RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 ZC3H6P61129 1189 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 ST5P78524 1137 aa6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 HS1BP3Q53T59 392 aa6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 DPP8Q6V1X1 898 aaPredicted RBP6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 EP400NLQ6ZTU2 488 aa6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 C16orf59Q7L2K0 433 aa6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 CISD2Q8N5K1 135 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 IPO9Q96P70 1041 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 KRTAP17-1Q9BYP8 105 aa6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 KIAA1683Q9H0B3 1180 aa6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 CCDC113Q9H0I3 377 aa6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 INCENPQ9NQS7 918 aa6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 BTBD7Q9P203 1132 aa6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 OAZ3Q9UMX2 235 aa6.38□□□□□ -1.39
SMCHD1-208ENST00000583344 FZD7O75084 574 aa6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 CRTAMO95727 393 aa6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 AOAHP28039 575 aa6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 GJA4P35212 333 aa6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 ETV4P43268 484 aa6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 KCNQ1P51787 676 aa6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 HMGA2P52926 109 aa6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 GABREP78334 506 aa6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 PRKD1Q15139 912 aaPredicted RBP6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 SEC23AQ15436 765 aa6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 CRY1Q16526 586 aa6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 TBR1Q16650 682 aa6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 FSTL4Q6MZW2 842 aa6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 ZC3H7AQ8IWR0 971 aaKnown RBP6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 MRPS23Q9Y3D9 190 aaKnown RBP6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 HS3ST3A1Q9Y663 406 aa6.37□□□□□ -1.39
SMCHD1-208ENST00000583344 KDM2BQ8NHM5 1336 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 MATN2O00339 956 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 SUV39H1O43463 412 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 MPIG6BO95866 241 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 HMGCRP04035 888 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 COMTP21964 271 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 TM4SF20Q53R12 229 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 ZMAT1Q5H9K5 638 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 FAM47CQ5HY64 1035 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 LRSAM1Q6UWE0 723 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 LARP4Q71RC2 724 aaKnown RBP eCLIP6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 OR14A2Q96R54 314 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 DHRS4Q9BTZ2 278 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 MRIQ9BWK5 157 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 ZDHHC5Q9C0B5 715 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 TANGO6Q9C0B7 1094 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 GALNT8Q9NY28 637 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 CDC42EP3Q9UKI2 254 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 NR2E1Q9Y466 385 aa6.36□□□□□ -1.39
SMCHD1-208ENST00000583344 CYR61O00622 381 aa6.35□□□□□ -1.39
SMCHD1-208ENST00000583344 CDC14BO60729 498 aa6.35□□□□□ -1.39
SMCHD1-208ENST00000583344 MMEP08473 750 aa6.35□□□□□ -1.39
SMCHD1-208ENST00000583344 CR2P20023 1033 aa6.35□□□□□ -1.39
SMCHD1-208ENST00000583344 KLF10Q13118 480 aa6.35□□□□□ -1.39
SMCHD1-208ENST00000583344 AGBL4Q5VU57 503 aa6.35□□□□□ -1.39
SMCHD1-208ENST00000583344 AMNQ9BXJ7 453 aa6.35□□□□□ -1.39
SMCHD1-208ENST00000583344 ZNF341Q9BYN7 854 aa6.35□□□□□ -1.39
SMCHD1-208ENST00000583344 SLC52A2Q9HAB3 445 aa6.35□□□□□ -1.39
SMCHD1-208ENST00000583344 UCKL1Q9NWZ5 548 aa6.35□□□□□ -1.39
SMCHD1-208ENST00000583344 NDOR1Q9UHB4 597 aa6.35□□□□□ -1.39
SMCHD1-208ENST00000583344 ING1Q9UK53 422 aaPredicted RBP6.35□□□□□ -1.39
SMCHD1-208ENST00000583344 FAM221BA6H8Z2 402 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 SCDO00767 359 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 CLASP2O75122 1294 aaKnown RBP6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 RAD17O75943 681 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 RASGRP1O95267 797 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 NAT1P18440 290 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 ATP2B1P20020 1258 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 ACO1P21399 889 aaKnown RBP6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 RASA3Q14644 834 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 NRN1LQ496H8 165 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 NBPF6Q5VWK0 638 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 RNF207Q6ZRF8 634 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 USP51Q70EK9 711 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 OTOP2Q7RTS6 562 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 NOSTRINQ8IVI9 506 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 SCYL1Q96KG9 808 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 NBPF4Q96M43 638 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 PLA2G12BQ9BX93 195 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 PCED1AQ9H1Q7 454 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 C12orf65Q9H3J6 166 aaKnown RBP6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 SIRPGQ9P1W8 387 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 COQ6Q9Y2Z9 468 aa6.34□□□□□ -1.39
SMCHD1-208ENST00000583344 GSTA4O15217 222 aa6.33□□□□□ -1.4
SMCHD1-208ENST00000583344 ARHGAP6O43182 974 aa6.33□□□□□ -1.4
SMCHD1-208ENST00000583344 GTF2F1P35269 517 aaKnown RBP eCLIP6.33□□□□□ -1.4
SMCHD1-208ENST00000583344 HERVK_113P62684 666 aa6.33□□□□□ -1.4
SMCHD1-208ENST00000583344 LACTBP83111 547 aaPredicted RBP6.33□□□□□ -1.4
SMCHD1-208ENST00000583344 CD83Q01151 205 aa6.33□□□□□ -1.4
SMCHD1-208ENST00000583344 DUSP8Q13202 625 aa6.33□□□□□ -1.4
SMCHD1-208ENST00000583344 STILQ15468 1287 aa6.33□□□□□ -1.4
SMCHD1-208ENST00000583344 USP39Q53GS9 565 aaKnown RBP6.33□□□□□ -1.4
SMCHD1-208ENST00000583344 Q6ZSN1 163 aa6.33□□□□□ -1.4
SMCHD1-208ENST00000583344 CFHR4Q92496 578 aa6.33□□□□□ -1.4
SMCHD1-208ENST00000583344 EDAQ92838 391 aa6.33□□□□□ -1.4
SMCHD1-208ENST00000583344 WNK4Q96J92 1243 aa6.33□□□□□ -1.4
SMCHD1-208ENST00000583344 SLC30A1Q9Y6M5 507 aa6.33□□□□□ -1.4
SMCHD1-208ENST00000583344 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.32□□□□□ -1.4
SMCHD1-208ENST00000583344 NPIPB8E9PQR5 432 aa6.32□□□□□ -1.4
SMCHD1-208ENST00000583344 E9PSI1 815 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms