RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 C19orf67A6NJJ6 358 aa16.2■□□□□ 0.18
SMARCD2-205ENST00000577686 BACH1O14867 736 aa16.2■□□□□ 0.18
SMARCD2-205ENST00000577686 MBTPS2O43462 519 aa16.2■□□□□ 0.18
SMARCD2-205ENST00000577686 SRGAP2BP0DMP2 458 aa16.2■□□□□ 0.18
SMARCD2-205ENST00000577686 ACTR2P61160 394 aa16.2■□□□□ 0.18
SMARCD2-205ENST00000577686 CEP55Q53EZ4 464 aa16.2■□□□□ 0.18
SMARCD2-205ENST00000577686 CREB3L3Q68CJ9 461 aa16.2■□□□□ 0.18
SMARCD2-205ENST00000577686 MCTP2Q6DN12 878 aa16.2■□□□□ 0.18
SMARCD2-205ENST00000577686 POTEBQ6S5H4 581 aa16.2■□□□□ 0.18
SMARCD2-205ENST00000577686 RIC8AQ9NPQ8 531 aa16.2■□□□□ 0.18
SMARCD2-205ENST00000577686 C1orf112Q9NSG2 853 aa16.2■□□□□ 0.18
SMARCD2-205ENST00000577686 PADI3Q9ULW8 664 aa16.2■□□□□ 0.18
SMARCD2-205ENST00000577686 PLAGL2Q9UPG8 496 aa16.2■□□□□ 0.18
SMARCD2-205ENST00000577686 TELO2Q9Y4R8 837 aa16.2■□□□□ 0.18
SMARCD2-205ENST00000577686 PCDHB12Q9Y5F1 795 aa16.2■□□□□ 0.18
SMARCD2-205ENST00000577686 COL1A2P08123 1366 aa16.19■□□□□ 0.18
SMARCD2-205ENST00000577686 HBP1O60381 514 aa16.19■□□□□ 0.18
SMARCD2-205ENST00000577686 UBE3AQ05086 875 aa16.19■□□□□ 0.18
SMARCD2-205ENST00000577686 PLCB4Q15147 1175 aa16.19■□□□□ 0.18
SMARCD2-205ENST00000577686 CLUL1Q15846 466 aa16.19■□□□□ 0.18
SMARCD2-205ENST00000577686 RTN1Q16799 776 aa16.19■□□□□ 0.18
SMARCD2-205ENST00000577686 SPOUT1Q5T280 376 aaKnown RBP16.19■□□□□ 0.18
SMARCD2-205ENST00000577686 NIPA1Q7RTP0 329 aa16.19■□□□□ 0.18
SMARCD2-205ENST00000577686 ESYT1Q9BSJ8 1104 aa16.19■□□□□ 0.18
SMARCD2-205ENST00000577686 ANO3Q9BYT9 981 aa16.19■□□□□ 0.18
SMARCD2-205ENST00000577686 LSG1Q9H089 658 aaKnown RBP16.19■□□□□ 0.18
SMARCD2-205ENST00000577686 AGO3Q9H9G7 860 aaKnown RBP16.19■□□□□ 0.18
SMARCD2-205ENST00000577686 PCDHB7Q9Y5E2 793 aa16.19■□□□□ 0.18
SMARCD2-205ENST00000577686 MRPL42Q9Y6G3 142 aaKnown RBP16.19■□□□□ 0.18
SMARCD2-205ENST00000577686 REV3LO60673 3130 aa16.19■□□□□ 0.18
SMARCD2-205ENST00000577686 BRWD1Q9NSI6 2320 aa16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 KAT6AQ92794 2004 aa16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 hCG_1642624A0A1W2PR95 340 aa16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 DENND3A2RUS2 1198 aa16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 STXBP3O00186 592 aa16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 ZBTB43O43298 467 aa16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 CSPG5O95196 566 aa16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 LINC00271P0C7V0 271 aa16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 SARSP49591 514 aaKnown RBP16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 KRT32Q14532 448 aa16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 PAN2Q504Q3 1202 aaKnown RBP16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 WWC2Q6AWC2 1192 aa16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 MIS18BP1Q6P0N0 1132 aa16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 EFHBQ8N7U6 833 aa16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 CCDC12Q8WUD4 166 aaPredicted RBP16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 ALG13Q9NP73 1137 aaKnown RBP16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 CNTNAP5Q8WYK1 1306 aa16.18■□□□□ 0.18
SMARCD2-205ENST00000577686 DOCK5Q9H7D0 1870 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 CCDC196A0A1B0GTZ2 297 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 GPR182O15218 404 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 RPS6KA5O75582 802 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 IRS1P35568 1242 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 LTBRP36941 435 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 SREBF1P36956 1147 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 FGD1P98174 961 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 TMEM62Q0P6H9 643 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 NFX1Q12986 1120 aaKnown RBP16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 ADAM15Q13444 863 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 PKN1Q16512 942 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 HERC4Q5GLZ8 1057 aaPredicted RBP16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 ZNF484Q5JVG2 852 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 PDE12Q6L8Q7 609 aaKnown RBP16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 APOA5Q6Q788 366 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 MTHFD1LQ6UB35 978 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 RAB11FIP4Q86YS3 637 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 KLHL23Q8NBE8 558 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 MICAL1Q8TDZ2 1067 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 ATP8B4Q8TF62 1192 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 POF1BQ8WVV4 589 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 LINC01599Q8WXQ3 324 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 NEK1Q96PY6 1258 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 PCYT2Q99447 389 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 CDCA3Q99618 268 aaPredicted RBP16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 AGO4Q9HCK5 861 aaKnown RBP16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 GINS2Q9Y248 185 aa16.17■□□□□ 0.18
SMARCD2-205ENST00000577686 SMCO2A6NFE2 343 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 GOLGA8AA7E2F4 631 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 GOLGA8BA8MQT2 603 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 HOXA2O43364 376 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 TBX10O75333 385 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 ITGB1P05556 798 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 RCAN1P53805 252 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 SETQ01105 290 aaPredicted RBP16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 NECTIN1Q15223 517 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 PDXDC2PQ6P474 469 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 CKAP2LQ8IYA6 745 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 ZNF710Q8N1W2 664 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 SPPL3Q8TCT6 385 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 LRRC2Q9BYS8 371 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 ZNF302Q9NR11 478 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 BARHL2Q9NY43 387 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 CEP131Q9UPN4 1083 aa16.16■□□□□ 0.18
SMARCD2-205ENST00000577686 MEIS1O00470 390 aa16.15■□□□□ 0.18
SMARCD2-205ENST00000577686 ATG7O95352 703 aa16.15■□□□□ 0.18
SMARCD2-205ENST00000577686 HMGB1P09429 215 aaKnown RBP16.15■□□□□ 0.18
SMARCD2-205ENST00000577686 ARP10275 920 aa16.15■□□□□ 0.18
SMARCD2-205ENST00000577686 IBSPP21815 317 aaPredicted RBP16.15■□□□□ 0.18
SMARCD2-205ENST00000577686 KLRC1P26715 233 aa16.15■□□□□ 0.18
SMARCD2-205ENST00000577686 PLA2G4DQ86XP0 818 aa16.15■□□□□ 0.18
SMARCD2-205ENST00000577686 TRAPPC12Q8WVT3 735 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms