RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 CDCA3Q99618 268 aaPredicted RBP12.39□□□□□ -0.43
TOP3A-210ENST00000580713 GPR20Q99678 358 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 MFSD1Q9H3U5 465 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 RNF41Q9H4P4 317 aaPredicted RBP12.39□□□□□ -0.43
TOP3A-210ENST00000580713 HELLSQ9NRZ9 838 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 MAP3K20Q9NYL2 800 aaKnown RBP12.39□□□□□ -0.43
TOP3A-210ENST00000580713 PCDHB12Q9Y5F1 795 aa12.39□□□□□ -0.43
TOP3A-210ENST00000580713 GCOM1H8Y6P7 765 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-210ENST00000580713 POLR2MP0CAP2 368 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 GATMP50440 423 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 PPFIA1Q13136 1202 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 MTMR3Q13615 1198 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 DUSP6Q16828 381 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 C8orf34Q49A92 452 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 MCMDC2Q4G0Z9 681 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 LLGL2Q6P1M3 1020 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 TBC1D10CQ8IV04 446 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 UBALD2Q8IYN6 164 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 VN1R2Q8NFZ6 395 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 ATP8B4Q8TF62 1192 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 LINC01599Q8WXQ3 324 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 RILPL2Q969X0 211 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 SORCS3Q9UPU3 1222 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 NR2E1Q9Y466 385 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 PCDHA1Q9Y5I3 950 aa12.38□□□□□ -0.43
TOP3A-210ENST00000580713 CDC45O75419 566 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 BRD1O95696 1058 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 SCG2P13521 617 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 UBE3AQ05086 875 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 ANKRD54Q6NXT1 300 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 RTN4RL1Q86UN2 441 aaPredicted RBP12.37□□□□□ -0.43
TOP3A-210ENST00000580713 THNSL1Q8IYQ7 743 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 SAMD3Q8N6K7 520 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 KCNG4Q8TDN1 519 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 FAM227BQ96M60 508 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 FTHL17Q9BXU8 183 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 BACH2Q9BYV9 841 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 S1PR5Q9H228 398 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 AGO3Q9H9G7 860 aaKnown RBP12.37□□□□□ -0.43
TOP3A-210ENST00000580713 AAASQ9NRG9 546 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 RTEL1Q9NZ71 1219 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 TUBE1Q9UJT0 475 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 KAT6AQ92794 2004 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 MYH6P13533 1939 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 NEDD4P46934 1319 aa12.37□□□□□ -0.43
TOP3A-210ENST00000580713 GVINP1Q7Z2Y8 2422 aa12.36□□□□□ -0.43
TOP3A-210ENST00000580713 A0A0D9SFI3 127 aa12.36□□□□□ -0.43
TOP3A-210ENST00000580713 M0QZ92 97 aa12.36□□□□□ -0.43
TOP3A-210ENST00000580713 FIBPO43427 364 aa12.36□□□□□ -0.43
TOP3A-210ENST00000580713 MARK3P27448 753 aa12.36□□□□□ -0.43
TOP3A-210ENST00000580713 ERVFC1P60507 584 aa12.36□□□□□ -0.43
TOP3A-210ENST00000580713 IGBP1P78318 339 aa12.36□□□□□ -0.43
TOP3A-210ENST00000580713 MRPS6P82932 125 aaKnown RBP12.36□□□□□ -0.43
TOP3A-210ENST00000580713 GHRHRQ02643 423 aa12.36□□□□□ -0.43
TOP3A-210ENST00000580713 GRIK4Q16099 956 aa12.36□□□□□ -0.43
TOP3A-210ENST00000580713 PLPP4Q5VZY2 271 aa12.36□□□□□ -0.43
TOP3A-210ENST00000580713 PDE12Q6L8Q7 609 aaKnown RBP12.36□□□□□ -0.43
TOP3A-210ENST00000580713 MAMSTRQ6ZN01 415 aa12.36□□□□□ -0.43
TOP3A-210ENST00000580713 FLCNQ8NFG4 579 aa12.36□□□□□ -0.43
TOP3A-210ENST00000580713 EVI5LQ96CN4 794 aa12.36□□□□□ -0.43
TOP3A-210ENST00000580713 FAM49AQ9H0Q0 323 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-210ENST00000580713 TMEM260Q9NX78 707 aa12.36□□□□□ -0.43
TOP3A-210ENST00000580713 TELO2Q9Y4R8 837 aa12.36□□□□□ -0.43
TOP3A-210ENST00000580713 MED19A0JLT2 244 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-210ENST00000580713 SPATA31C2B4DYI2 1134 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 KLRF2D3W0D1 207 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 ZNF213O14771 459 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 ZBTB5O15062 677 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 PPP1R11O60927 126 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-210ENST00000580713 FGF18O76093 207 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 APOBRQ0VD83 1088 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 PAK2Q13177 524 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 SEMA3FQ13275 785 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 IER5Q5VY09 327 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 SYCE2Q6PIF2 218 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 CASC1Q6TDU7 716 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 DGLUCYQ7Z3D6 616 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 HOMER1Q86YM7 354 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 STAG2Q8N3U4 1231 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 ZSCAN10Q96SZ4 725 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-210ENST00000580713 SMOC2Q9H3U7 446 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 ENTPD7Q9NQZ7 604 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 PADI3Q9ULW8 664 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 PCDHB7Q9Y5E2 793 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 CACNA1BQ00975 2339 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 ZMYM6O95789 1325 aa12.35□□□□□ -0.43
TOP3A-210ENST00000580713 TBKBP1A7MCY6 615 aa12.34□□□□□ -0.43
TOP3A-210ENST00000580713 B4E1Z4 1266 aa12.34□□□□□ -0.43
TOP3A-210ENST00000580713 C2CD4DB7Z1M9 353 aa12.34□□□□□ -0.43
TOP3A-210ENST00000580713 STAM2O75886 525 aa12.34□□□□□ -0.43
TOP3A-210ENST00000580713 HOXB8P17481 243 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-210ENST00000580713 TCF7P36402 384 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-210ENST00000580713 CLCN5P51795 746 aa12.34□□□□□ -0.43
TOP3A-210ENST00000580713 MRPS9P82933 396 aaKnown RBP12.34□□□□□ -0.43
TOP3A-210ENST00000580713 TMEM62Q0P6H9 643 aa12.34□□□□□ -0.43
TOP3A-210ENST00000580713 TRAF1Q13077 416 aa12.34□□□□□ -0.43
TOP3A-210ENST00000580713 TPRNQ4KMQ1 711 aa12.34□□□□□ -0.43
TOP3A-210ENST00000580713 CES5AQ6NT32 575 aa12.34□□□□□ -0.43
TOP3A-210ENST00000580713 ZNF589Q86UQ0 364 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-210ENST00000580713 CRIPAKQ8N1N5 446 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms