RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 TACC3Q9Y6A5 838 aa11.09□□□□□ -0.63
TRAPPC8-211ENST00000582539 MAGEA1P43355 309 aa11.09□□□□□ -0.63
TRAPPC8-211ENST00000582539 KLHL30Q0D2K2 578 aa11.09□□□□□ -0.63
TRAPPC8-211ENST00000582539 FNBP1Q96RU3 617 aa11.09□□□□□ -0.63
TRAPPC8-211ENST00000582539 SAMSN1Q9NSI8 373 aaKnown RBP11.09□□□□□ -0.63
TRAPPC8-211ENST00000582539 ABHD10Q9NUJ1 306 aa11.09□□□□□ -0.63
TRAPPC8-211ENST00000582539 VAV2P52735 878 aa11.09□□□□□ -0.63
TRAPPC8-211ENST00000582539 CACNB3P54284 484 aa11.09□□□□□ -0.63
TRAPPC8-211ENST00000582539 TTI2Q6NXR4 508 aa11.09□□□□□ -0.63
TRAPPC8-211ENST00000582539 SPIRE2Q8WWL2 714 aa11.09□□□□□ -0.63
TRAPPC8-211ENST00000582539 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRAPPC8-211ENST00000582539 RASAL2Q9UJF2 1139 aa11.09□□□□□ -0.63
TRAPPC8-211ENST00000582539 SLC45A1Q9Y2W3 748 aa11.09□□□□□ -0.63
TRAPPC8-211ENST00000582539 NKRFO15226 690 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 MATR3P43243 847 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 MFAP3P55082 362 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 TNFAIP2Q03169 654 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 TBX2Q13207 712 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 PPIL2Q13356 520 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 SH3D19Q5HYK7 790 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 SNRNP48Q6IEG0 339 aaKnown RBP11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 HACE1Q8IYU2 909 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 RABGGTAQ92696 567 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 ZHX2Q9Y6X8 837 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 ANKRD62A6NC57 917 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 ZC3H11AO75152 810 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 CAPN15O75808 1086 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 SPP2Q13103 211 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 IRF5Q13568 498 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 RASGRP2Q7LDG7 609 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 C12orf56Q8IXR9 622 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 TRMT1Q9NXH9 659 aaKnown RBP11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 ZNF215Q9UL58 517 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 CETPP11597 493 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 LIN9Q5TKA1 542 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 PADI6Q6TGC4 694 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 LSM14BQ9BX40 385 aaKnown RBP11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 MOV10L1Q9BXT6 1211 aaKnown RBP11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 ST6GALNAC4Q9H4F1 302 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 HYOU1Q9Y4L1 999 aa11.08□□□□□ -0.64
TRAPPC8-211ENST00000582539 TESPA1A2RU30 521 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 FAM205CA6NFA0 338 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 MYMKA6NI61 221 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 MSH4O15457 936 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 NR3C1P04150 777 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 PLS3P13797 630 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 CCZ1BP86790 482 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 CCZ1P86791 482 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 ZYXQ15942 572 aaKnown RBP11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 TBC1D10BQ4KMP7 808 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 AMIGO3Q86WK7 504 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 SLC9A9Q8IVB4 645 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 PLIN2Q99541 437 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 FAM124BQ9H5Z6 455 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 CDC23Q9UJX2 597 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 UBIAD1Q9Y5Z9 338 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 POTEMA6NI47 508 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 YDJCA8MPS7 323 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 XPOTO43592 962 aaKnown RBP11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 TNFAIP3P21580 790 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 RBL2Q08999 1139 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 ARMCX5Q6P1M9 558 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 TRIM72Q6ZMU5 477 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 GADL1Q6ZQY3 521 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 SPICE1Q8N0Z3 855 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 C2orf69Q8N8R5 385 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 DNAJC7Q99615 494 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 IFIH1Q9BYX4 1025 aaKnown RBP11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 BHMT2Q9H2M3 363 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 ANKRD31Q8N7Z5 1873 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 NDUFA10O95299 355 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 CYP11B2P19099 503 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 MYL7Q01449 175 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 CTNNBL1Q8WYA6 563 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 TMEM39BQ9GZU3 492 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 MLXIPQ9HAP2 919 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 RNF181Q9P0P0 153 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 SLC9A2Q9UBY0 812 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 FOCADQ5VW36 1801 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 LTBP1Q14766 1721 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 CASP14P31944 242 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 GLE1Q53GS7 698 aaKnown RBP11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 ZNF569Q5MCW4 686 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 HOOK3Q86VS8 718 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 XXYLT1Q8NBI6 393 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 ZNF507Q8TCN5 953 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 SLC10A4Q96EP9 437 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 LXNQ9BS40 222 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 ARFGAP3Q9NP61 516 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 KMT5AQ9NQR1 393 aa11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRAPPC8-211ENST00000582539 MEIS2O14770 477 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 MAGEB2O15479 319 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 CHMP2AO43633 222 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 POLGP54098 1239 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 ANGEL2Q5VTE6 544 aaKnown RBP11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 SYT10Q6XYQ8 523 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 GDAQ9Y2T3 454 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 JRKLQ9Y4A0 524 aa11.06□□□□□ -0.64
TRAPPC8-211ENST00000582539 POTEB3A0JP26 581 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms