RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 COL1A2P08123 1366 aa25.38■■□□□ 1.65
CASC3-207ENST00000581849 SMIM35A0A1B0GVV1 85 aa25.37■■□□□ 1.65
CASC3-207ENST00000581849 CPLX2Q6PUV4 134 aaKnown RBP25.37■■□□□ 1.65
CASC3-207ENST00000581849 SPRED2Q7Z698 418 aa25.37■■□□□ 1.65
CASC3-207ENST00000581849 NME8Q8N427 588 aa25.37■■□□□ 1.65
CASC3-207ENST00000581849 ATP8B4Q8TF62 1192 aa25.37■■□□□ 1.65
CASC3-207ENST00000581849 SUGCTQ9HAC7 445 aa25.37■■□□□ 1.65
CASC3-207ENST00000581849 VPS54Q9P1Q0 977 aa25.37■■□□□ 1.65
CASC3-207ENST00000581849 KDM3AQ9Y4C1 1321 aa25.37■■□□□ 1.65
CASC3-207ENST00000581849 M0QZ92 97 aa25.36■■□□□ 1.65
CASC3-207ENST00000581849 CPLX1O14810 134 aa25.36■■□□□ 1.65
CASC3-207ENST00000581849 BACH1O14867 736 aa25.36■■□□□ 1.65
CASC3-207ENST00000581849 ADAMTS3O15072 1205 aa25.36■■□□□ 1.65
CASC3-207ENST00000581849 DEXIO95424 95 aa25.36■■□□□ 1.65
CASC3-207ENST00000581849 USP11P51784 963 aa25.36■■□□□ 1.65
CASC3-207ENST00000581849 KRT76Q01546 638 aa25.36■■□□□ 1.65
CASC3-207ENST00000581849 SSRP1Q08945 709 aaKnown RBP25.36■■□□□ 1.65
CASC3-207ENST00000581849 AAK1Q2M2I8 961 aa25.36■■□□□ 1.65
CASC3-207ENST00000581849 YME1L1Q96TA2 773 aa25.36■■□□□ 1.65
CASC3-207ENST00000581849 ZNF302Q9NR11 478 aa25.36■■□□□ 1.65
CASC3-207ENST00000581849 TCEAL9Q9UHQ7 104 aa25.36■■□□□ 1.65
CASC3-207ENST00000581849 COG5Q9UP83 839 aa25.36■■□□□ 1.65
CASC3-207ENST00000581849 DDX39AO00148 427 aaKnown RBP25.35■■□□□ 1.65
CASC3-207ENST00000581849 CCDC60Q8IWA6 550 aaPredicted RBP25.35■■□□□ 1.65
CASC3-207ENST00000581849 UPF3BQ9BZI7 483 aaKnown RBP25.35■■□□□ 1.65
CASC3-207ENST00000581849 FAM49AQ9H0Q0 323 aaPredicted RBP25.35■■□□□ 1.65
CASC3-207ENST00000581849 TRPV2Q9Y5S1 764 aa25.35■■□□□ 1.65
CASC3-207ENST00000581849 NLRP5P59047 1200 aa25.34■■□□□ 1.65
CASC3-207ENST00000581849 PRR16Q569H4 304 aa25.34■■□□□ 1.65
CASC3-207ENST00000581849 ZNF484Q5JVG2 852 aa25.34■■□□□ 1.65
CASC3-207ENST00000581849 GALNT17Q6IS24 598 aa25.34■■□□□ 1.65
CASC3-207ENST00000581849 PDXDC2PQ6P474 469 aa25.34■■□□□ 1.65
CASC3-207ENST00000581849 MTHFD1LQ6UB35 978 aa25.34■■□□□ 1.65
CASC3-207ENST00000581849 RASGRP4Q8TDF6 673 aa25.34■■□□□ 1.65
CASC3-207ENST00000581849 GDPD5Q8WTR4 605 aa25.34■■□□□ 1.65
CASC3-207ENST00000581849 LENG9Q96B70 501 aa25.34■■□□□ 1.65
CASC3-207ENST00000581849 FTHL17Q9BXU8 183 aa25.34■■□□□ 1.65
CASC3-207ENST00000581849 PDRG1Q9NUG6 133 aa25.34■■□□□ 1.65
CASC3-207ENST00000581849 PCDHA4Q9UN74 947 aa25.34■■□□□ 1.65
CASC3-207ENST00000581849 MAFBQ9Y5Q3 323 aaPredicted RBP25.34■■□□□ 1.65
CASC3-207ENST00000581849 MYH9P35579 1960 aaKnown RBP25.34■■□□□ 1.65
CASC3-207ENST00000581849 TTC3P53804 2025 aa25.33■■□□□ 1.65
CASC3-207ENST00000581849 ANAPC15P60006 121 aa25.33■■□□□ 1.65
CASC3-207ENST00000581849 DAGLBQ8NCG7 672 aa25.33■■□□□ 1.65
CASC3-207ENST00000581849 FBXO22Q8NEZ5 403 aa25.33■■□□□ 1.65
CASC3-207ENST00000581849 TRAPPC12Q8WVT3 735 aa25.33■■□□□ 1.65
CASC3-207ENST00000581849 BBXQ8WY36 941 aaPredicted RBP25.33■■□□□ 1.65
CASC3-207ENST00000581849 MTUS1Q9ULD2 1270 aa25.33■■□□□ 1.65
CASC3-207ENST00000581849 PCDHA10Q9Y5I2 948 aa25.33■■□□□ 1.65
CASC3-207ENST00000581849 IGSF9BQ9UPX0 1349 aa25.33■■□□□ 1.64
CASC3-207ENST00000581849 RALGAPA2Q2PPJ7 1873 aa25.32■■□□□ 1.64
CASC3-207ENST00000581849 UPP2O95045 317 aa25.32■■□□□ 1.64
CASC3-207ENST00000581849 PSAPP07602 524 aa25.32■■□□□ 1.64
CASC3-207ENST00000581849 SKIV2LQ15477 1246 aaKnown RBP25.32■■□□□ 1.64
CASC3-207ENST00000581849 KRT40Q6A162 431 aa25.32■■□□□ 1.64
CASC3-207ENST00000581849 SWSAP1Q6NVH7 229 aa25.32■■□□□ 1.64
CASC3-207ENST00000581849 RIT2Q99578 217 aa25.32■■□□□ 1.64
CASC3-207ENST00000581849 C17orf80Q9BSJ5 609 aa25.32■■□□□ 1.64
CASC3-207ENST00000581849 CELF4Q9BZC1 486 aaKnown RBP25.32■■□□□ 1.64
CASC3-207ENST00000581849 SPTBN5Q9NRC6 3674 aaKnown RBP25.32■■□□□ 1.64
CASC3-207ENST00000581849 REV3LO60673 3130 aa25.32■■□□□ 1.64
CASC3-207ENST00000581849 ENPP3O14638 875 aa25.31■■□□□ 1.64
CASC3-207ENST00000581849 EIF5BO60841 1220 aaKnown RBP25.31■■□□□ 1.64
CASC3-207ENST00000581849 PPFIA3O75145 1194 aa25.31■■□□□ 1.64
CASC3-207ENST00000581849 KLRC1P26715 233 aa25.31■■□□□ 1.64
CASC3-207ENST00000581849 IL27Q8NEV9 243 aa25.31■■□□□ 1.64
CASC3-207ENST00000581849 ZBTB10Q96DT7 871 aa25.31■■□□□ 1.64
CASC3-207ENST00000581849 IL17RAQ96F46 866 aa25.31■■□□□ 1.64
CASC3-207ENST00000581849 AGO3Q9H9G7 860 aaKnown RBP25.31■■□□□ 1.64
CASC3-207ENST00000581849 CEP131Q9UPN4 1083 aa25.31■■□□□ 1.64
CASC3-207ENST00000581849 WDR64B1ANS9 1081 aa25.3■■□□□ 1.64
CASC3-207ENST00000581849 EDIL3O43854 480 aa25.3■■□□□ 1.64
CASC3-207ENST00000581849 CDKL5O76039 1030 aa25.3■■□□□ 1.64
CASC3-207ENST00000581849 EPC2Q52LR7 807 aa25.3■■□□□ 1.64
CASC3-207ENST00000581849 FAM167AQ96KS9 214 aa25.3■■□□□ 1.64
CASC3-207ENST00000581849 RC3H2Q9HBD1 1191 aaKnown RBP25.3■■□□□ 1.64
CASC3-207ENST00000581849 RWDD3Q9Y3V2 267 aa25.3■■□□□ 1.64
CASC3-207ENST00000581849 NLRC5Q86WI3 1866 aa25.3■■□□□ 1.64
CASC3-207ENST00000581849 ZBTB42B2RXF5 422 aa25.29■■□□□ 1.64
CASC3-207ENST00000581849 M0R2N6 131 aa25.29■■□□□ 1.64
CASC3-207ENST00000581849 ATP4AP20648 1035 aa25.29■■□□□ 1.64
CASC3-207ENST00000581849 CD52P31358 61 aa25.29■■□□□ 1.64
CASC3-207ENST00000581849 MOXD1Q6UVY6 613 aa25.29■■□□□ 1.64
CASC3-207ENST00000581849 BLIDQ8IZY5 108 aa25.29■■□□□ 1.64
CASC3-207ENST00000581849 NCOR1O75376 2440 aa25.29■■□□□ 1.64
CASC3-207ENST00000581849 WDR81Q562E7 1941 aa25.29■■□□□ 1.64
CASC3-207ENST00000581849 LOXHD1Q8IVV2 1947 aa25.29■■□□□ 1.64
CASC3-207ENST00000581849 CYP3A7-CYP3A51PA0A087WV96 503 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 H3BNC9 293 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 RBAK-RBAKDNI3L0D1 243 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 MSH4O15457 936 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 CYP3A7P24462 503 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 SFNP31947 248 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 PAK2Q13177 524 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 PTPROQ16827 1216 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 Q4G0T1 1027 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 ODR4Q5SWX8 454 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 TMEM192Q8IY95 271 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 CKAP2LQ8IYA6 745 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 KIAA0319LQ8IZA0 1049 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms