RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 NONOQ15233 471 aaKnown RBP eCLIP17.55■□□□□ 0.4
SF3B3-215ENST00000577085 LRCH2Q5VUJ6 765 aa17.55■□□□□ 0.4
SF3B3-215ENST00000577085 TRMT1LQ7Z2T5 733 aaKnown RBP17.55■□□□□ 0.4
SF3B3-215ENST00000577085 KRT25Q7Z3Z0 450 aa17.55■□□□□ 0.4
SF3B3-215ENST00000577085 CCDC60Q8IWA6 550 aaPredicted RBP17.55■□□□□ 0.4
SF3B3-215ENST00000577085 ZBTB10Q96DT7 871 aa17.55■□□□□ 0.4
SF3B3-215ENST00000577085 AIFM3Q96NN9 605 aa17.55■□□□□ 0.4
SF3B3-215ENST00000577085 YME1L1Q96TA2 773 aa17.55■□□□□ 0.4
SF3B3-215ENST00000577085 STK36Q9NRP7 1315 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 CCDC194A0A1B0GVG4 234 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 LCHNA4D1U4 455 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 WDR64B1ANS9 1081 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 CHMP2AO43633 222 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 KLRC1P26715 233 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 NEK4P51957 841 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 ZNF484Q5JVG2 852 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 MTHFD1LQ6UB35 978 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 TSHZ1Q6ZSZ6 1077 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 DAGLBQ8NCG7 672 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 RIT2Q99578 217 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 TEKT3Q9BXF9 490 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 GABBR1Q9UBS5 961 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 MTUS1Q9ULD2 1270 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 KCNJ14Q9UNX9 436 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 CEP131Q9UPN4 1083 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 TRPV2Q9Y5S1 764 aa17.54■□□□□ 0.4
SF3B3-215ENST00000577085 COL1A2P08123 1366 aa17.53■□□□□ 0.4
SF3B3-215ENST00000577085 SMIM35A0A1B0GVV1 85 aa17.53■□□□□ 0.4
SF3B3-215ENST00000577085 RFXAPO00287 272 aa17.53■□□□□ 0.4
SF3B3-215ENST00000577085 MSH4O15457 936 aa17.53■□□□□ 0.4
SF3B3-215ENST00000577085 MGAT3Q09327 533 aa17.53■□□□□ 0.4
SF3B3-215ENST00000577085 LPIN1Q14693 890 aa17.53■□□□□ 0.4
SF3B3-215ENST00000577085 SKIV2LQ15477 1246 aaKnown RBP17.53■□□□□ 0.4
SF3B3-215ENST00000577085 NME8Q8N427 588 aa17.53■□□□□ 0.4
SF3B3-215ENST00000577085 USP38Q8NB14 1042 aa17.53■□□□□ 0.4
SF3B3-215ENST00000577085 BBXQ8WY36 941 aaPredicted RBP17.53■□□□□ 0.4
SF3B3-215ENST00000577085 LENG9Q96B70 501 aa17.53■□□□□ 0.4
SF3B3-215ENST00000577085 FAM167AQ96KS9 214 aa17.53■□□□□ 0.4
SF3B3-215ENST00000577085 TGS1Q96RS0 853 aaKnown RBP17.53■□□□□ 0.4
SF3B3-215ENST00000577085 BRMS1Q9HCU9 246 aa17.53■□□□□ 0.4
SF3B3-215ENST00000577085 ORC3Q9UBD5 711 aaPredicted RBP17.53■□□□□ 0.4
SF3B3-215ENST00000577085 GINS2Q9Y248 185 aa17.53■□□□□ 0.4
SF3B3-215ENST00000577085 SFNP31947 248 aa17.52■□□□□ 0.4
SF3B3-215ENST00000577085 JAK3P52333 1124 aa17.52■□□□□ 0.4
SF3B3-215ENST00000577085 PAK2Q13177 524 aa17.52■□□□□ 0.4
SF3B3-215ENST00000577085 Q4G0T1 1027 aa17.52■□□□□ 0.4
SF3B3-215ENST00000577085 FBXO47Q5MNV8 452 aa17.52■□□□□ 0.4
SF3B3-215ENST00000577085 METTL13Q8N6R0 699 aa17.52■□□□□ 0.4
SF3B3-215ENST00000577085 NECAB1Q8N987 351 aa17.52■□□□□ 0.4
SF3B3-215ENST00000577085 TOP1MTQ969P6 601 aa17.52■□□□□ 0.4
SF3B3-215ENST00000577085 OSBPL7Q9BZF2 842 aa17.52■□□□□ 0.4
SF3B3-215ENST00000577085 DISC1Q9NRI5 854 aa17.52■□□□□ 0.4
SF3B3-215ENST00000577085 MAFBQ9Y5Q3 323 aaPredicted RBP17.52■□□□□ 0.4
SF3B3-215ENST00000577085 UNC80Q8N2C7 3258 aa17.52■□□□□ 0.39
SF3B3-215ENST00000577085 LINC01553A4QN01 128 aa17.51■□□□□ 0.39
SF3B3-215ENST00000577085 MARCH6O60337 910 aa17.51■□□□□ 0.39
SF3B3-215ENST00000577085 ARHGEF15O94989 841 aa17.51■□□□□ 0.39
SF3B3-215ENST00000577085 TDP2O95551 362 aa17.51■□□□□ 0.39
SF3B3-215ENST00000577085 INF2Q27J81 1249 aa17.51■□□□□ 0.39
SF3B3-215ENST00000577085 LETM2Q2VYF4 491 aa17.51■□□□□ 0.39
SF3B3-215ENST00000577085 SLC5A5Q92911 643 aa17.51■□□□□ 0.39
SF3B3-215ENST00000577085 PHF20Q9BVI0 1012 aa17.51■□□□□ 0.39
SF3B3-215ENST00000577085 CELF4Q9BZC1 486 aaKnown RBP17.51■□□□□ 0.39
SF3B3-215ENST00000577085 NRBP2Q9NSY0 501 aa17.51■□□□□ 0.39
SF3B3-215ENST00000577085 DDX25Q9UHL0 483 aaKnown RBP17.51■□□□□ 0.39
SF3B3-215ENST00000577085 SQORQ9Y6N5 450 aa17.51■□□□□ 0.39
SF3B3-215ENST00000577085 CHD9Q3L8U1 2897 aa17.51■□□□□ 0.39
SF3B3-215ENST00000577085 CYP3A7-CYP3A51PA0A087WV96 503 aa17.5■□□□□ 0.39
SF3B3-215ENST00000577085 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.5■□□□□ 0.39
SF3B3-215ENST00000577085 RBAK-RBAKDNI3L0D1 243 aa17.5■□□□□ 0.39
SF3B3-215ENST00000577085 CYP3A7P24462 503 aa17.5■□□□□ 0.39
SF3B3-215ENST00000577085 CD52P31358 61 aa17.5■□□□□ 0.39
SF3B3-215ENST00000577085 MKRN4PQ13434 485 aaPredicted RBP17.5■□□□□ 0.39
SF3B3-215ENST00000577085 TRIM29Q14134 588 aa17.5■□□□□ 0.39
SF3B3-215ENST00000577085 ME3Q16798 604 aa17.5■□□□□ 0.39
SF3B3-215ENST00000577085 MOXD1Q6UVY6 613 aa17.5■□□□□ 0.39
SF3B3-215ENST00000577085 MIER3Q7Z3K6 550 aa17.5■□□□□ 0.39
SF3B3-215ENST00000577085 IL27Q8NEV9 243 aa17.5■□□□□ 0.39
SF3B3-215ENST00000577085 GTF3C6Q969F1 213 aa17.5■□□□□ 0.39
SF3B3-215ENST00000577085 NAP1L4Q99733 375 aaKnown RBP17.5■□□□□ 0.39
SF3B3-215ENST00000577085 FTHL17Q9BXU8 183 aa17.5■□□□□ 0.39
SF3B3-215ENST00000577085 THEGQ9P2T0 379 aa17.5■□□□□ 0.39
SF3B3-215ENST00000577085 PTPRSQ13332 1948 aa17.49■□□□□ 0.39
SF3B3-215ENST00000577085 EPOPA6NHQ4 379 aa17.49■□□□□ 0.39
SF3B3-215ENST00000577085 M0R2N6 131 aa17.49■□□□□ 0.39
SF3B3-215ENST00000577085 OATP04181 439 aa17.49■□□□□ 0.39
SF3B3-215ENST00000577085 TMOD1P28289 359 aa17.49■□□□□ 0.39
SF3B3-215ENST00000577085 ERVK-21P61565 698 aa17.49■□□□□ 0.39
SF3B3-215ENST00000577085 HTRA4P83105 476 aaPredicted RBP17.49■□□□□ 0.39
SF3B3-215ENST00000577085 GRB10Q13322 594 aa17.49■□□□□ 0.39
SF3B3-215ENST00000577085 ODR4Q5SWX8 454 aa17.49■□□□□ 0.39
SF3B3-215ENST00000577085 PIK3AP1Q6ZUJ8 805 aa17.49■□□□□ 0.39
SF3B3-215ENST00000577085 NEK8Q86SG6 692 aa17.49■□□□□ 0.39
SF3B3-215ENST00000577085 RDM1Q8NG50 284 aa17.49■□□□□ 0.39
SF3B3-215ENST00000577085 GDPD5Q8WTR4 605 aa17.49■□□□□ 0.39
SF3B3-215ENST00000577085 SYMPKQ92797 1274 aaKnown RBP17.49■□□□□ 0.39
SF3B3-215ENST00000577085 GJA10Q969M2 543 aa17.49■□□□□ 0.39
SF3B3-215ENST00000577085 IL17RAQ96F46 866 aa17.49■□□□□ 0.39
SF3B3-215ENST00000577085 UNC45AQ9H3U1 944 aa17.49■□□□□ 0.39
SF3B3-215ENST00000577085 MTCH2Q9Y6C9 303 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms