RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 NPY5RQ15761 445 aa28.16■■■□□ 2.1
CDC42EP4-205ENST00000580315 NSUN7Q8NE18 718 aaKnown RBP28.16■■■□□ 2.1
CDC42EP4-205ENST00000580315 KIF2CQ99661 725 aa28.16■■■□□ 2.1
CDC42EP4-205ENST00000580315 SUGCTQ9HAC7 445 aa28.16■■■□□ 2.1
CDC42EP4-205ENST00000580315 MTUS1Q9ULD2 1270 aa28.16■■■□□ 2.1
CDC42EP4-205ENST00000580315 M0R2N6 131 aa28.15■■■□□ 2.1
CDC42EP4-205ENST00000580315 MARK3P27448 753 aa28.15■■■□□ 2.1
CDC42EP4-205ENST00000580315 ZSCAN31Q96LW9 406 aaPredicted RBP28.15■■■□□ 2.1
CDC42EP4-205ENST00000580315 TGS1Q96RS0 853 aaKnown RBP28.15■■■□□ 2.1
CDC42EP4-205ENST00000580315 CCDC194A0A1B0GVG4 234 aa28.14■■■□□ 2.1
CDC42EP4-205ENST00000580315 LINC01553A4QN01 128 aa28.14■■■□□ 2.1
CDC42EP4-205ENST00000580315 DHX15O43143 795 aaKnown RBP28.14■■■□□ 2.1
CDC42EP4-205ENST00000580315 TREHO43280 583 aa28.14■■■□□ 2.1
CDC42EP4-205ENST00000580315 DTNBO60941 627 aa28.14■■■□□ 2.1
CDC42EP4-205ENST00000580315 FDPSP14324 419 aaKnown RBP28.14■■■□□ 2.1
CDC42EP4-205ENST00000580315 PPFIA1Q13136 1202 aa28.14■■■□□ 2.1
CDC42EP4-205ENST00000580315 FAM117BQ6P1L5 589 aa28.14■■■□□ 2.1
CDC42EP4-205ENST00000580315 PLPPR4Q7Z2D5 763 aa28.14■■■□□ 2.1
CDC42EP4-205ENST00000580315 BRMS1Q9HCU9 246 aa28.14■■■□□ 2.1
CDC42EP4-205ENST00000580315 DOCK5Q9H7D0 1870 aa28.14■■■□□ 2.1
CDC42EP4-205ENST00000580315 ATG7O95352 703 aa28.13■■■□□ 2.09
CDC42EP4-205ENST00000580315 CCNE2O96020 404 aa28.13■■■□□ 2.09
CDC42EP4-205ENST00000580315 THPOP40225 353 aa28.13■■■□□ 2.09
CDC42EP4-205ENST00000580315 STAT5BP51692 787 aa28.13■■■□□ 2.09
CDC42EP4-205ENST00000580315 RABEP1Q15276 862 aa28.13■■■□□ 2.09
CDC42EP4-205ENST00000580315 FAM160B1Q5W0V3 765 aa28.13■■■□□ 2.09
CDC42EP4-205ENST00000580315 MIS18BP1Q6P0N0 1132 aa28.13■■■□□ 2.09
CDC42EP4-205ENST00000580315 LMBR1Q8WVP7 490 aa28.13■■■□□ 2.09
CDC42EP4-205ENST00000580315 UIMC1Q96RL1 719 aa28.13■■■□□ 2.09
CDC42EP4-205ENST00000580315 PCYT2Q99447 389 aa28.13■■■□□ 2.09
CDC42EP4-205ENST00000580315 COL4A4P53420 1690 aaPredicted RBP28.13■■■□□ 2.09
CDC42EP4-205ENST00000580315 BACH1O14867 736 aa28.12■■■□□ 2.09
CDC42EP4-205ENST00000580315 SLC26A2P50443 739 aa28.12■■■□□ 2.09
CDC42EP4-205ENST00000580315 KRT76Q01546 638 aa28.12■■■□□ 2.09
CDC42EP4-205ENST00000580315 TRIM29Q14134 588 aa28.12■■■□□ 2.09
CDC42EP4-205ENST00000580315 ZNF746Q6NUN9 644 aaPredicted RBP28.12■■■□□ 2.09
CDC42EP4-205ENST00000580315 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.12■■■□□ 2.09
CDC42EP4-205ENST00000580315 LENG9Q96B70 501 aa28.12■■■□□ 2.09
CDC42EP4-205ENST00000580315 SH2B1Q9NRF2 756 aaPredicted RBP28.12■■■□□ 2.09
CDC42EP4-205ENST00000580315 TRPC6Q9Y210 931 aa28.12■■■□□ 2.09
CDC42EP4-205ENST00000580315 RSPH10B2B2RC85 870 aa28.11■■■□□ 2.09
CDC42EP4-205ENST00000580315 JAK2O60674 1132 aa28.11■■■□□ 2.09
CDC42EP4-205ENST00000580315 CAND2O75155 1236 aa28.11■■■□□ 2.09
CDC42EP4-205ENST00000580315 RSPH10BP0C881 870 aa28.11■■■□□ 2.09
CDC42EP4-205ENST00000580315 MKRN4PQ13434 485 aaPredicted RBP28.11■■■□□ 2.09
CDC42EP4-205ENST00000580315 GRIK4Q16099 956 aa28.11■■■□□ 2.09
CDC42EP4-205ENST00000580315 Q4G0T1 1027 aa28.11■■■□□ 2.09
CDC42EP4-205ENST00000580315 MOXD1Q6UVY6 613 aa28.11■■■□□ 2.09
CDC42EP4-205ENST00000580315 ABHD15Q6UXT9 468 aa28.11■■■□□ 2.09
CDC42EP4-205ENST00000580315 SMAP1Q8IYB5 467 aaPredicted RBP28.11■■■□□ 2.09
CDC42EP4-205ENST00000580315 DBF4BQ8NFT6 615 aa28.11■■■□□ 2.09
CDC42EP4-205ENST00000580315 GJB4Q9NTQ9 266 aa28.11■■■□□ 2.09
CDC42EP4-205ENST00000580315 INSL6Q9Y581 213 aa28.11■■■□□ 2.09
CDC42EP4-205ENST00000580315 CYP3A7-CYP3A51PA0A087WV96 503 aa28.1■■■□□ 2.09
CDC42EP4-205ENST00000580315 RRN3P2A6NIE6 340 aa28.1■■■□□ 2.09
CDC42EP4-205ENST00000580315 MSH4O15457 936 aa28.1■■■□□ 2.09
CDC42EP4-205ENST00000580315 EDIL3O43854 480 aa28.1■■■□□ 2.09
CDC42EP4-205ENST00000580315 CYP3A7P24462 503 aa28.1■■■□□ 2.09
CDC42EP4-205ENST00000580315 KRT2P35908 639 aa28.1■■■□□ 2.09
CDC42EP4-205ENST00000580315 ADAM17P78536 824 aa28.1■■■□□ 2.09
CDC42EP4-205ENST00000580315 INF2Q27J81 1249 aa28.1■■■□□ 2.09
CDC42EP4-205ENST00000580315 CCDC83Q8IWF9 413 aa28.1■■■□□ 2.09
CDC42EP4-205ENST00000580315 RIT2Q99578 217 aa28.1■■■□□ 2.09
CDC42EP4-205ENST00000580315 LLPHQ9BRT6 129 aaKnown RBP28.1■■■□□ 2.09
CDC42EP4-205ENST00000580315 EPHX3Q9H6B9 360 aa28.1■■■□□ 2.09
CDC42EP4-205ENST00000580315 BRWD1Q9NSI6 2320 aa28.1■■■□□ 2.09
CDC42EP4-205ENST00000580315 IGKV6D-21A0A0A0MT36 114 aa28.09■■■□□ 2.09
CDC42EP4-205ENST00000580315 ST18O60284 1047 aa28.09■■■□□ 2.09
CDC42EP4-205ENST00000580315 TAF2Q6P1X5 1199 aa28.09■■■□□ 2.09
CDC42EP4-205ENST00000580315 ZNF302Q9NR11 478 aa28.09■■■□□ 2.09
CDC42EP4-205ENST00000580315 TUBE1Q9UJT0 475 aa28.09■■■□□ 2.09
CDC42EP4-205ENST00000580315 GAS7O60861 476 aa28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 TDP2O95551 362 aa28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 AMHP03971 560 aa28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 PSAPP07602 524 aa28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 INSRRP14616 1297 aa28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 ST3GAL1Q11201 340 aa28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 PLCB4Q15147 1175 aa28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 PLEKHG4Q58EX7 1191 aa28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 NEK8Q86SG6 692 aa28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 MYOCDQ8IZQ8 938 aa28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 OXER1Q8TDS5 423 aa28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 SLC5A5Q92911 643 aa28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 NAP1L4Q99733 375 aaKnown RBP28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 TEKT3Q9BXF9 490 aa28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 SAMM50Q9Y512 469 aa28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 PCDHA10Q9Y5I2 948 aa28.08■■■□□ 2.09
CDC42EP4-205ENST00000580315 POTEB3A0JP26 581 aa28.07■■■□□ 2.08
CDC42EP4-205ENST00000580315 IGBP1P78318 339 aa28.07■■■□□ 2.08
CDC42EP4-205ENST00000580315 LETM2Q2VYF4 491 aa28.07■■■□□ 2.08
CDC42EP4-205ENST00000580315 LRCH2Q5VUJ6 765 aa28.07■■■□□ 2.08
CDC42EP4-205ENST00000580315 SWSAP1Q6NVH7 229 aa28.07■■■□□ 2.08
CDC42EP4-205ENST00000580315 PDXDC2PQ6P474 469 aa28.07■■■□□ 2.08
CDC42EP4-205ENST00000580315 POTEBQ6S5H4 581 aa28.07■■■□□ 2.08
CDC42EP4-205ENST00000580315 PIK3AP1Q6ZUJ8 805 aa28.07■■■□□ 2.08
CDC42EP4-205ENST00000580315 RSPH3Q86UC2 560 aa28.07■■■□□ 2.08
CDC42EP4-205ENST00000580315 CCDC60Q8IWA6 550 aaPredicted RBP28.07■■■□□ 2.08
CDC42EP4-205ENST00000580315 MBOAT7Q96N66 472 aa28.07■■■□□ 2.08
CDC42EP4-205ENST00000580315 C17orf80Q9BSJ5 609 aa28.07■■■□□ 2.08
CDC42EP4-205ENST00000580315 DDX25Q9UHL0 483 aaKnown RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms