RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 C22orf23Q9BZE7 217 aa18.24■□□□□ 0.51
VAPA-204ENST00000577901 NSUN3Q9H649 340 aaKnown RBP18.24■□□□□ 0.51
VAPA-204ENST00000577901 UPF2Q9HAU5 1272 aaKnown RBP18.24■□□□□ 0.51
VAPA-204ENST00000577901 ESYT2A0FGR8 921 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 PFKFB2O60825 505 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 PPFIA3O75145 1194 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 GHRP10912 638 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 KCNA2P16389 499 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 GNA11P29992 359 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 CTNNB1P35222 781 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 MGAT3Q09327 533 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 PPFIA1Q13136 1202 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 LPIN1Q14693 890 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 COL19A1Q14993 1142 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 MCTP2Q6DN12 878 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 EP400NLQ6ZTU2 488 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 RSPH3Q86UC2 560 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 CCDC148Q8NFR7 591 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 ZMYND12Q9H0C1 365 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 ERAP1Q9NZ08 941 aa18.23■□□□□ 0.51
VAPA-204ENST00000577901 BRWD1Q9NSI6 2320 aa18.22■□□□□ 0.51
VAPA-204ENST00000577901 GSTTP1A0A1W2PQM5 241 aa18.22■□□□□ 0.51
VAPA-204ENST00000577901 DEXIO95424 95 aa18.22■□□□□ 0.51
VAPA-204ENST00000577901 ITGB5P18084 799 aa18.22■□□□□ 0.51
VAPA-204ENST00000577901 MARK3P27448 753 aa18.22■□□□□ 0.51
VAPA-204ENST00000577901 SCRN1Q12765 414 aa18.22■□□□□ 0.51
VAPA-204ENST00000577901 AP3B2Q13367 1082 aa18.22■□□□□ 0.51
VAPA-204ENST00000577901 GRIK4Q16099 956 aa18.22■□□□□ 0.51
VAPA-204ENST00000577901 BICD2Q8TD16 824 aa18.22■□□□□ 0.51
VAPA-204ENST00000577901 SEPT1Q8WYJ6 367 aa18.22■□□□□ 0.51
VAPA-204ENST00000577901 SH3GLB2Q9NR46 395 aa18.22■□□□□ 0.51
VAPA-204ENST00000577901 TUBE1Q9UJT0 475 aa18.22■□□□□ 0.51
VAPA-204ENST00000577901 C5orf67F2Z3F1 127 aa18.21■□□□□ 0.51
VAPA-204ENST00000577901 ENPP3O14638 875 aa18.21■□□□□ 0.51
VAPA-204ENST00000577901 RB1P06400 928 aa18.21■□□□□ 0.51
VAPA-204ENST00000577901 ALADP13716 330 aa18.21■□□□□ 0.51
VAPA-204ENST00000577901 MTMR1Q13613 665 aa18.21■□□□□ 0.51
VAPA-204ENST00000577901 DNAJB3Q8WWF6 145 aa18.21■□□□□ 0.51
VAPA-204ENST00000577901 GLG1Q92896 1179 aa18.21■□□□□ 0.51
VAPA-204ENST00000577901 C11orf84Q9BUA3 381 aaPredicted RBP18.21■□□□□ 0.51
VAPA-204ENST00000577901 CLDND1Q9NY35 253 aa18.21■□□□□ 0.51
VAPA-204ENST00000577901 FAM50BQ9Y247 325 aa18.21■□□□□ 0.51
VAPA-204ENST00000577901 GTF3C3Q9Y5Q9 886 aa18.21■□□□□ 0.51
VAPA-204ENST00000577901 UBIAD1Q9Y5Z9 338 aa18.21■□□□□ 0.51
VAPA-204ENST00000577901 ADGRA3Q8IWK6 1321 aa18.21■□□□□ 0.51
VAPA-204ENST00000577901 RALGAPA2Q2PPJ7 1873 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 MBLAC1A4D2B0 266 aaPredicted RBP18.2■□□□□ 0.5
VAPA-204ENST00000577901 PRR33A8MZF0 331 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 GRM6O15303 877 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 LINC00271P0C7V0 271 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 BMPR1AP36894 532 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 CLK2P49760 499 aaKnown RBP18.2■□□□□ 0.5
VAPA-204ENST00000577901 NLRP5P59047 1200 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 MARCH8Q5T0T0 291 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 ANO3Q9BYT9 981 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 LMAN2LQ9H0V9 348 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 SMARCAD1Q9H4L7 1026 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 RC3H2Q9HBD1 1191 aaKnown RBP18.2■□□□□ 0.5
VAPA-204ENST00000577901 TMEM260Q9NX78 707 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 PKD2L1Q9P0L9 805 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 VPS54Q9P1Q0 977 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 RWDD3Q9Y3V2 267 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 CDY2AQ9Y6F7 541 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 NLRC5Q86WI3 1866 aa18.2■□□□□ 0.5
VAPA-204ENST00000577901 MAFGO15525 162 aa18.19■□□□□ 0.5
VAPA-204ENST00000577901 NCK2O43639 380 aa18.19■□□□□ 0.5
VAPA-204ENST00000577901 RBM25P49756 843 aaKnown RBP18.19■□□□□ 0.5
VAPA-204ENST00000577901 IGBP1P78318 339 aa18.19■□□□□ 0.5
VAPA-204ENST00000577901 FBXO47Q5MNV8 452 aa18.19■□□□□ 0.5
VAPA-204ENST00000577901 JAKMIP3Q5VZ66 844 aa18.19■□□□□ 0.5
VAPA-204ENST00000577901 TSHZ1Q6ZSZ6 1077 aa18.19■□□□□ 0.5
VAPA-204ENST00000577901 FAM177A1Q8N128 213 aaPredicted RBP18.19■□□□□ 0.5
VAPA-204ENST00000577901 REXO1Q8N1G1 1221 aaKnown RBP18.19■□□□□ 0.5
VAPA-204ENST00000577901 CLP1Q92989 425 aaKnown RBP18.19■□□□□ 0.5
VAPA-204ENST00000577901 JADE2Q9NQC1 790 aa18.19■□□□□ 0.5
VAPA-204ENST00000577901 ZNF76P36508 570 aa18.18■□□□□ 0.5
VAPA-204ENST00000577901 LTBRP36941 435 aa18.18■□□□□ 0.5
VAPA-204ENST00000577901 MRPS6P82932 125 aaKnown RBP18.18■□□□□ 0.5
VAPA-204ENST00000577901 ZP2Q05996 745 aa18.18■□□□□ 0.5
VAPA-204ENST00000577901 BTG3Q14201 252 aaPredicted RBP18.18■□□□□ 0.5
VAPA-204ENST00000577901 ME3Q16798 604 aa18.18■□□□□ 0.5
VAPA-204ENST00000577901 ZNF689Q96CS4 500 aaPredicted RBP18.18■□□□□ 0.5
VAPA-204ENST00000577901 PGBD1Q96JS3 809 aa18.18■□□□□ 0.5
VAPA-204ENST00000577901 PRKAG3Q9UGI9 489 aa18.18■□□□□ 0.5
VAPA-204ENST00000577901 POTEB3A0JP26 581 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 RRN3P2A6NIE6 340 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 DCXO43602 365 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 DGKIO75912 1065 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 RPLP2P05387 115 aaKnown RBP18.17■□□□□ 0.5
VAPA-204ENST00000577901 XBP1P17861 261 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 SREBF1P36956 1147 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 HYAL1Q12794 435 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 CSPP1Q1MSJ5 1256 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 CTC1Q2NKJ3 1217 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 POTEBQ6S5H4 581 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 NECAB1Q8N987 351 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 WASF1Q92558 559 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 GTF3C6Q969F1 213 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 ZBTB10Q96DT7 871 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 MXRA8Q9BRK3 442 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms