RNA–Protein interactions for RNA: ENST00000581166.5

SUPT4H1-205, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-205ENST00000581166 CA3P07451 260 aa15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 ATP4AP20648 1035 aa15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 INF2Q27J81 1249 aa15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 LRCH2Q5VUJ6 765 aa15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 MTHFD1LQ6UB35 978 aa15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 TRAPPC12Q8WVT3 735 aa15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 APBB2Q92870 758 aa15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 ZBTB10Q96DT7 871 aa15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 TEKT3Q9BXF9 490 aa15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 OSBPL7Q9BZF2 842 aa15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 CHD7Q9P2D1 2997 aa15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 LIMCH1Q9UPQ0 1083 aa15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 SAMM50Q9Y512 469 aa15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 MYH9P35579 1960 aaKnown RBP15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 COL1A2P08123 1366 aa15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 MICAL3Q7RTP6 2002 aa15.89■□□□□ 0.13
SUPT4H1-205ENST00000581166 EYSQ5T1H1 3165 aa15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 TLL1O43897 1013 aa15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 PSMD10O75832 226 aa15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 SFNP31947 248 aa15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 ZNF484Q5JVG2 852 aa15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 IER5Q5VY09 327 aa15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 CKAP2LQ8IYA6 745 aa15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 MAFAQ8NHW3 353 aaPredicted RBP15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 OXER1Q8TDS5 423 aa15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 BBXQ8WY36 941 aaPredicted RBP15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 GAS2L1Q99501 681 aaPredicted RBP15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 KIF2CQ99661 725 aa15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 ZBED2Q9BTP6 218 aa15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 IFIH1Q9BYX4 1025 aaKnown RBP15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 PRDM12Q9H4Q4 367 aa15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 DISC1Q9NRI5 854 aa15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 GABBR1Q9UBS5 961 aa15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 CDY2AQ9Y6F7 541 aa15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 SIP14410 1827 aa15.88■□□□□ 0.13
SUPT4H1-205ENST00000581166 SMIM35A0A1B0GVV1 85 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 RBAK-RBAKDNI3L0D1 243 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 GJB5O95377 273 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 AMHP03971 560 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 KLRC1P26715 233 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 JAK3P52333 1124 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 MRPS6P82932 125 aaKnown RBP15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 ST3GAL1Q11201 340 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 LETM2Q2VYF4 491 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 PPP4R3AQ6IN85 833 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.87■□□□□ 0.132e-6■□□□□ 8.8
SUPT4H1-205ENST00000581166 PIK3AP1Q6ZUJ8 805 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 TMCO2Q7Z6W1 182 aaPredicted RBP15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 NEK8Q86SG6 692 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 NME8Q8N427 588 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 ETNPPLQ8TBG4 499 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 FAM49AQ9H0Q0 323 aaPredicted RBP15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 UNC45AQ9H3U1 944 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 BRMS1Q9HCU9 246 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 DDX25Q9UHL0 483 aaKnown RBP15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 WDR81Q562E7 1941 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 IGSF9BQ9UPX0 1349 aa15.87■□□□□ 0.13
SUPT4H1-205ENST00000581166 M0QZ92 97 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 JAK2O60674 1132 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 GHRP10912 638 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 GCFC2P16383 781 aaKnown RBP15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 KRT2P35908 639 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 RBM25P49756 843 aaKnown RBP15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 TAP1Q03518 808 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 LPIN1Q14693 890 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 FBXO47Q5MNV8 452 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 MYOCDQ8IZQ8 938 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 SLC17A8Q8NDX2 589 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 RDM1Q8NG50 284 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 GJA10Q969M2 543 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 FAM167AQ96KS9 214 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 RAD9AQ99638 391 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 NAP1L4Q99733 375 aaKnown RBP15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 CEP131Q9UPN4 1083 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 SQORQ9Y6N5 450 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 MYO9BQ13459 2157 aa15.86■□□□□ 0.13
SUPT4H1-205ENST00000581166 ZBTB42B2RXF5 422 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 CHMP2AO43633 222 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 SLC37A4O43826 429 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 B3GNT9Q6UX72 402 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 TSHZ1Q6ZSZ6 1077 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 USP38Q8NB14 1042 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 ZSCAN31Q96LW9 406 aaPredicted RBP15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 TRPV2Q9Y5S1 764 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 KDM3AQ9Y4C1 1321 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 CCNT1O60563 726 aaKnown RBP15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 ARHGEF15O94989 841 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 MMP1P03956 469 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 NR5A1Q13285 461 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 TRIM29Q14134 588 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 EARS2Q5JPH6 523 aaKnown RBP15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 TRMT1LQ7Z2T5 733 aaKnown RBP15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 MIER3Q7Z3K6 550 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 KIAA0319LQ8IZA0 1049 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 TNFRSF25Q93038 417 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 FAM20AQ96MK3 541 aa15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 CELF4Q9BZC1 486 aaKnown RBP15.85■□□□□ 0.13
SUPT4H1-205ENST00000581166 KCNMB3Q9NPA1 279 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms