RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 SAMD3Q8N6K7 520 aa16.34■□□□□ 0.21
PPP4R1-206ENST00000577779 ESR2Q92731 530 aa16.34■□□□□ 0.21
PPP4R1-206ENST00000577779 NECTIN4Q96NY8 510 aa16.34■□□□□ 0.21
PPP4R1-206ENST00000577779 PADI3Q9ULW8 664 aa16.34■□□□□ 0.21
PPP4R1-206ENST00000577779 PCDHA1Q9Y5I3 950 aa16.34■□□□□ 0.21
PPP4R1-206ENST00000577779 TRIM6-TRIM34B2RNG4 842 aa16.33■□□□□ 0.2
PPP4R1-206ENST00000577779 SPATA31C2B4DYI2 1134 aa16.33■□□□□ 0.2
PPP4R1-206ENST00000577779 GCOM1H8Y6P7 765 aaPredicted RBP16.33■□□□□ 0.2
PPP4R1-206ENST00000577779 POLR2MP0CAP2 368 aa16.33■□□□□ 0.2
PPP4R1-206ENST00000577779 PAK2Q13177 524 aa16.33■□□□□ 0.2
PPP4R1-206ENST00000577779 IER5Q5VY09 327 aa16.33■□□□□ 0.2
PPP4R1-206ENST00000577779 CWF19L1Q69YN2 538 aaKnown RBP16.33■□□□□ 0.2
PPP4R1-206ENST00000577779 TBC1D10CQ8IV04 446 aa16.33■□□□□ 0.2
PPP4R1-206ENST00000577779 INPP4AQ96PE3 977 aaPredicted RBP16.33■□□□□ 0.2
PPP4R1-206ENST00000577779 SEMA4AQ9H3S1 761 aa16.33■□□□□ 0.2
PPP4R1-206ENST00000577779 DCTPP1Q9H773 170 aa16.33■□□□□ 0.2
PPP4R1-206ENST00000577779 ENTPD7Q9NQZ7 604 aa16.33■□□□□ 0.2
PPP4R1-206ENST00000577779 SQORQ9Y6N5 450 aa16.33■□□□□ 0.2
PPP4R1-206ENST00000577779 USP24Q9UPU5 2620 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 MBLAC1A4D2B0 266 aaPredicted RBP16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 TBKBP1A7MCY6 615 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 FIBPO43427 364 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 PI15O43692 258 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 PPP1R11O60927 126 aaPredicted RBP16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 ZMYM6O95789 1325 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 AOC1P19801 751 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 NEDD4P46934 1319 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 MRPS9P82933 396 aaKnown RBP16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 ITIH3Q06033 890 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 SEMA3FQ13275 785 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 FNDC1Q4ZHG4 1894 aaPredicted RBP16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 CCDC178Q5BJE1 867 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 IQCA1Q86XH1 822 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 LOXHD1Q8IVV2 1947 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 TDRD5Q8NAT2 981 aaKnown RBP16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 DTWD2Q8NBA8 298 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 COLGALT1Q8NBJ5 622 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 CASP10Q92851 521 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 TCF25Q9BQ70 676 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 HINFPQ9BQA5 517 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 FAM49AQ9H0Q0 323 aaPredicted RBP16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 ADAM7Q9H2U9 754 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 RNF41Q9H4P4 317 aaPredicted RBP16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 HELLSQ9NRZ9 838 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 LIMD1Q9UGP4 676 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 PCDHB7Q9Y5E2 793 aa16.32■□□□□ 0.2
PPP4R1-206ENST00000577779 HIDE1A8MVS5 230 aa16.31■□□□□ 0.2
PPP4R1-206ENST00000577779 M0QZ92 97 aa16.31■□□□□ 0.2
PPP4R1-206ENST00000577779 STAM2O75886 525 aa16.31■□□□□ 0.2
PPP4R1-206ENST00000577779 RPLP2P05387 115 aaKnown RBP16.31■□□□□ 0.2
PPP4R1-206ENST00000577779 MARK3P27448 753 aa16.31■□□□□ 0.2
PPP4R1-206ENST00000577779 TCF7P36402 384 aaPredicted RBP16.31■□□□□ 0.2
PPP4R1-206ENST00000577779 SARSP49591 514 aaKnown RBP16.31■□□□□ 0.2
PPP4R1-206ENST00000577779 MARCH8Q5T0T0 291 aa16.31■□□□□ 0.2
PPP4R1-206ENST00000577779 ZDHHC14Q8IZN3 488 aa16.31■□□□□ 0.2
PPP4R1-206ENST00000577779 OTUD7AQ8TE49 926 aaPredicted RBP16.31■□□□□ 0.2
PPP4R1-206ENST00000577779 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
PPP4R1-206ENST00000577779 HCSTQ9UBK5 93 aa16.31■□□□□ 0.2
PPP4R1-206ENST00000577779 PUF60Q9UHX1 559 aaKnown RBP16.31■□□□□ 0.2
PPP4R1-206ENST00000577779 LZTS1Q9Y250 596 aa16.31■□□□□ 0.2
PPP4R1-206ENST00000577779 TRPV2Q9Y5S1 764 aa16.31■□□□□ 0.2
PPP4R1-206ENST00000577779 ATRXP46100 2492 aa16.3■□□□□ 0.2
PPP4R1-206ENST00000577779 ZBTB5O15062 677 aa16.3■□□□□ 0.2
PPP4R1-206ENST00000577779 MTHFRP42898 656 aa16.3■□□□□ 0.2
PPP4R1-206ENST00000577779 IGBP1P78318 339 aa16.3■□□□□ 0.2
PPP4R1-206ENST00000577779 TMEM62Q0P6H9 643 aa16.3■□□□□ 0.2
PPP4R1-206ENST00000577779 MRPS27Q92552 414 aaKnown RBP16.3■□□□□ 0.2
PPP4R1-206ENST00000577779 ZBTB10Q96DT7 871 aa16.3■□□□□ 0.2
PPP4R1-206ENST00000577779 RTP3Q9BQQ7 232 aa16.3■□□□□ 0.2
PPP4R1-206ENST00000577779 NGRNQ9NPE2 291 aaKnown RBP16.3■□□□□ 0.2
PPP4R1-206ENST00000577779 TYW1Q9NV66 732 aaKnown RBP16.3■□□□□ 0.2
PPP4R1-206ENST00000577779 ERAP1Q9NZ08 941 aa16.3■□□□□ 0.2
PPP4R1-206ENST00000577779 IGSF9BQ9UPX0 1349 aa16.29■□□□□ 0.2
PPP4R1-206ENST00000577779 ARP10275 920 aa16.29■□□□□ 0.2
PPP4R1-206ENST00000577779 NPR3P17342 541 aa16.29■□□□□ 0.2
PPP4R1-206ENST00000577779 HNRNPUQ00839 825 aaKnown RBP eCLIP16.29■□□□□ 0.2
PPP4R1-206ENST00000577779 MCMDC2Q4G0Z9 681 aa16.29■□□□□ 0.2
PPP4R1-206ENST00000577779 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
PPP4R1-206ENST00000577779 STAG2Q8N3U4 1231 aa16.29■□□□□ 0.2
PPP4R1-206ENST00000577779 CYP2W1Q8TAV3 490 aa16.29■□□□□ 0.2
PPP4R1-206ENST00000577779 FAM227BQ96M60 508 aa16.29■□□□□ 0.2
PPP4R1-206ENST00000577779 ZSCAN10Q96SZ4 725 aaPredicted RBP16.29■□□□□ 0.2
PPP4R1-206ENST00000577779 SENP7Q9BQF6 1050 aa16.29■□□□□ 0.2
PPP4R1-206ENST00000577779 TMX1Q9H3N1 280 aa16.29■□□□□ 0.2
PPP4R1-206ENST00000577779 DLL3Q9NYJ7 618 aa16.29■□□□□ 0.2
PPP4R1-206ENST00000577779 R4GN57 208 aa16.29■□□□□ 0.2
PPP4R1-206ENST00000577779 GPR179Q6PRD1 2367 aa16.28■□□□□ 0.2
PPP4R1-206ENST00000577779 ANKRD11Q6UB99 2663 aaPredicted RBP16.28■□□□□ 0.2
PPP4R1-206ENST00000577779 A0A0D9SFI3 127 aa16.28■□□□□ 0.2
PPP4R1-206ENST00000577779 WEE2P0C1S8 567 aa16.28■□□□□ 0.2
PPP4R1-206ENST00000577779 LAG3P18627 525 aa16.28■□□□□ 0.2
PPP4R1-206ENST00000577779 MX1P20591 662 aa16.28■□□□□ 0.2
PPP4R1-206ENST00000577779 TMEM266Q2M3C6 531 aa16.28■□□□□ 0.2
PPP4R1-206ENST00000577779 FAM102BQ5T8I3 360 aa16.28■□□□□ 0.2
PPP4R1-206ENST00000577779 TMC7Q7Z402 723 aa16.28■□□□□ 0.2
PPP4R1-206ENST00000577779 ENAHQ8N8S7 591 aaPredicted RBP16.28■□□□□ 0.2
PPP4R1-206ENST00000577779 GIMAP8Q8ND71 665 aaPredicted RBP16.28■□□□□ 0.2
PPP4R1-206ENST00000577779 GLG1Q92896 1179 aa16.28■□□□□ 0.2
PPP4R1-206ENST00000577779 MTMR8Q96EF0 704 aa16.28■□□□□ 0.2
PPP4R1-206ENST00000577779 HCFC2Q9Y5Z7 792 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms