RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 CD244Q9BZW8 370 aa7.05□□□□□ -1.28
SMCHD1-207ENST00000581711 ZDHHC5Q9C0B5 715 aa7.05□□□□□ -1.28
SMCHD1-207ENST00000581711 EPN3Q9H201 632 aa7.05□□□□□ -1.28
SMCHD1-207ENST00000581711 A0A1W2PQU0 124 aa7.04□□□□□ -1.28
SMCHD1-207ENST00000581711 HMGCRP04035 888 aa7.04□□□□□ -1.28
SMCHD1-207ENST00000581711 FGRP09769 529 aa7.04□□□□□ -1.28
SMCHD1-207ENST00000581711 ZC3H6P61129 1189 aaKnown RBP7.04□□□□□ -1.28
SMCHD1-207ENST00000581711 ARID5AQ03989 594 aa7.04□□□□□ -1.28
SMCHD1-207ENST00000581711 FXNQ16595 210 aa7.04□□□□□ -1.28
SMCHD1-207ENST00000581711 DPY19L2P1Q6NXN4 242 aa7.04□□□□□ -1.28
SMCHD1-207ENST00000581711 KCNT2Q6UVM3 1135 aa7.04□□□□□ -1.28
SMCHD1-207ENST00000581711 LARP4Q71RC2 724 aaKnown RBP eCLIP7.04□□□□□ -1.28
SMCHD1-207ENST00000581711 VPS37DQ86XT2 251 aa7.04□□□□□ -1.28
SMCHD1-207ENST00000581711 MCF2L2Q86YR7 1114 aa7.04□□□□□ -1.28
SMCHD1-207ENST00000581711 WDR26Q9H7D7 661 aa7.04□□□□□ -1.28
SMCHD1-207ENST00000581711 REXO2Q9Y3B8 237 aaKnown RBP7.04□□□□□ -1.28
SMCHD1-207ENST00000581711 RAMP2O60895 175 aa7.03□□□□□ -1.28
SMCHD1-207ENST00000581711 SSBP05455 408 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMCHD1-207ENST00000581711 ETFBP38117 255 aa7.03□□□□□ -1.28
SMCHD1-207ENST00000581711 KCNQ1P51787 676 aa7.03□□□□□ -1.28
SMCHD1-207ENST00000581711 DCAF4Q8WV16 495 aa7.03□□□□□ -1.28
SMCHD1-207ENST00000581711 PRRX2Q99811 253 aa7.03□□□□□ -1.28
SMCHD1-207ENST00000581711 GIT1Q9Y2X7 761 aa7.03□□□□□ -1.28
SMCHD1-207ENST00000581711 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.02□□□□□ -1.29
SMCHD1-207ENST00000581711 SOD2P04179 222 aa7.02□□□□□ -1.29
SMCHD1-207ENST00000581711 PDE6AP16499 860 aa7.02□□□□□ -1.29
SMCHD1-207ENST00000581711 KRT4P19013 534 aa7.02□□□□□ -1.29
SMCHD1-207ENST00000581711 HHEXQ03014 270 aa7.02□□□□□ -1.29
SMCHD1-207ENST00000581711 USP30Q70CQ3 517 aa7.02□□□□□ -1.29
SMCHD1-207ENST00000581711 SGMS1Q86VZ5 419 aa7.02□□□□□ -1.29
SMCHD1-207ENST00000581711 GPR135Q8IZ08 494 aa7.02□□□□□ -1.29
SMCHD1-207ENST00000581711 SH3RF2Q8TEC5 729 aa7.02□□□□□ -1.29
SMCHD1-207ENST00000581711 VOPP1Q96AW1 172 aa7.02□□□□□ -1.29
SMCHD1-207ENST00000581711 ZFYVE21Q9BQ24 234 aa7.02□□□□□ -1.29
SMCHD1-207ENST00000581711 ARHGAP28Q9P2N2 729 aa7.02□□□□□ -1.29
SMCHD1-207ENST00000581711 GJB6O95452 261 aa7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 ADCY8P40145 1251 aa7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 GPR85P60893 370 aa7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 IL13RA1P78552 427 aa7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 GRM7Q14831 915 aa7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 Q6ZPA2 131 aa7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 TMPRSS6Q8IU80 811 aa7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 ULK2Q8IYT8 1036 aa7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 SLC43A3Q8NBI5 491 aa7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 NELFAQ9H3P2 528 aa7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 ZNF408Q9H9D4 720 aa7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 SLC2A4RGQ9NR83 387 aa7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 PARPBPQ9NWS1 579 aa7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 HECAQ9UBI9 543 aaPredicted RBP7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 PRKAG3Q9UGI9 489 aa7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 FBXO10Q9UK96 956 aa7.01□□□□□ -1.29
SMCHD1-207ENST00000581711 TCRBV5S4A2TA0A5A2 114 aa7□□□□□ -1.29
SMCHD1-207ENST00000581711 FAM47E-STBD1D6RA91 191 aa7□□□□□ -1.29
SMCHD1-207ENST00000581711 COL10A1Q03692 680 aa7□□□□□ -1.29
SMCHD1-207ENST00000581711 NTRK3Q16288 839 aa7□□□□□ -1.29
SMCHD1-207ENST00000581711 BTBD8Q5XKL5 378 aa7□□□□□ -1.29
SMCHD1-207ENST00000581711 ADGRE4PQ86SQ3 457 aa7□□□□□ -1.29
SMCHD1-207ENST00000581711 GMLQ99445 158 aa7□□□□□ -1.29
SMCHD1-207ENST00000581711 TTPALQ9BTX7 342 aa7□□□□□ -1.29
SMCHD1-207ENST00000581711 IPPKQ9H8X2 491 aa7□□□□□ -1.29
SMCHD1-207ENST00000581711 KRTAP23-1A1A580 65 aa6.99□□□□□ -1.29
SMCHD1-207ENST00000581711 CAPN14A8MX76 684 aa6.99□□□□□ -1.29
SMCHD1-207ENST00000581711 PTPN1P18031 435 aaKnown RBP6.99□□□□□ -1.29
SMCHD1-207ENST00000581711 EIF4HQ15056 248 aaKnown RBP6.99□□□□□ -1.29
SMCHD1-207ENST00000581711 CXXC5Q7LFL8 322 aaKnown RBP6.99□□□□□ -1.29
SMCHD1-207ENST00000581711 IFNL3Q8IZI9 196 aa6.99□□□□□ -1.29
SMCHD1-207ENST00000581711 D2HGDHQ8N465 521 aa6.99□□□□□ -1.29
SMCHD1-207ENST00000581711 INCENPQ9NQS7 918 aa6.99□□□□□ -1.29
SMCHD1-207ENST00000581711 RIC8BQ9NVN3 520 aa6.99□□□□□ -1.29
SMCHD1-207ENST00000581711 FAM90A27PA6NNH2 459 aa6.98□□□□□ -1.29
SMCHD1-207ENST00000581711 PCOLCEQ15113 449 aa6.98□□□□□ -1.29
SMCHD1-207ENST00000581711 SPTY2D1Q68D10 685 aaPredicted RBP6.98□□□□□ -1.29
SMCHD1-207ENST00000581711 STYK1Q6J9G0 422 aa6.98□□□□□ -1.29
SMCHD1-207ENST00000581711 SCUBE1Q8IWY4 988 aa6.98□□□□□ -1.29
SMCHD1-207ENST00000581711 THEMISQ8N1K5 641 aaPredicted RBP6.98□□□□□ -1.29
SMCHD1-207ENST00000581711 OR10A2Q9H208 303 aa6.98□□□□□ -1.29
SMCHD1-207ENST00000581711 CDC42EP3Q9UKI2 254 aa6.98□□□□□ -1.29
SMCHD1-207ENST00000581711 FOXN1O15353 648 aa6.97□□□□□ -1.29
SMCHD1-207ENST00000581711 CYP27B1O15528 508 aa6.97□□□□□ -1.29
SMCHD1-207ENST00000581711 PEX11BO96011 259 aa6.97□□□□□ -1.29
SMCHD1-207ENST00000581711 PTGS1P23219 599 aa6.97□□□□□ -1.29
SMCHD1-207ENST00000581711 MRE11P49959 708 aa6.97□□□□□ -1.29
SMCHD1-207ENST00000581711 HSP90AA2PQ14568 343 aaPredicted RBP6.97□□□□□ -1.29
SMCHD1-207ENST00000581711 RRP1BQ14684 758 aaKnown RBP6.97□□□□□ -1.29
SMCHD1-207ENST00000581711 STILQ15468 1287 aa6.97□□□□□ -1.29
SMCHD1-207ENST00000581711 TRIM68Q6AZZ1 485 aa6.97□□□□□ -1.29
SMCHD1-207ENST00000581711 OTOP2Q7RTS6 562 aa6.97□□□□□ -1.29
SMCHD1-207ENST00000581711 FILIP1Q7Z7B0 1213 aa6.97□□□□□ -1.29
SMCHD1-207ENST00000581711 OR14K1Q8NGZ2 314 aa6.97□□□□□ -1.29
SMCHD1-207ENST00000581711 TMEM176AQ96HP8 235 aa6.97□□□□□ -1.29
SMCHD1-207ENST00000581711 C8orf37Q96NL8 207 aa6.97□□□□□ -1.29
SMCHD1-207ENST00000581711 SRPK3Q9UPE1 567 aa6.97□□□□□ -1.29
SMCHD1-207ENST00000581711 PRODHO43272 600 aa6.96□□□□□ -1.3
SMCHD1-207ENST00000581711 LMO1P25800 156 aa6.96□□□□□ -1.3
SMCHD1-207ENST00000581711 HGFACQ04756 655 aa6.96□□□□□ -1.3
SMCHD1-207ENST00000581711 CRHR2Q13324 411 aa6.96□□□□□ -1.3
SMCHD1-207ENST00000581711 NLGN4XQ8N0W4 816 aa6.96□□□□□ -1.3
SMCHD1-207ENST00000581711 HNRNPLLQ8WVV9 542 aaKnown RBP6.96□□□□□ -1.3
SMCHD1-207ENST00000581711 ALG1Q9BT22 464 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms