RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 PPP1R1BQ9UD71 204 aaPredicted RBP5.2□□□□□ -1.58
SMG8-205ENST00000580798 DMRT1Q9Y5R6 373 aa5.2□□□□□ -1.58
SMG8-205ENST00000580798 AGRPO00253 132 aa5.19□□□□□ -1.58
SMG8-205ENST00000580798 ANP32CO43423 234 aa5.19□□□□□ -1.58
SMG8-205ENST00000580798 CALRP27797 417 aaKnown RBP5.19□□□□□ -1.58
SMG8-205ENST00000580798 DUSP8Q13202 625 aa5.19□□□□□ -1.58
SMG8-205ENST00000580798 TRIM48Q8IWZ4 208 aa5.19□□□□□ -1.58
SMG8-205ENST00000580798 ZNF808Q8N4W9 903 aaPredicted RBP5.19□□□□□ -1.58
SMG8-205ENST00000580798 CELF2-AS1Q8N7Q2 184 aa5.19□□□□□ -1.58
SMG8-205ENST00000580798 PIP4K2CQ8TBX8 421 aa5.19□□□□□ -1.58
SMG8-205ENST00000580798 KCTD13Q8WZ19 329 aa5.19□□□□□ -1.58
SMG8-205ENST00000580798 VOPP1Q96AW1 172 aa5.19□□□□□ -1.58
SMG8-205ENST00000580798 FAM89AQ96GI7 184 aa5.19□□□□□ -1.58
SMG8-205ENST00000580798 OR14A2Q96R54 314 aa5.19□□□□□ -1.58
SMG8-205ENST00000580798 IER2Q9BTL4 223 aa5.19□□□□□ -1.58
SMG8-205ENST00000580798 CARD11Q9BXL7 1154 aa5.19□□□□□ -1.58
SMG8-205ENST00000580798 SLC6A20Q9NP91 592 aa5.19□□□□□ -1.58
SMG8-205ENST00000580798 TERF2IPQ9NYB0 399 aa5.19□□□□□ -1.58
SMG8-205ENST00000580798 MAGEC2Q9UBF1 373 aaPredicted RBP5.19□□□□□ -1.58
SMG8-205ENST00000580798 H0Y858 1186 aa5.18□□□□□ -1.58
SMG8-205ENST00000580798 KRIT1O00522 736 aa5.18□□□□□ -1.58
SMG8-205ENST00000580798 DLX3O60479 287 aa5.18□□□□□ -1.58
SMG8-205ENST00000580798 CDC14BO60729 498 aa5.18□□□□□ -1.58
SMG8-205ENST00000580798 IL18BPO95998 194 aa5.18□□□□□ -1.58
SMG8-205ENST00000580798 FAHP16930 419 aa5.18□□□□□ -1.58
SMG8-205ENST00000580798 MAKP20794 623 aa5.18□□□□□ -1.58
SMG8-205ENST00000580798 PFKPQ01813 784 aa5.18□□□□□ -1.58
SMG8-205ENST00000580798 GNL2Q13823 731 aaKnown RBP5.18□□□□□ -1.58
SMG8-205ENST00000580798 NOLC1Q14978 699 aaKnown RBP eCLIP5.18□□□□□ -1.58
SMG8-205ENST00000580798 USP53Q70EK8 1073 aa5.18□□□□□ -1.58
SMG8-205ENST00000580798 RBM12BQ8IXT5 1001 aaKnown RBP5.18□□□□□ -1.58
SMG8-205ENST00000580798 IPO4Q8TEX9 1081 aaKnown RBP5.18□□□□□ -1.58
SMG8-205ENST00000580798 ZNF483Q8TF39 744 aaPredicted RBP5.18□□□□□ -1.58
SMG8-205ENST00000580798 HNRNPLLQ8WVV9 542 aaKnown RBP5.18□□□□□ -1.58
SMG8-205ENST00000580798 TINF2Q9BSI4 451 aa5.18□□□□□ -1.58
SMG8-205ENST00000580798 PHF20Q9BVI0 1012 aa5.18□□□□□ -1.58
SMG8-205ENST00000580798 GPR27Q9NS67 375 aa5.18□□□□□ -1.58
SMG8-205ENST00000580798 PAN2Q504Q3 1202 aaKnown RBP5.17□□□□□ -1.58
SMG8-205ENST00000580798 WDR78Q5VTH9 848 aa5.17□□□□□ -1.58
SMG8-205ENST00000580798 APBB1IPQ7Z5R6 666 aaPredicted RBP5.17□□□□□ -1.58
SMG8-205ENST00000580798 MCF2L2Q86YR7 1114 aa5.17□□□□□ -1.58
SMG8-205ENST00000580798 SCUBE1Q8IWY4 988 aa5.17□□□□□ -1.58
SMG8-205ENST00000580798 PLA2G12BQ9BX93 195 aa5.17□□□□□ -1.58
SMG8-205ENST00000580798 METTL14Q9HCE5 456 aaKnown RBP5.17□□□□□ -1.58
SMG8-205ENST00000580798 ST7Q9NRC1 585 aa5.17□□□□□ -1.58
SMG8-205ENST00000580798 NAP1L2Q9ULW6 460 aaPredicted RBP5.17□□□□□ -1.58
SMG8-205ENST00000580798 MATN2O00339 956 aa5.16□□□□□ -1.58
SMG8-205ENST00000580798 ENO2P09104 434 aaPredicted RBP5.16□□□□□ -1.58
SMG8-205ENST00000580798 LMO1P25800 156 aa5.16□□□□□ -1.58
SMG8-205ENST00000580798 ARID5AQ03989 594 aa5.16□□□□□ -1.58
SMG8-205ENST00000580798 DDR2Q16832 855 aa5.16□□□□□ -1.58
SMG8-205ENST00000580798 LONRF3Q496Y0 759 aa5.16□□□□□ -1.58
SMG8-205ENST00000580798 CD276Q5ZPR3 534 aa5.16□□□□□ -1.58
SMG8-205ENST00000580798 FTSJ3Q8IY81 847 aaKnown RBP5.16□□□□□ -1.58
SMG8-205ENST00000580798 FAM9BQ8IZU0 186 aa5.16□□□□□ -1.58
SMG8-205ENST00000580798 NAF1Q96HR8 494 aaKnown RBP5.16□□□□□ -1.58
SMG8-205ENST00000580798 TACO1Q9BSH4 297 aaKnown RBP5.16□□□□□ -1.58
SMG8-205ENST00000580798 LTFP02788 710 aa5.15□□□□□ -1.59
SMG8-205ENST00000580798 KRT4P19013 534 aa5.15□□□□□ -1.59
SMG8-205ENST00000580798 GRK2P25098 689 aa5.15□□□□□ -1.59
SMG8-205ENST00000580798 POLD1P28340 1107 aa5.15□□□□□ -1.59
SMG8-205ENST00000580798 GRK3P35626 688 aa5.15□□□□□ -1.59
SMG8-205ENST00000580798 IL12RB1P42701 662 aa5.15□□□□□ -1.59
SMG8-205ENST00000580798 RRADP55042 308 aa5.15□□□□□ -1.59
SMG8-205ENST00000580798 ZC3H6P61129 1189 aaKnown RBP5.15□□□□□ -1.59
SMG8-205ENST00000580798 FAM193AP78312 1265 aa5.15□□□□□ -1.59
SMG8-205ENST00000580798 FOXL1Q12952 345 aa5.15□□□□□ -1.59
SMG8-205ENST00000580798 TUSC3Q13454 348 aa5.15□□□□□ -1.59
SMG8-205ENST00000580798 TOP3AQ13472 1001 aaPredicted RBP5.15□□□□□ -1.59
SMG8-205ENST00000580798 NTRK3Q16288 839 aa5.15□□□□□ -1.59
SMG8-205ENST00000580798 Q6ZPA2 131 aa5.15□□□□□ -1.59
SMG8-205ENST00000580798 OTOP3Q7RTS5 596 aa5.15□□□□□ -1.59
SMG8-205ENST00000580798 ZNF703Q9H7S9 590 aaPredicted RBP5.15□□□□□ -1.59
SMG8-205ENST00000580798 TLR9Q9NR96 1032 aa5.15□□□□□ -1.59
SMG8-205ENST00000580798 R3HCC1Q9Y3T6 440 aaKnown RBP5.15□□□□□ -1.59
SMG8-205ENST00000580798 ZNF839A8K0R7 811 aa5.14□□□□□ -1.59
SMG8-205ENST00000580798 CLGNO14967 610 aa5.14□□□□□ -1.59
SMG8-205ENST00000580798 PRODHO43272 600 aa5.14□□□□□ -1.59
SMG8-205ENST00000580798 RAMP2O60895 175 aa5.14□□□□□ -1.59
SMG8-205ENST00000580798 EIF3JO75822 258 aaKnown RBP5.14□□□□□ -1.59
SMG8-205ENST00000580798 COL6A2P12110 1019 aa5.14□□□□□ -1.59
SMG8-205ENST00000580798 HIBADHP31937 336 aaKnown RBP5.14□□□□□ -1.59
SMG8-205ENST00000580798 COL10A1Q03692 680 aa5.14□□□□□ -1.59
SMG8-205ENST00000580798 HSP90AA2PQ14568 343 aaPredicted RBP5.14□□□□□ -1.59
SMG8-205ENST00000580798 ZMAT1Q5H9K5 638 aa5.14□□□□□ -1.59
SMG8-205ENST00000580798 LRCH2Q5VUJ6 765 aa5.14□□□□□ -1.59
SMG8-205ENST00000580798 KCNT2Q6UVM3 1135 aa5.14□□□□□ -1.59
SMG8-205ENST00000580798 RSPO2Q6UXX9 243 aaPredicted RBP5.14□□□□□ -1.59
SMG8-205ENST00000580798 LBX2Q6XYB7 198 aa5.14□□□□□ -1.59
SMG8-205ENST00000580798 FAM43BQ6ZT52 329 aaPredicted RBP5.14□□□□□ -1.59
SMG8-205ENST00000580798 UHMK1Q8TAS1 419 aaKnown RBP5.14□□□□□ -1.59
SMG8-205ENST00000580798 CLIP3Q96DZ5 547 aa5.14□□□□□ -1.59
SMG8-205ENST00000580798 AARSD1Q9BTE6 412 aaKnown RBP5.14□□□□□ -1.59
SMG8-205ENST00000580798 PDGFDQ9GZP0 370 aaPredicted RBP5.14□□□□□ -1.59
SMG8-205ENST00000580798 ARHGEF4Q9NR80 690 aa5.14□□□□□ -1.59
SMG8-205ENST00000580798 CEP72Q9P209 647 aa5.14□□□□□ -1.59
SMG8-205ENST00000580798 NR2E1Q9Y466 385 aa5.14□□□□□ -1.59
SMG8-205ENST00000580798 TELO2Q9Y4R8 837 aa5.14□□□□□ -1.59
SMG8-205ENST00000580798 ESYT3A0FGR9 886 aa5.13□□□□□ -1.59
SMG8-205ENST00000580798 BLACEA4D250 179 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms