RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 GJA10Q969M2 543 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 ARMC5Q96C12 935 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 UIMC1Q96RL1 719 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 PYM1Q9BRP8 204 aaKnown RBP12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 POLR3CQ9BUI4 534 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 TUFT1Q9NNX1 390 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 XPNPEP3Q9NQH7 507 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 FAM13BQ9NYF5 915 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 PLA2G2EQ9NZK7 142 aa12.56□□□□□ -0.4
TRAPPC8-204ENST00000578252 A6NJR5 290 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 DDX11L8A8MPP1 907 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 DYNC1LI2O43237 492 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 ADCY6O43306 1168 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 ZEB2O60315 1214 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 KPNA6O60684 536 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 PPFIA4O75335 1185 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 P4HBP07237 508 aaKnown RBP12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 SUPT20HL2P0C7V6 817 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 HOXD8P13378 290 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 CAPN2P17655 700 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 CMA1P23946 247 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 RPA1P27694 616 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 MLLT3P42568 568 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 SLC26A2P50443 739 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 UBE2HP62256 183 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 SP4Q02446 784 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 DGKDQ16760 1214 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 HSDL1Q3SXM5 330 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 GJC2Q5T442 439 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 RESP18Q5W5W9 173 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 ABHD15Q6UXT9 468 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 SNX29Q8TEQ0 813 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 MRPS27Q92552 414 aaKnown RBP12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 ATP6V0A1Q93050 837 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 CALML4Q96GE6 196 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 ZNF333Q96JL9 665 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 CLIC6Q96NY7 704 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 GPR20Q99678 358 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 EIF2AK1Q9BQI3 630 aaKnown RBP12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 CCSER1Q9C0I3 900 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 NT5C3AQ9H0P0 336 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 AZI2Q9H6S1 392 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 CCDC39Q9UFE4 941 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 MYH9P35579 1960 aaKnown RBP12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 EMSYQ7Z589 1322 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 SYNRGQ9UMZ2 1314 aa12.55□□□□□ -0.4
TRAPPC8-204ENST00000578252 IGKV6D-21A0A0A0MT36 114 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 GSTTP1A0A1W2PQM5 241 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 EML1O00423 815 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 BACH1O14867 736 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 PRPF40AO75400 957 aaKnown RBP12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 LGR5O75473 907 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 MMP3P08254 477 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 CCL5P13501 91 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 CST5P28325 142 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 MCM4P33991 863 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 TCF7P36402 384 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 CCT6AP40227 531 aaKnown RBP12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 QARSP47897 775 aaKnown RBP12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 GRIN1Q05586 938 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 HYIQ5T013 277 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 TMEM63BQ5T3F8 832 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 SHC4Q6S5L8 630 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 RNF180Q86T96 592 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 CABP7Q86V35 215 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 PACS2Q86VP3 889 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 RASSF8Q8NHQ8 419 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 AFG1LQ8WV93 481 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 SYMPKQ92797 1274 aaKnown RBP12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 CDK5RAP3Q96JB5 506 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 ZFRQ96KR1 1074 aaKnown RBP12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 BCAS3Q9H6U6 928 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 PAK6Q9NQU5 681 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 IGSF9BQ9UPX0 1349 aa12.54□□□□□ -0.4
TRAPPC8-204ENST00000578252 FAM237AA0A1B0GTK4 181 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 SORBS3O60504 671 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 ADAMTS4O75173 837 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 LYPLA2O95372 231 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 C6orf222P0C671 652 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 PRSS12P56730 875 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 PSMC5P62195 406 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 FSCN1Q16658 493 aaKnown RBP12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 CCDC73Q6ZRK6 1079 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 PLPPR4Q7Z2D5 763 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 FSIP1Q8NA03 581 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 PCSK9Q8NBP7 692 aaKnown RBP12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 ARRDC4Q8NCT1 418 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 AFAP1L1Q8TED9 768 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 LENG1Q96BZ8 264 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 DYDC2Q96IM9 177 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 HSD17B14Q9BPX1 270 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 MMTAG2Q9BU76 263 aaKnown RBP12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 RNF208Q9H0X6 261 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 UNC93B1Q9H1C4 597 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 SMARCAD1Q9H4L7 1026 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 ZSWIM4Q9H7M6 989 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 ZNF302Q9NR11 478 aa12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 ZNF215Q9UL58 517 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC8-204ENST00000578252 HTTP42858 3142 aa12.52□□□□□ -0.4
TRAPPC8-204ENST00000578252 PP2D1A8MPX8 630 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms