RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 PAK1Q13153 545 aa7.09□□□□□ -1.27
PTPRM-208ENST00000578600 STAT4Q14765 748 aa7.09□□□□□ -1.27
PTPRM-208ENST00000578600 ABHD17CQ6PCB6 329 aa7.09□□□□□ -1.27
PTPRM-208ENST00000578600 NFXL1Q6ZNB6 911 aa7.09□□□□□ -1.27
PTPRM-208ENST00000578600 NAT16Q8N8M0 369 aa7.09□□□□□ -1.27
PTPRM-208ENST00000578600 PI4K2BQ8TCG2 481 aa7.09□□□□□ -1.27
PTPRM-208ENST00000578600 DPF3Q92784 378 aa7.09□□□□□ -1.27
PTPRM-208ENST00000578600 HHIPL1Q96JK4 782 aa7.09□□□□□ -1.27
PTPRM-208ENST00000578600 CCDC136Q96JN2 1154 aa7.09□□□□□ -1.27
PTPRM-208ENST00000578600 CDIP1Q9H305 208 aa7.09□□□□□ -1.27
PTPRM-208ENST00000578600 IFT22Q9H7X7 185 aa7.09□□□□□ -1.27
PTPRM-208ENST00000578600 TNFRSF10DQ9UBN6 386 aa7.09□□□□□ -1.27
PTPRM-208ENST00000578600 SLC5A6Q9Y289 635 aa7.09□□□□□ -1.27
PTPRM-208ENST00000578600 PARP4Q9UKK3 1724 aaKnown RBP7.09□□□□□ -1.27
PTPRM-208ENST00000578600 CASZ1Q86V15 1759 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 KIAA1324LA8MWY0 1029 aaPredicted RBP7.08□□□□□ -1.28
PTPRM-208ENST00000578600 GPR39O43194 453 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 ZEB2O60315 1214 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 ZGLP1P0C6A0 271 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 SRGAP2CP0DJJ0 459 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 CD97P48960 835 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 ZP2Q05996 745 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 LAPTM5Q13571 262 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 KIZQ2M2Z5 673 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 ANGEL2Q5VTE6 544 aaKnown RBP7.08□□□□□ -1.28
PTPRM-208ENST00000578600 HLA-DQA1Q5Y7H0 255 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 ZNF574Q6ZN55 896 aaPredicted RBP7.08□□□□□ -1.28
PTPRM-208ENST00000578600 SLCO6A1Q86UG4 719 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 SPATS2Q86XZ4 545 aaKnown RBP7.08□□□□□ -1.28
PTPRM-208ENST00000578600 KIF18BQ86Y91 864 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 FMNL3Q8IVF7 1028 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 IGSF22Q8N9C0 903 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 PCDH19Q8TAB3 1148 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 ADAMTS10Q9H324 1103 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 CABP5Q9NP86 173 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 CCDC39Q9UFE4 941 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 FBXL7Q9UJT9 491 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 PCDHA2Q9Y5H9 948 aa7.08□□□□□ -1.28
PTPRM-208ENST00000578600 TIMM13Q9Y5L4 95 aaPredicted RBP7.08□□□□□ -1.28
PTPRM-208ENST00000578600 EVC2Q86UK5 1308 aa7.07□□□□□ -1.28
PTPRM-208ENST00000578600 WNT9AO14904 365 aa7.07□□□□□ -1.28
PTPRM-208ENST00000578600 GAS7O60861 476 aa7.07□□□□□ -1.28
PTPRM-208ENST00000578600 PPP1R11O60927 126 aaPredicted RBP7.07□□□□□ -1.28
PTPRM-208ENST00000578600 ALDH1L1O75891 902 aa7.07□□□□□ -1.28
PTPRM-208ENST00000578600 CKMP06732 381 aa7.07□□□□□ -1.28
PTPRM-208ENST00000578600 KIR2DL1P43626 348 aaPredicted RBP7.07□□□□□ -1.28
PTPRM-208ENST00000578600 KIR2DL2P43627 348 aaPredicted RBP7.07□□□□□ -1.28
PTPRM-208ENST00000578600 IL2P60568 153 aa7.07□□□□□ -1.28
PTPRM-208ENST00000578600 TMPRSS15P98073 1019 aa7.07□□□□□ -1.28
PTPRM-208ENST00000578600 ITKQ08881 620 aa7.07□□□□□ -1.28
PTPRM-208ENST00000578600 FAM47CQ5HY64 1035 aa7.07□□□□□ -1.28
PTPRM-208ENST00000578600 RALGPS1Q5JS13 557 aa7.07□□□□□ -1.28
PTPRM-208ENST00000578600 MTMR8Q96EF0 704 aa7.07□□□□□ -1.28
PTPRM-208ENST00000578600 ORAI3Q9BRQ5 295 aa7.07□□□□□ -1.28
PTPRM-208ENST00000578600 ZKSCAN5Q9Y2L8 839 aa7.07□□□□□ -1.28
PTPRM-208ENST00000578600 TNS2Q63HR2 1409 aa7.07□□□□□ -1.28
PTPRM-208ENST00000578600 NSD3Q9BZ95 1437 aa7.07□□□□□ -1.28
PTPRM-208ENST00000578600 MYOM1P52179 1685 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 CGNL1Q0VF96 1302 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 PNPLA7Q6ZV29 1317 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 A0A1W2PQ45 241 aaPredicted RBP7.06□□□□□ -1.28
PTPRM-208ENST00000578600 A0A1W2PQY0 241 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 M0R2C6 588 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 GSTA4O15217 222 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 NPHS1O60500 1241 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 GLRX3O76003 335 aaKnown RBP7.06□□□□□ -1.28
PTPRM-208ENST00000578600 PYGMP11217 842 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 YBX3P16989 372 aaKnown RBP eCLIP7.06□□□□□ -1.28
PTPRM-208ENST00000578600 EPHB1P54762 984 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 ST5P78524 1137 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 LSAMPQ13449 338 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 VSIG10LQ86VR7 867 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 Q8N1Y9 231 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 DNAJC5GQ8N7S2 189 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 NLGN2Q8NFZ4 835 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 CHAMP1Q96JM3 812 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 ALPK1Q96QP1 1244 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 JMJD8Q96S16 334 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 SLAMF8Q9P0V8 285 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 PPARGC1AQ9UBK2 798 aaKnown RBP7.06□□□□□ -1.28
PTPRM-208ENST00000578600 APOBEC2Q9Y235 224 aaKnown RBP7.06□□□□□ -1.28
PTPRM-208ENST00000578600 COQ6Q9Y2Z9 468 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 PPIP5K1Q6PFW1 1433 aa7.06□□□□□ -1.28
PTPRM-208ENST00000578600 CENPJQ9HC77 1338 aaPredicted RBP7.05□□□□□ -1.28
PTPRM-208ENST00000578600 ITSN1Q15811 1721 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 ADGRB1O14514 1584 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 UTRNP46939 3433 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 CPSF1Q10570 1443 aaKnown RBP7.05□□□□□ -1.28
PTPRM-208ENST00000578600 CBX4O00257 560 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 NEMP1O14524 444 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 BPIP17213 487 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 FUT4P22083 530 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 BCL6P41182 706 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 DNM2P50570 870 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 RPL11P62913 178 aaKnown RBP7.05□□□□□ -1.28
PTPRM-208ENST00000578600 DUSP4Q13115 394 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 TTF1Q15361 905 aaPredicted RBP7.05□□□□□ -1.28
PTPRM-208ENST00000578600 ZNF827Q17R98 1081 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 SKOR2Q2VWA4 1001 aaPredicted RBP7.05□□□□□ -1.28
PTPRM-208ENST00000578600 LHFPL2Q6ZUX7 228 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms