RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 RAD9AQ99638 391 aa26.02■■□□□ 1.76
VAPA-205ENST00000578314 ZBED2Q9BTP6 218 aa26.02■■□□□ 1.76
VAPA-205ENST00000578314 KCNJ14Q9UNX9 436 aa26.02■■□□□ 1.76
VAPA-205ENST00000578314 MAFBQ9Y5Q3 323 aaPredicted RBP26.02■■□□□ 1.76
VAPA-205ENST00000578314 XBP1P17861 261 aa26.01■■□□□ 1.75
VAPA-205ENST00000578314 ATP4AP20648 1035 aa26.01■■□□□ 1.75
VAPA-205ENST00000578314 TAP1Q03518 808 aa26.01■■□□□ 1.75
VAPA-205ENST00000578314 TRAPPC12Q8WVT3 735 aa26.01■■□□□ 1.75
VAPA-205ENST00000578314 SLC5A5Q92911 643 aa26.01■■□□□ 1.75
VAPA-205ENST00000578314 MYO9BQ13459 2157 aa26■■□□□ 1.75
VAPA-205ENST00000578314 ARHGEF15O94989 841 aa26■■□□□ 1.75
VAPA-205ENST00000578314 AMHP03971 560 aa26■■□□□ 1.75
VAPA-205ENST00000578314 PSAPP07602 524 aa26■■□□□ 1.75
VAPA-205ENST00000578314 NONOQ15233 471 aaKnown RBP eCLIP26■■□□□ 1.752e-7■■□□□ 12
VAPA-205ENST00000578314 MTHFD1LQ6UB35 978 aa26■■□□□ 1.75
VAPA-205ENST00000578314 KRT25Q7Z3Z0 450 aa26■■□□□ 1.75
VAPA-205ENST00000578314 GTF3C6Q969F1 213 aa26■■□□□ 1.75
VAPA-205ENST00000578314 MBOAT7Q96N66 472 aa26■■□□□ 1.75
VAPA-205ENST00000578314 IFIH1Q9BYX4 1025 aaKnown RBP26■■□□□ 1.75
VAPA-205ENST00000578314 TCEAL9Q9UHQ7 104 aa26■■□□□ 1.75
VAPA-205ENST00000578314 SMIM35A0A1B0GVV1 85 aa25.99■■□□□ 1.75
VAPA-205ENST00000578314 LARGE1O95461 756 aa25.99■■□□□ 1.75
VAPA-205ENST00000578314 MRPS6P82932 125 aaKnown RBP25.99■■□□□ 1.75
VAPA-205ENST00000578314 LPIN1Q14693 890 aa25.99■■□□□ 1.75
VAPA-205ENST00000578314 ZNF484Q5JVG2 852 aa25.99■■□□□ 1.75
VAPA-205ENST00000578314 IER5Q5VY09 327 aa25.99■■□□□ 1.75
VAPA-205ENST00000578314 MOXD1Q6UVY6 613 aa25.99■■□□□ 1.75
VAPA-205ENST00000578314 NME8Q8N427 588 aa25.99■■□□□ 1.75
VAPA-205ENST00000578314 NECAB1Q8N987 351 aa25.99■■□□□ 1.75
VAPA-205ENST00000578314 WASF1Q92558 559 aa25.99■■□□□ 1.75
VAPA-205ENST00000578314 FAM49AQ9H0Q0 323 aaPredicted RBP25.99■■□□□ 1.75
VAPA-205ENST00000578314 ORC3Q9UBD5 711 aaPredicted RBP25.99■■□□□ 1.75
VAPA-205ENST00000578314 CDY2AQ9Y6F7 541 aa25.99■■□□□ 1.75
VAPA-205ENST00000578314 COL1A2P08123 1366 aa25.98■■□□□ 1.75
VAPA-205ENST00000578314 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.98■■□□□ 1.75
VAPA-205ENST00000578314 WDR64B1ANS9 1081 aa25.98■■□□□ 1.75
VAPA-205ENST00000578314 GHRP10912 638 aa25.98■■□□□ 1.75
VAPA-205ENST00000578314 FDPSP14324 419 aaKnown RBP25.98■■□□□ 1.75
VAPA-205ENST00000578314 KLRC1P26715 233 aa25.98■■□□□ 1.75
VAPA-205ENST00000578314 FBXO47Q5MNV8 452 aa25.98■■□□□ 1.75
VAPA-205ENST00000578314 BBXQ8WY36 941 aaPredicted RBP25.98■■□□□ 1.75
VAPA-205ENST00000578314 SQORQ9Y6N5 450 aa25.98■■□□□ 1.75
VAPA-205ENST00000578314 SPTBN5Q9NRC6 3674 aaKnown RBP25.98■■□□□ 1.75
VAPA-205ENST00000578314 TRANK1O15050 2925 aa25.98■■□□□ 1.75
VAPA-205ENST00000578314 LCHNA4D1U4 455 aa25.97■■□□□ 1.75
VAPA-205ENST00000578314 ZBTB42B2RXF5 422 aa25.97■■□□□ 1.75
VAPA-205ENST00000578314 DTNBO60941 627 aa25.97■■□□□ 1.75
VAPA-205ENST00000578314 TDP2O95551 362 aa25.97■■□□□ 1.75
VAPA-205ENST00000578314 IGFBP4P22692 258 aa25.97■■□□□ 1.75
VAPA-205ENST00000578314 MYOCDQ8IZQ8 938 aa25.97■■□□□ 1.75
VAPA-205ENST00000578314 PPM1EQ8WY54 764 aa25.97■■□□□ 1.75
VAPA-205ENST00000578314 TOP1MTQ969P6 601 aa25.97■■□□□ 1.75
VAPA-205ENST00000578314 DISC1Q9NRI5 854 aa25.97■■□□□ 1.75
VAPA-205ENST00000578314 GJB4Q9NTQ9 266 aa25.97■■□□□ 1.75
VAPA-205ENST00000578314 GABBR1Q9UBS5 961 aa25.97■■□□□ 1.75
VAPA-205ENST00000578314 INSL6Q9Y581 213 aa25.97■■□□□ 1.75
VAPA-205ENST00000578314 GAS7O60861 476 aa25.96■■□□□ 1.75
VAPA-205ENST00000578314 PSMD10O75832 226 aa25.96■■□□□ 1.75
VAPA-205ENST00000578314 POU3F3P20264 500 aaPredicted RBP25.96■■□□□ 1.75
VAPA-205ENST00000578314 HTRA4P83105 476 aaPredicted RBP25.96■■□□□ 1.75
VAPA-205ENST00000578314 INF2Q27J81 1249 aa25.96■■□□□ 1.75
VAPA-205ENST00000578314 C8orf34Q49A92 452 aa25.96■■□□□ 1.75
VAPA-205ENST00000578314 LRCH2Q5VUJ6 765 aa25.96■■□□□ 1.75
VAPA-205ENST00000578314 FAM117BQ6P1L5 589 aa25.96■■□□□ 1.75
VAPA-205ENST00000578314 TEKT3Q9BXF9 490 aa25.96■■□□□ 1.75
VAPA-205ENST00000578314 CERS4Q9HA82 394 aa25.96■■□□□ 1.75
VAPA-205ENST00000578314 SAMM50Q9Y512 469 aa25.96■■□□□ 1.75
VAPA-205ENST00000578314 KAT6AQ92794 2004 aa25.96■■□□□ 1.75
VAPA-205ENST00000578314 IGSF9BQ9UPX0 1349 aa25.95■■□□□ 1.75
VAPA-205ENST00000578314 PTPRSQ13332 1948 aa25.95■■□□□ 1.74
VAPA-205ENST00000578314 CCDC194A0A1B0GVG4 234 aa25.95■■□□□ 1.74
VAPA-205ENST00000578314 SFNP31947 248 aa25.95■■□□□ 1.74
VAPA-205ENST00000578314 B3GNT9Q6UX72 402 aa25.95■■□□□ 1.74
VAPA-205ENST00000578314 TSHZ1Q6ZSZ6 1077 aa25.95■■□□□ 1.74
VAPA-205ENST00000578314 CKAP2LQ8IYA6 745 aa25.95■■□□□ 1.74
VAPA-205ENST00000578314 NSUN7Q8NE18 718 aaKnown RBP25.95■■□□□ 1.74
VAPA-205ENST00000578314 ETNPPLQ8TBG4 499 aa25.95■■□□□ 1.74
VAPA-205ENST00000578314 CELF4Q9BZC1 486 aaKnown RBP25.95■■□□□ 1.74
VAPA-205ENST00000578314 TRPV2Q9Y5S1 764 aa25.95■■□□□ 1.74
VAPA-205ENST00000578314 KDM3AQ9Y4C1 1321 aa25.94■■□□□ 1.74
VAPA-205ENST00000578314 EPOPA6NHQ4 379 aa25.94■■□□□ 1.74
VAPA-205ENST00000578314 JAK3P52333 1124 aa25.94■■□□□ 1.74
VAPA-205ENST00000578314 KIAA0319LQ8IZA0 1049 aa25.94■■□□□ 1.74
VAPA-205ENST00000578314 RDM1Q8NG50 284 aa25.94■■□□□ 1.74
VAPA-205ENST00000578314 OXER1Q8TDS5 423 aa25.94■■□□□ 1.74
VAPA-205ENST00000578314 ARNTL2Q8WYA1 636 aa25.94■■□□□ 1.74
VAPA-205ENST00000578314 GJA10Q969M2 543 aa25.94■■□□□ 1.74
VAPA-205ENST00000578314 FAM167AQ96KS9 214 aa25.94■■□□□ 1.74
VAPA-205ENST00000578314 UNC45AQ9H3U1 944 aa25.94■■□□□ 1.74
VAPA-205ENST00000578314 PRDM6Q9NQX0 595 aa25.94■■□□□ 1.74
VAPA-205ENST00000578314 LINC01553A4QN01 128 aa25.93■■□□□ 1.74
VAPA-205ENST00000578314 M0QZ92 97 aa25.93■■□□□ 1.74
VAPA-205ENST00000578314 RFXAPO00287 272 aa25.93■■□□□ 1.74
VAPA-205ENST00000578314 TMEM62Q0P6H9 643 aa25.93■■□□□ 1.74
VAPA-205ENST00000578314 PPP4R3AQ6IN85 833 aa25.93■■□□□ 1.74
VAPA-205ENST00000578314 SPRED2Q7Z698 418 aa25.93■■□□□ 1.74
VAPA-205ENST00000578314 SP7Q8TDD2 431 aaPredicted RBP25.93■■□□□ 1.74
VAPA-205ENST00000578314 AGO3Q9H9G7 860 aaKnown RBP25.93■■□□□ 1.74
VAPA-205ENST00000578314 DDX25Q9UHL0 483 aaKnown RBP25.93■■□□□ 1.74
VAPA-205ENST00000578314 ENPP3O14638 875 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms