RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ABHD14A-ACY1A0A1B0GW23 586 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 ATP2B1P20020 1258 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 PSEN2P49810 448 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 ZNF200P98182 395 aaPredicted RBP11.47□□□□□ -0.57
SS18-210ENST00000578700 ZRSR1Q15695 479 aaKnown RBP11.47□□□□□ -0.57
SS18-210ENST00000578700 DGKDQ16760 1214 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 LEXMQ3ZCV2 418 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 ZNF618Q5T7W0 954 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 WWC2Q6AWC2 1192 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.47□□□□□ -0.57
SS18-210ENST00000578700 KRT25Q7Z3Z0 450 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 FAM178BQ8IXR5 827 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 MYOCDQ8IZQ8 938 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 KRI1Q8N9T8 703 aaKnown RBP11.47□□□□□ -0.57
SS18-210ENST00000578700 FBXO22Q8NEZ5 403 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 OXER1Q8TDS5 423 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 KAT2BQ92831 832 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 CCDC34Q96HJ3 373 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 PGBD1Q96JS3 809 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 CTAGE1Q96RT6 745 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 PIGSQ96S52 555 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 C17orf80Q9BSJ5 609 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.47□□□□□ -0.57
SS18-210ENST00000578700 DACT1Q9NYF0 836 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 FAM13BQ9NYF5 915 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 GTF2IRD1Q9UHL9 959 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 MYH7BA7E2Y1 1941 aa11.47□□□□□ -0.57
SS18-210ENST00000578700 ESYT2A0FGR8 921 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 FSD2A1L4K1 749 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 SMCO2A6NFE2 343 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 PRR33A8MZF0 331 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 H3BQ06 376 aaPredicted RBP11.46□□□□□ -0.57
SS18-210ENST00000578700 STXBP3O00186 592 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 ZBTB5O15062 677 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 CYTH3O43739 400 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 UPP2O95045 317 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 PARNO95453 639 aaKnown RBP11.46□□□□□ -0.57
SS18-210ENST00000578700 CXCL10P02778 98 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 ZNF286BP0CG31 522 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 CCDC192P0DO97 292 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 LIG1P18858 919 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 CMA1P23946 247 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 ARHGAP1Q07960 439 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 MFSD10Q14728 455 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 STXBP2Q15833 593 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 TTC38Q5R3I4 469 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 ARHGEF16Q5VV41 709 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 CCDC62Q6P9F0 684 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 SASS6Q6UVJ0 657 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 DHX37Q8IY37 1157 aaKnown RBP11.46□□□□□ -0.57
SS18-210ENST00000578700 ADGRF4Q8IZF3 695 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 CLSTN2Q9H4D0 955 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 GRPEL1Q9HAV7 217 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 HOOK1Q9UJC3 728 aaKnown RBP11.46□□□□□ -0.57
SS18-210ENST00000578700 PNMA2Q9UL42 364 aa11.46□□□□□ -0.57
SS18-210ENST00000578700 MYH6P13533 1939 aa11.46□□□□□ -0.58
SS18-210ENST00000578700 EFCAB14O75071 495 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 ALADP13716 330 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 EIF2AK2P19525 551 aaKnown RBP11.45□□□□□ -0.58
SS18-210ENST00000578700 MARCKSP29966 332 aaPredicted RBP11.45□□□□□ -0.58
SS18-210ENST00000578700 ADCY7P51828 1080 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 KIAA0753Q2KHM9 967 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 MCTP2Q6DN12 878 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 PIK3AP1Q6ZUJ8 805 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 SESTD1Q86VW0 696 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 REXO1Q8N1G1 1221 aaKnown RBP11.45□□□□□ -0.58
SS18-210ENST00000578700 DBF4BQ8NFT6 615 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 SYTL5Q8TDW5 730 aaPredicted RBP11.45□□□□□ -0.58
SS18-210ENST00000578700 NSUN6Q8TEA1 469 aaKnown RBP11.45□□□□□ -0.58
SS18-210ENST00000578700 WNT8BQ93098 351 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 RMDN3Q96TC7 470 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 SDF4Q9BRK5 362 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 KATNAL1Q9BW62 490 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 ZMYND12Q9H0C1 365 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 JMJD4Q9H9V9 463 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 INSL6Q9Y581 213 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 MRVI1Q9Y6F6 885 aa11.45□□□□□ -0.58
SS18-210ENST00000578700 MORC2Q9Y6X9 1032 aaPredicted RBP11.45□□□□□ -0.58
SS18-210ENST00000578700 MICAL3Q7RTP6 2002 aa11.44□□□□□ -0.58
SS18-210ENST00000578700 GRXCR2A6NFK2 248 aa11.44□□□□□ -0.58
SS18-210ENST00000578700 ABCB7O75027 752 aa11.44□□□□□ -0.58
SS18-210ENST00000578700 NR1I2O75469 434 aa11.44□□□□□ -0.58
SS18-210ENST00000578700 LGR5O75473 907 aa11.44□□□□□ -0.58
SS18-210ENST00000578700 AMHP03971 560 aa11.44□□□□□ -0.58
SS18-210ENST00000578700 MYCLP12524 364 aaPredicted RBP11.44□□□□□ -0.58
SS18-210ENST00000578700 THPOP40225 353 aa11.44□□□□□ -0.58
SS18-210ENST00000578700 PTK7Q13308 1070 aa11.44□□□□□ -0.58
SS18-210ENST00000578700 NONOQ15233 471 aaKnown RBP eCLIP11.44□□□□□ -0.58
SS18-210ENST00000578700 PTPAQ15257 358 aa11.44□□□□□ -0.58
SS18-210ENST00000578700 CDC37Q16543 378 aaPredicted RBP11.44□□□□□ -0.58
SS18-210ENST00000578700 CAMK4Q16566 473 aa11.44□□□□□ -0.58
SS18-210ENST00000578700 PTPROQ16827 1216 aa11.44□□□□□ -0.58
SS18-210ENST00000578700 ZNF579Q8NAF0 562 aaKnown RBP11.44□□□□□ -0.58
SS18-210ENST00000578700 CUL5Q93034 780 aa11.44□□□□□ -0.58
SS18-210ENST00000578700 COL20A1Q9P218 1284 aa11.44□□□□□ -0.58
SS18-210ENST00000578700 DDX41Q9UJV9 622 aaKnown RBP11.44□□□□□ -0.58
SS18-210ENST00000578700 PCDHB6Q9Y5E3 794 aa11.44□□□□□ -0.58
SS18-210ENST00000578700 A0A1B0GVL5 298 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 RSPH10B2B2RC85 870 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 CSPG5O95196 566 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms