RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-223	ENST00000576932	UPP2	O95045	317 aa		10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	TOP1	P11387	765 aa	Known RBP	10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	ATF7	P17544	494 aa	Predicted RBP	10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	NDUFV1	P49821	464 aa		10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	VCP	P55072	806 aa	Known RBP	10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	ZNF200	P98182	395 aa	Predicted RBP	10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	NAALADL2	Q58DX5	795 aa		10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	KCNV1	Q6PIU1	500 aa		10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	CHST3	Q7LGC8	479 aa		10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	EFHB	Q8N7U6	833 aa		10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	CHMP4C	Q96CF2	233 aa		10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	PHF7	Q9BWX1	381 aa	Predicted RBP	10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	C1QTNF2	Q9BXJ5	285 aa		10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	LRRCC1	Q9C099	1032 aa		10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	ALG2	Q9H553	416 aa		10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	RC3H2	Q9HBD1	1191 aa	Known RBP	10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	TCP11L1	Q9NUJ3	509 aa		10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	ANAPC4	Q9UJX5	808 aa		10.8	□□□□□ -0.68
TOM1L1-223	ENST00000576932	FSD2	A1L4K1	749 aa		10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	C17orf102	A2RUQ5	167 aa		10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	PRR23A	A6NEV1	266 aa		10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	CCER2	I3L3R5	266 aa		10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	ORC4	O43929	436 aa		10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	EIF3J	O75822	258 aa	Known RBP	10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	FGR	P09769	529 aa		10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	ZNF286B	P0CG31	522 aa		10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	SNHG28	P0DPA3	235 aa		10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	PDHB	P11177	359 aa		10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	RRP1	P56182	461 aa	Known RBP	10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	VASH1	Q7L8A9	365 aa	Predicted RBP	10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	ASCL5	Q7RTU5	278 aa		10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	SYTL5	Q8TDW5	730 aa	Predicted RBP	10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	GPATCH3	Q96I76	525 aa		10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	CLEC1B	Q9P126	229 aa		10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	PLAGL2	Q9UPG8	496 aa		10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	MAP4K5	Q9Y4K4	846 aa		10.79	□□□□□ -0.68
TOM1L1-223	ENST00000576932	POM121C	A8CG34	1229 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932		H0Y858	1186 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	LINC01565	O15544	149 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	ID4	P47928	161 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	ZNF543	Q08ER8	600 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	CAMK1	Q14012	370 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	PTPN21	Q16825	1174 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	FAM26D	Q5JW98	314 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	GPATCH4	Q5T3I0	446 aa	Known RBP	10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	MCTP2	Q6DN12	878 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	MCF2L2	Q86YR7	1114 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	ATP6V0A1	Q93050	837 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	ZNF689	Q96CS4	500 aa	Predicted RBP	10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	RMDN3	Q96TC7	470 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	TMEM47	Q9BQJ4	181 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	C16orf70	Q9BSU1	422 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	BCL11A	Q9H165	835 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	CHMP4B	Q9H444	224 aa	Known RBP	10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	IGFLR1	Q9H665	355 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	TLR9	Q9NR96	1032 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	ZBTB40	Q9NUA8	1239 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	MTMR7	Q9Y216	660 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	USP15	Q9Y4E8	981 aa	Predicted RBP	10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	MRVI1	Q9Y6F6	885 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	ABCB11	O95342	1321 aa		10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	FRMPD2	Q68DX3	1309 aa	Predicted RBP	10.78	□□□□□ -0.68
TOM1L1-223	ENST00000576932	RANBP6	O60518	1105 aa	Known RBP	10.77	□□□□□ -0.69
TOM1L1-223	ENST00000576932	TGFB3	P10600	412 aa		10.77	□□□□□ -0.69
TOM1L1-223	ENST00000576932	GNAT1	P11488	350 aa		10.77	□□□□□ -0.69
TOM1L1-223	ENST00000576932	SKOR1	P84550	965 aa		10.77	□□□□□ -0.69
TOM1L1-223	ENST00000576932	DHX9	Q08211	1270 aa	Known RBP	10.77	□□□□□ -0.69
TOM1L1-223	ENST00000576932	ARID5B	Q14865	1188 aa		10.77	□□□□□ -0.69
TOM1L1-223	ENST00000576932	CELF3	Q5SZQ8	465 aa	Known RBP	10.77	□□□□□ -0.69
TOM1L1-223	ENST00000576932	SUSD6	Q92537	303 aa		10.77	□□□□□ -0.69
TOM1L1-223	ENST00000576932	RIPOR3	Q96MK2	946 aa		10.77	□□□□□ -0.69
TOM1L1-223	ENST00000576932	TTC14	Q96N46	770 aa		10.77	□□□□□ -0.69
TOM1L1-223	ENST00000576932	TAAR1	Q96RJ0	339 aa		10.77	□□□□□ -0.69
TOM1L1-223	ENST00000576932	INCENP	Q9NQS7	918 aa		10.77	□□□□□ -0.69
TOM1L1-223	ENST00000576932	COL20A1	Q9P218	1284 aa		10.77	□□□□□ -0.69
TOM1L1-223	ENST00000576932	DDX19B	Q9UMR2	479 aa		10.77	□□□□□ -0.69
TOM1L1-223	ENST00000576932	CACNA1B	Q00975	2339 aa		10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	TTC3	P53804	2025 aa		10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932		H3BRB1	525 aa		10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	TREH	O43280	583 aa		10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	LZTS3	O60299	673 aa	Predicted RBP	10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	GHRHR	Q02643	423 aa		10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	FOXC1	Q12948	553 aa		10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	BTG3	Q14201	252 aa	Predicted RBP	10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	HSDL1	Q3SXM5	330 aa		10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	USH1G	Q495M9	461 aa		10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	ZMYM1	Q5SVZ6	1142 aa		10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	ARHGEF16	Q5VV41	709 aa		10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	PANK1	Q8TE04	598 aa		10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	SPATA33	Q96N06	139 aa		10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	TUT1	Q9H6E5	874 aa	Known RBP	10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	MAP3K20	Q9NYL2	800 aa	Known RBP	10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	MYH7B	A7E2Y1	1941 aa		10.76	□□□□□ -0.69
TOM1L1-223	ENST00000576932	FOXP2	O15409	715 aa		10.75	□□□□□ -0.69
TOM1L1-223	ENST00000576932	DGKI	O75912	1065 aa		10.75	□□□□□ -0.69
TOM1L1-223	ENST00000576932	GLP2R	O95838	553 aa		10.75	□□□□□ -0.69
TOM1L1-223	ENST00000576932	NR3C2	P08235	984 aa		10.75	□□□□□ -0.69
TOM1L1-223	ENST00000576932	SMIM10L2A	P0DMW4	78 aa		10.75	□□□□□ -0.69
TOM1L1-223	ENST00000576932	SMIM10L2B	P0DMW5	78 aa		10.75	□□□□□ -0.69

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