NEDD4P46934 1319 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 USP24Q9UPU5 2620 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 GPR179Q6PRD1 2367 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 TBKBP1A7MCY6 615 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 NARSO43776 548 aaKnown RBP13.19□□□□□ -0.3
NUP85-224ENST00000583948 CAND2O75155 1236 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 RABEP1Q15276 862 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 SLC35G1Q2M3R5 365 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 RARS2Q5T160 578 aaKnown RBP13.19□□□□□ -0.3
NUP85-224ENST00000583948 TSHZ1Q6ZSZ6 1077 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 MCF2L2Q86YR7 1114 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 NPAS4Q8IUM7 802 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 CCDC105Q8IYK2 499 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 UBALD2Q8IYN6 164 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 DTWD2Q8NBA8 298 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 ST13P5Q8NFI4 369 aaPredicted RBP13.19□□□□□ -0.3
NUP85-224ENST00000583948 CYP2W1Q8TAV3 490 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 KIF2CQ99661 725 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 ERVK-5Q9HDB9 667 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 TCP11L1Q9NUJ3 509 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 TYW1Q9NV66 732 aaKnown RBP13.19□□□□□ -0.3
NUP85-224ENST00000583948 PADI3Q9ULW8 664 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 MRPL11Q9Y3B7 192 aaKnown RBP13.19□□□□□ -0.3
NUP85-224ENST00000583948 BAZ2BQ9UIF8 2168 aaKnown RBP13.19□□□□□ -0.3
NUP85-224ENST00000583948 OTOGLQ3ZCN5 2332 aa13.19□□□□□ -0.3
NUP85-224ENST00000583948 LMNAP02545 664 aaKnown RBP13.18□□□□□ -0.3
NUP85-224ENST00000583948 FGFR1P11362 822 aa13.18□□□□□ -0.3
NUP85-224ENST00000583948 SCG2P13521 617 aa13.18□□□□□ -0.3
NUP85-224ENST00000583948 HSPA4P34932 840 aa13.18□□□□□ -0.3
NUP85-224ENST00000583948 CLCN5P51795 746 aa13.18□□□□□ -0.3
NUP85-224ENST00000583948 NAALADL2Q58DX5 795 aa13.18□□□□□ -0.3
NUP85-224ENST00000583948 STOX1Q6ZVD7 989 aa13.18□□□□□ -0.3
NUP85-224ENST00000583948 HSCBQ8IWL3 235 aa13.18□□□□□ -0.3
NUP85-224ENST00000583948 THNSL1Q8IYQ7 743 aa13.18□□□□□ -0.3
NUP85-224ENST00000583948 COLGALT1Q8NBJ5 622 aa13.18□□□□□ -0.3
NUP85-224ENST00000583948 TCF25Q9BQ70 676 aa13.18□□□□□ -0.3
NUP85-224ENST00000583948 CDHR5Q9HBB8 845 aa13.18□□□□□ -0.3
NUP85-224ENST00000583948 COL4A3Q01955 1670 aa13.18□□□□□ -0.3
NUP85-224ENST00000583948 AOC1P19801 751 aa13.17□□□□□ -0.3
NUP85-224ENST00000583948 ANAPC15P60006 121 aa13.17□□□□□ -0.3
NUP85-224ENST00000583948 MRPS6P82932 125 aaKnown RBP13.17□□□□□ -0.3
NUP85-224ENST00000583948 PUM1Q14671 1186 aaKnown RBP eCLIP13.17□□□□□ -0.3
NUP85-224ENST00000583948 GRIK4Q16099 956 aa13.17□□□□□ -0.3
NUP85-224ENST00000583948 SPECC1Q5M775 1068 aa13.17□□□□□ -0.3
NUP85-224ENST00000583948 TMEM184AQ6ZMB5 413 aa13.17□□□□□ -0.3
NUP85-224ENST00000583948 SIX5Q8N196 739 aa13.17□□□□□ -0.3
NUP85-224ENST00000583948 PNMA1Q8ND90 353 aa13.17□□□□□ -0.3
NUP85-224ENST00000583948 AUTS2Q8WXX7 1259 aa13.17□□□□□ -0.3
NUP85-224ENST00000583948 MAP4K1Q92918 833 aa13.17□□□□□ -0.3
NUP85-224ENST00000583948 PPP1R16BQ96T49 567 aa13.17□□□□□ -0.3
NUP85-224ENST00000583948 CWH43Q9H720 699 aa13.17□□□□□ -0.3
NUP85-224ENST00000583948 ENTPD7Q9NQZ7 604 aa13.17□□□□□ -0.3
NUP85-224ENST00000583948 PKD2L1Q9P0L9 805 aa13.17□□□□□ -0.3
NUP85-224ENST00000583948 GNAT1P11488 350 aa13.16□□□□□ -0.3
NUP85-224ENST00000583948 CCND2P30279 289 aa13.16□□□□□ -0.3
NUP85-224ENST00000583948 PPFIA1Q13136 1202 aa13.16□□□□□ -0.3
NUP85-224ENST00000583948 GPATCH4Q5T3I0 446 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms