RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 NOSTRINQ8IVI9 506 aa14.25□□□□□ -0.13
SNORD55-201ENST00000581525 SLFN12Q8IYM2 578 aa14.25□□□□□ -0.13
SNORD55-201ENST00000581525 GJA10Q969M2 543 aa14.25□□□□□ -0.13
SNORD55-201ENST00000581525 INTS4Q96HW7 963 aaKnown RBP14.25□□□□□ -0.13
SNORD55-201ENST00000581525 UIMC1Q96RL1 719 aa14.25□□□□□ -0.13
SNORD55-201ENST00000581525 CEP89Q96ST8 783 aa14.25□□□□□ -0.13
SNORD55-201ENST00000581525 TUBE1Q9UJT0 475 aa14.25□□□□□ -0.13
SNORD55-201ENST00000581525 SQORQ9Y6N5 450 aa14.25□□□□□ -0.13
SNORD55-201ENST00000581525 TRIP12Q14669 1992 aaPredicted RBP14.25□□□□□ -0.13
SNORD55-201ENST00000581525 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.24□□□□□ -0.13
SNORD55-201ENST00000581525 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.24□□□□□ -0.13
SNORD55-201ENST00000581525 RSPH10B2B2RC85 870 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 KIF28PB7ZC32 967 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 BACH1O14867 736 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 RSPH10BP0C881 870 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 GJB2P29033 226 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 GUCY1B3Q02153 619 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 MGAT3Q09327 533 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 EPHA7Q15375 998 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 TARBP2Q15633 366 aaKnown RBP14.24□□□□□ -0.13
SNORD55-201ENST00000581525 MTHFD1LQ6UB35 978 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 RUFY4Q6ZNE9 571 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 POTEDQ86YR6 584 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 NME8Q8N427 588 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 C4orf32Q8N8J7 132 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 FAM167AQ96KS9 214 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 NIFKQ9BYG3 293 aaKnown RBP14.24□□□□□ -0.13
SNORD55-201ENST00000581525 GABBR1Q9UBS5 961 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 TCEAL9Q9UHQ7 104 aa14.24□□□□□ -0.13
SNORD55-201ENST00000581525 KDM3AQ9Y4C1 1321 aa14.23□□□□□ -0.13
SNORD55-201ENST00000581525 EML1O00423 815 aa14.23□□□□□ -0.13
SNORD55-201ENST00000581525 BAIAP3O94812 1187 aa14.23□□□□□ -0.13
SNORD55-201ENST00000581525 BAG4O95429 457 aaKnown RBP14.23□□□□□ -0.13
SNORD55-201ENST00000581525 TOB1P50616 345 aaPredicted RBP14.23□□□□□ -0.13
SNORD55-201ENST00000581525 PLEKHG4Q58EX7 1191 aa14.23□□□□□ -0.13
SNORD55-201ENST00000581525 MIER3Q7Z3K6 550 aa14.23□□□□□ -0.13
SNORD55-201ENST00000581525 LINC01465Q8N7H1 131 aa14.23□□□□□ -0.13
SNORD55-201ENST00000581525 PHOSPHO2Q8TCD6 241 aa14.23□□□□□ -0.13
SNORD55-201ENST00000581525 RNPC3Q96LT9 517 aaKnown RBP14.23□□□□□ -0.13
SNORD55-201ENST00000581525 NRBP2Q9NSY0 501 aa14.23□□□□□ -0.13
SNORD55-201ENST00000581525 CHRNA1P02708 482 aa14.22□□□□□ -0.13
SNORD55-201ENST00000581525 P4HBP07237 508 aaKnown RBP14.22□□□□□ -0.13
SNORD55-201ENST00000581525 KLRC1P26715 233 aa14.22□□□□□ -0.13
SNORD55-201ENST00000581525 THPOP40225 353 aa14.22□□□□□ -0.13
SNORD55-201ENST00000581525 UGCGQ16739 394 aa14.22□□□□□ -0.13
SNORD55-201ENST00000581525 XKR3Q5GH77 459 aa14.22□□□□□ -0.13
SNORD55-201ENST00000581525 CNKSR3Q6P9H4 555 aa14.22□□□□□ -0.13
SNORD55-201ENST00000581525 KIAA0319LQ8IZA0 1049 aa14.22□□□□□ -0.13
SNORD55-201ENST00000581525 LRCH3Q96II8 777 aa14.22□□□□□ -0.13
SNORD55-201ENST00000581525 HSD17B14Q9BPX1 270 aa14.22□□□□□ -0.13
SNORD55-201ENST00000581525 TMEM60Q9H2L4 133 aa14.22□□□□□ -0.13
SNORD55-201ENST00000581525 CXXC1Q9P0U4 656 aaPredicted RBP14.22□□□□□ -0.13
SNORD55-201ENST00000581525 PCDHA12Q9UN75 941 aa14.22□□□□□ -0.13
SNORD55-201ENST00000581525 CEP131Q9UPN4 1083 aa14.22□□□□□ -0.13
SNORD55-201ENST00000581525 SMC3Q9UQE7 1217 aa14.22□□□□□ -0.13
SNORD55-201ENST00000581525 TRPC6Q9Y210 931 aa14.22□□□□□ -0.13
SNORD55-201ENST00000581525 CHD9Q3L8U1 2897 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 TANC1Q9C0D5 1861 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 IGKV6-21A0A0C4DH24 114 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 ABHD14A-ACY1A0A1B0GW23 586 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 MAGEB2O15479 319 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 NEMFO60524 1076 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 LYPLA2O95372 231 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 C22orf31O95567 290 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 OATP04181 439 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 ACTN1P12814 892 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 QARSP47897 775 aaKnown RBP14.21□□□□□ -0.13
SNORD55-201ENST00000581525 FOSBP53539 338 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 PSMC5P62195 406 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 TCTN1Q2MV58 587 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 DEFB128Q7Z7B8 93 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 RSPH3Q86UC2 560 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 C4orf19Q8IY42 314 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 ZNF710Q8N1W2 664 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 TRAPPC12Q8WVT3 735 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 DNAJB3Q8WWF6 145 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 OSBPL7Q9BZF2 842 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 MTIF3Q9H2K0 278 aaKnown RBP14.21□□□□□ -0.13
SNORD55-201ENST00000581525 SAMM50Q9Y512 469 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 PPME1Q9Y570 386 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 TET1Q8NFU7 2136 aa14.21□□□□□ -0.13
SNORD55-201ENST00000581525 TMEM265A0A087WTH1 108 aa14.2□□□□□ -0.14
SNORD55-201ENST00000581525 K7ELQ4 463 aaPredicted RBP14.2□□□□□ -0.14
SNORD55-201ENST00000581525 CHMP2AO43633 222 aa14.2□□□□□ -0.14
SNORD55-201ENST00000581525 DKC1O60832 514 aaKnown RBP eCLIP14.2□□□□□ -0.14
SNORD55-201ENST00000581525 EFCAB14O75071 495 aa14.2□□□□□ -0.14
SNORD55-201ENST00000581525 SLITRK3O94933 977 aa14.2□□□□□ -0.14
SNORD55-201ENST00000581525 PRKCEQ02156 737 aa14.2□□□□□ -0.14
SNORD55-201ENST00000581525 CALCRLQ16602 461 aa14.2□□□□□ -0.14
SNORD55-201ENST00000581525 LARP1BQ659C4 914 aaKnown RBP14.2□□□□□ -0.14
SNORD55-201ENST00000581525 OTOP2Q7RTS6 562 aa14.2□□□□□ -0.14
SNORD55-201ENST00000581525 DBF4BQ8NFT6 615 aa14.2□□□□□ -0.14
SNORD55-201ENST00000581525 TTC12Q9H892 705 aaPredicted RBP14.2□□□□□ -0.14
SNORD55-201ENST00000581525 KAT6AQ92794 2004 aa14.2□□□□□ -0.14
SNORD55-201ENST00000581525 SCN5AQ14524 2016 aa14.19□□□□□ -0.14
SNORD55-201ENST00000581525 IGBP1P78318 339 aa14.19□□□□□ -0.14
SNORD55-201ENST00000581525 MRPS6P82932 125 aaKnown RBP14.19□□□□□ -0.14
SNORD55-201ENST00000581525 PDIA5Q14554 519 aa14.19□□□□□ -0.14
SNORD55-201ENST00000581525 FBXO47Q5MNV8 452 aa14.19□□□□□ -0.14
SNORD55-201ENST00000581525 TTC38Q5R3I4 469 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms