RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	SFXN1	Q9H9B4	322 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	MKNK2	Q9HBH9	465 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	FBXO40	Q9UH90	709 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	PPP1R9A	Q9ULJ8	1098 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	RIPK3	Q9Y572	518 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	PCDHB12	Q9Y5F1	795 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	ZMYM6	O95789	1325 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	IL16	Q14005	1332 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	MYH8	P13535	1937 aa		6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	RBAK-RBAKDN	I3L0D1	243 aa		6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	NKRF	O15226	690 aa	Known RBP eCLIP	6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	CLASP2	O75122	1294 aa	Known RBP	6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	EIF2S3	P41091	472 aa	Known RBP	6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	SEMA3B	Q13214	749 aa		6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	ABCB5	Q2M3G0	1257 aa		6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	SLC44A4	Q53GD3	710 aa		6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	LMBR1L	Q6UX01	489 aa		6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	SERINC5	Q86VE9	423 aa		6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	FBXO16	Q8IX29	292 aa	Predicted RBP	6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	C12orf76	Q8N812	135 aa	Predicted RBP	6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	MRPS27	Q92552	414 aa	Known RBP	6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	EHD4	Q9H223	541 aa		6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	MYH16	Q9H6N6	1097 aa		6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	DENND2A	Q9ULE3	1009 aa		6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	MRPS17	Q9Y2R5	130 aa	Known RBP	6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	FLT1	P17948	1338 aa		6.13	□□□□□ -1.43
MSI2-216	ENST00000582772	CCDC163	A0A0D9SF12	145 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	BHMG1	C9JSJ3	638 aa	Predicted RBP	6.12	□□□□□ -1.43
MSI2-216	ENST00000582772		E9PAM4	449 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	PAPLN	O95428	1278 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	NEFM	P07197	916 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	CXCL12	P48061	93 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	ALDH7A1	P49419	539 aa	Known RBP	6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	PFKP	Q01813	784 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	CNTN2	Q02246	1040 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	PDE4B	Q07343	736 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	ZNF746	Q6NUN9	644 aa	Predicted RBP	6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	CYP26C1	Q6V0L0	522 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	KIAA1211	Q6ZU35	1233 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	ATG9A	Q7Z3C6	839 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	TEX11	Q8IYF3	940 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	ANKRD35	Q8N283	1001 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	MRPL43	Q8N983	215 aa	Known RBP	6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	CHST13	Q8NET6	341 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	OR6J1	Q8NGC5	347 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	GAB3	Q8WWW8	586 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	STAM	Q92783	540 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	NRCAM	Q92823	1304 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	KAT2B	Q92831	832 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	CFAP53	Q96M91	514 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	PI4K2A	Q9BTU6	479 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	REPIN1	Q9BWE0	567 aa	Known RBP	6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	OSBPL7	Q9BZF2	842 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	ENTPD7	Q9NQZ7	604 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	CHMP3	Q9Y3E7	222 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	APC	P25054	2843 aa		6.12	□□□□□ -1.43
MSI2-216	ENST00000582772	CABIN1	Q9Y6J0	2220 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	LOC102724159	A0A0B4J2E5	919 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	C2orf71	A6NGG8	1288 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772		E9PSI1	815 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	B4GALT3	O60512	393 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	PPFIA3	O75145	1194 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	HLA-DOA	P06340	250 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	GPC5	P78333	572 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	SATB1	Q01826	763 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	MECOM	Q03112	1051 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	CYP4F3	Q08477	520 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	CAMK2B	Q13554	666 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	PWP2	Q15269	919 aa	Known RBP	6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	DUSP27	Q5VZP5	1158 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	TMC5	Q6UXY8	1006 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	ZNF852	Q6ZMS4	543 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	KBTBD6	Q86V97	674 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	ZC3H18	Q86VM9	953 aa	Known RBP	6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	CMAS	Q8NFW8	434 aa	Predicted RBP	6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	FEZF2	Q8TBJ5	459 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	TTC9	Q92623	222 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	WDR11	Q9BZH6	1224 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	VCPKMT	Q9H867	229 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	WDR6	Q9NNW5	1121 aa	Known RBP	6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	FBXO28	Q9NVF7	368 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	TMEM260	Q9NX78	707 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	HDAC6	Q9UBN7	1215 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	PLEKHB1	Q9UF11	243 aa	Predicted RBP	6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	SEPT3	Q9UH03	358 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	DDX41	Q9UJV9	622 aa	Known RBP	6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	NUMBL	Q9Y6R0	609 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	JMJD1C	Q15652	2540 aa		6.11	□□□□□ -1.43
MSI2-216	ENST00000582772	GOLGA4	Q13439	2230 aa	Known RBP	6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	MED13	Q9UHV7	2174 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	CLUH	O75153	1309 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	BCLAF3	A2AJT9	711 aa	Known RBP	6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	HAS3	O00219	553 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	ENPP3	O14638	875 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	CAVIN2	O95810	425 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	LAMP2	P13473	410 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	HOXB4	P17483	251 aa	Predicted RBP	6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	CD72	P21854	359 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	HOXC8	P31273	242 aa		6.1	□□□□□ -1.43
MSI2-216	ENST00000582772	ADRA1B	P35368	520 aa		6.1	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms