RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 CEP55Q53EZ4 464 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 MUM1L1Q5H9M0 696 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 SYNCQ9H7C4 482 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.35□□□□□ -1.39
RTTN-209ENST00000583043 GCNT4Q9P109 453 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 AHDC1Q5TGY3 1603 aaPredicted RBP6.35□□□□□ -1.39
RTTN-209ENST00000583043 HEXIM1O94992 359 aaKnown RBP6.35□□□□□ -1.39
RTTN-209ENST00000583043 EEF2P13639 858 aaKnown RBP6.35□□□□□ -1.39
RTTN-209ENST00000583043 AKR1B1P15121 316 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 SREBF1P36956 1147 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 NSFP46459 744 aaKnown RBP6.35□□□□□ -1.39
RTTN-209ENST00000583043 RASSF2P50749 326 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 SLC8A3P57103 927 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 PSMC5P62195 406 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 ADCY2Q08462 1091 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 KCNH2Q12809 1159 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 XKR9Q5GH70 373 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 ANKRD40Q6AI12 368 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 RSRC2Q7L4I2 434 aaKnown RBP6.35□□□□□ -1.39
RTTN-209ENST00000583043 SMYD4Q8IYR2 804 aaPredicted RBP6.35□□□□□ -1.39
RTTN-209ENST00000583043 UBLCP1Q8WVY7 318 aaPredicted RBP6.35□□□□□ -1.39
RTTN-209ENST00000583043 WNT8AQ9H1J5 351 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 JMJD4Q9H9V9 463 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 CYP3A7-CYP3A51PA0A087WV96 503 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 LRRC53A6NM62 1247 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 C19orf81C9J6K1 198 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 ECE2O60344 883 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 CYP3A7P24462 503 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 FUT2Q10981 343 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 GRM1Q13255 1194 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 USH1GQ495M9 461 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 CRY2Q49AN0 593 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 RNF187Q5TA31 235 aaPredicted RBP6.35□□□□□ -1.39
RTTN-209ENST00000583043 GBP7Q8N8V2 638 aaPredicted RBP6.35□□□□□ -1.39
RTTN-209ENST00000583043 SYT2Q8N9I0 419 aaPredicted RBP6.35□□□□□ -1.39
RTTN-209ENST00000583043 IPO4Q8TEX9 1081 aaKnown RBP6.35□□□□□ -1.39
RTTN-209ENST00000583043 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.35□□□□□ -1.39
RTTN-209ENST00000583043 TCHPQ9BT92 498 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 TUBB6Q9BUF5 446 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 NBPF3Q9H094 633 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 PDE11AQ9HCR9 933 aa6.35□□□□□ -1.39
RTTN-209ENST00000583043 LIG4P49917 911 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 ARID5BQ14865 1188 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 NAB2Q15742 525 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 NFIL3Q16649 462 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 HYIQ5T013 277 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 CIAPIN1Q6FI81 312 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 TNFRSF25Q93038 417 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 KIFC2Q96AC6 838 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 SCLT1Q96NL6 688 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 OSBPL9Q96SU4 736 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 ABCB6Q9NP58 842 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 TRAF3IP3Q9Y228 551 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 A0A1W2PRG0 241 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 MED7O43513 233 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 TNNC2P02585 160 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 QARSP47897 775 aaKnown RBP6.34□□□□□ -1.39
RTTN-209ENST00000583043 C6orf118Q5T5N4 469 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 APOBEC3FQ8IUX4 373 aaKnown RBP6.34□□□□□ -1.39
RTTN-209ENST00000583043 STAG2Q8N3U4 1231 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 TACO1Q9BSH4 297 aaKnown RBP6.34□□□□□ -1.39
RTTN-209ENST00000583043 ZNF341Q9BYN7 854 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 IQCGQ9H095 443 aaKnown RBP6.34□□□□□ -1.39
RTTN-209ENST00000583043 KCNQ5Q9NR82 932 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 BCCIPQ9P287 314 aaKnown RBP eCLIP6.34□□□□□ -1.39
RTTN-209ENST00000583043 RNF40O75150 1001 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 TMEM253P0C7T8 217 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 ATF7P17544 494 aaPredicted RBP6.34□□□□□ -1.39
RTTN-209ENST00000583043 TNFRSF8P28908 595 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 CIITAP33076 1130 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 GKAP1Q5VSY0 366 aaPredicted RBP6.34□□□□□ -1.39
RTTN-209ENST00000583043 TRAPPC11Q7Z392 1133 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 TTC13Q8NBP0 860 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 RAB20Q9NX57 234 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 HOXC10Q9NYD6 342 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 USP27XA6NNY8 438 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 XPOTO43592 962 aaKnown RBP6.34□□□□□ -1.39
RTTN-209ENST00000583043 CHMP2AO43633 222 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 STK10O94804 968 aaKnown RBP6.34□□□□□ -1.39
RTTN-209ENST00000583043 MMP10P09238 476 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 MSL1Q68DK7 614 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 GSTA5Q7RTV2 222 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 TRIM42Q8IWZ5 723 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 CCDC105Q8IYK2 499 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 GIMAP7Q8NHV1 300 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 CNKSR2Q8WXI2 1034 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 SLC7A3Q8WY07 619 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 C2orf40Q9H1Z8 148 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 BHMT2Q9H2M3 363 aa6.34□□□□□ -1.39
RTTN-209ENST00000583043 SUCLA2Q9P2R7 463 aaPredicted RBP6.34□□□□□ -1.39
RTTN-209ENST00000583043 MYO1FO00160 1098 aa6.34□□□□□ -1.4
RTTN-209ENST00000583043 RGS16O15492 202 aaPredicted RBP6.34□□□□□ -1.4
RTTN-209ENST00000583043 GAS2O43903 313 aaKnown RBP6.34□□□□□ -1.4
RTTN-209ENST00000583043 SOX5P35711 763 aa6.34□□□□□ -1.4
RTTN-209ENST00000583043 SCNN1DP51172 638 aa6.34□□□□□ -1.4
RTTN-209ENST00000583043 GPC5P78333 572 aa6.34□□□□□ -1.4
RTTN-209ENST00000583043 FYB2Q5VWT5 728 aa6.34□□□□□ -1.4
RTTN-209ENST00000583043 RAD9BQ6WBX8 426 aa6.34□□□□□ -1.4
RTTN-209ENST00000583043 ARHGAP24Q8N264 748 aa6.34□□□□□ -1.4
RTTN-209ENST00000583043 NSUN6Q8TEA1 469 aaKnown RBP6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms