RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 SP8Q8IXZ3 490 aa7.61□□□□□ -1.19
NUP88-213ENST00000576862 KIAA1958Q8N8K9 716 aa7.61□□□□□ -1.19
NUP88-213ENST00000576862 TXNDC5Q8NBS9 432 aaKnown RBP7.61□□□□□ -1.19
NUP88-213ENST00000576862 FEZF2Q8TBJ5 459 aa7.61□□□□□ -1.19
NUP88-213ENST00000576862 FOXRED1Q96CU9 486 aaPredicted RBP7.61□□□□□ -1.19
NUP88-213ENST00000576862 YTHDC1Q96MU7 727 aaKnown RBP7.61□□□□□ -1.19
NUP88-213ENST00000576862 GBP4Q96PP9 640 aa7.61□□□□□ -1.19
NUP88-213ENST00000576862 XYLT2Q9H1B5 865 aa7.61□□□□□ -1.19
NUP88-213ENST00000576862 SLKQ9H2G2 1235 aaPredicted RBP7.61□□□□□ -1.19
NUP88-213ENST00000576862 INCENPQ9NQS7 918 aa7.61□□□□□ -1.19
NUP88-213ENST00000576862 OXSMQ9NWU1 459 aa7.61□□□□□ -1.19
NUP88-213ENST00000576862 UCKL1Q9NWZ5 548 aa7.61□□□□□ -1.19
NUP88-213ENST00000576862 MAPRE3Q9UPY8 281 aa7.61□□□□□ -1.19
NUP88-213ENST00000576862 GOLGA6L22H0YM25 854 aa7.6□□□□□ -1.19
NUP88-213ENST00000576862 H7C1D1 291 aa7.6□□□□□ -1.19
NUP88-213ENST00000576862 NOBOXO60393 691 aa7.6□□□□□ -1.19
NUP88-213ENST00000576862 KLHL18O94889 574 aa7.6□□□□□ -1.19
NUP88-213ENST00000576862 MASP1P48740 699 aa7.6□□□□□ -1.19
NUP88-213ENST00000576862 FAM26FQ5R3K3 315 aa7.6□□□□□ -1.19
NUP88-213ENST00000576862 TRMT10BQ6PF06 316 aaKnown RBP7.6□□□□□ -1.19
NUP88-213ENST00000576862 LRSAM1Q6UWE0 723 aa7.6□□□□□ -1.19
NUP88-213ENST00000576862 RTN4RL1Q86UN2 441 aaPredicted RBP7.6□□□□□ -1.19
NUP88-213ENST00000576862 CHTF18Q8WVB6 975 aa7.6□□□□□ -1.19
NUP88-213ENST00000576862 PARD6AQ9NPB6 346 aa7.6□□□□□ -1.19
NUP88-213ENST00000576862 GALNT8Q9NY28 637 aa7.6□□□□□ -1.19
NUP88-213ENST00000576862 ASB1Q9Y576 335 aa7.6□□□□□ -1.19
NUP88-213ENST00000576862 PRAMEF22A3QJZ6 481 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 OTOL1A6NHN0 477 aaPredicted RBP7.59□□□□□ -1.19
NUP88-213ENST00000576862 FBXO21O94952 628 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 CHGBP05060 677 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 SLC9A1P19634 815 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 PTX3P26022 381 aaPredicted RBP7.59□□□□□ -1.19
NUP88-213ENST00000576862 FNTBP49356 437 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 IL13RA1P78552 427 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 RGL3Q3MIN7 710 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 FBLN7Q53RD9 439 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 TAF7LQ5H9L4 462 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 NT5DC1Q5TFE4 455 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 SMC1BQ8NDV3 1235 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 LEO1Q8WVC0 666 aaPredicted RBP7.59□□□□□ -1.19
NUP88-213ENST00000576862 C16orf92Q96LL3 132 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 ELF4Q99607 663 aaPredicted RBP7.59□□□□□ -1.19
NUP88-213ENST00000576862 ZCCHC4Q9H5U6 513 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 L2HGDHQ9H9P8 463 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 ACSS2Q9NR19 701 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 ZKSCAN5Q9Y2L8 839 aa7.59□□□□□ -1.19
NUP88-213ENST00000576862 GAS7O60861 476 aa7.58□□□□□ -1.2
NUP88-213ENST00000576862 INHBBP09529 407 aa7.58□□□□□ -1.2
NUP88-213ENST00000576862 STILQ15468 1287 aa7.58□□□□□ -1.2
NUP88-213ENST00000576862 ZNF174Q15697 407 aa7.58□□□□□ -1.2
NUP88-213ENST00000576862 HIPK4Q8NE63 616 aa7.58□□□□□ -1.2
NUP88-213ENST00000576862 NUDT10Q8NFP7 164 aa7.58□□□□□ -1.2
NUP88-213ENST00000576862 MBD6Q96DN6 1003 aa7.58□□□□□ -1.2
NUP88-213ENST00000576862 NUDT11Q96G61 164 aa7.58□□□□□ -1.2
NUP88-213ENST00000576862 PCIF1Q9H4Z3 704 aa7.58□□□□□ -1.2
NUP88-213ENST00000576862 IFT57Q9NWB7 429 aa7.58□□□□□ -1.2
NUP88-213ENST00000576862 THG1LQ9NWX6 298 aaKnown RBP7.58□□□□□ -1.2
NUP88-213ENST00000576862 SPO11Q9Y5K1 396 aa7.58□□□□□ -1.2
NUP88-213ENST00000576862 TGM5O43548 720 aa7.57□□□□□ -1.2
NUP88-213ENST00000576862 SASH1O94885 1247 aa7.57□□□□□ -1.2
NUP88-213ENST00000576862 STAT3P40763 770 aa7.57□□□□□ -1.2
NUP88-213ENST00000576862 ESRP1Q6NXG1 681 aaKnown RBP7.57□□□□□ -1.2
NUP88-213ENST00000576862 ERCC4Q92889 916 aaPredicted RBP7.57□□□□□ -1.2
NUP88-213ENST00000576862 BTBD2Q9BX70 525 aa7.57□□□□□ -1.2
NUP88-213ENST00000576862 C9orf118A6NHY6 69 aa7.56□□□□□ -1.2
NUP88-213ENST00000576862 CLSTN1O94985 981 aa7.56□□□□□ -1.2
NUP88-213ENST00000576862 CYP17A1P05093 508 aa7.56□□□□□ -1.2
NUP88-213ENST00000576862 ECE1P42892 770 aa7.56□□□□□ -1.2
NUP88-213ENST00000576862 SCNN1BP51168 640 aa7.56□□□□□ -1.2
NUP88-213ENST00000576862 ALDH6A1Q02252 535 aaKnown RBP7.56□□□□□ -1.2
NUP88-213ENST00000576862 KANK2Q63ZY3 851 aa7.56□□□□□ -1.2
NUP88-213ENST00000576862 TTLL10Q6ZVT0 673 aa7.56□□□□□ -1.2
NUP88-213ENST00000576862 ZDHHC14Q8IZN3 488 aa7.56□□□□□ -1.2
NUP88-213ENST00000576862 UBR7Q8N806 425 aa7.56□□□□□ -1.2
NUP88-213ENST00000576862 KRTAP9-9Q9BYP9 154 aa7.56□□□□□ -1.2
NUP88-213ENST00000576862 KRTAP9-4Q9BYQ2 154 aa7.56□□□□□ -1.2
NUP88-213ENST00000576862 TMEM168Q9H0V1 697 aa7.56□□□□□ -1.2
NUP88-213ENST00000576862 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.56□□□□□ -1.2
NUP88-213ENST00000576862 FTSJ1Q9UET6 329 aa7.56□□□□□ -1.2
NUP88-213ENST00000576862 MROH6A6NGR9 719 aa7.55□□□□□ -1.2
NUP88-213ENST00000576862 H0Y858 1186 aa7.55□□□□□ -1.2
NUP88-213ENST00000576862 HOXA5P20719 270 aa7.55□□□□□ -1.2
NUP88-213ENST00000576862 ADCYAP1R1P41586 468 aa7.55□□□□□ -1.2
NUP88-213ENST00000576862 GJA9P57773 515 aa7.55□□□□□ -1.2
NUP88-213ENST00000576862 DPP8Q6V1X1 898 aaPredicted RBP7.55□□□□□ -1.2
NUP88-213ENST00000576862 STRA8Q7Z7C7 330 aa7.55□□□□□ -1.2
NUP88-213ENST00000576862 EFHBQ8N7U6 833 aa7.55□□□□□ -1.2
NUP88-213ENST00000576862 OR2W6PQ8NHA6 318 aa7.55□□□□□ -1.2
NUP88-213ENST00000576862 GPR101Q96P66 508 aaPredicted RBP7.55□□□□□ -1.2
NUP88-213ENST00000576862 OR10A5Q9H207 317 aa7.55□□□□□ -1.2
NUP88-213ENST00000576862 ZMAT4Q9H898 229 aa7.55□□□□□ -1.2
NUP88-213ENST00000576862 CAAP1Q9H8G2 361 aa7.55□□□□□ -1.2
NUP88-213ENST00000576862 SPTLC3Q9NUV7 552 aa7.55□□□□□ -1.2
NUP88-213ENST00000576862 DUSP10Q9Y6W6 482 aa7.55□□□□□ -1.2
NUP88-213ENST00000576862 A0A0G2JLL6 359 aaPredicted RBP7.54□□□□□ -1.2
NUP88-213ENST00000576862 PRLP01236 227 aa7.54□□□□□ -1.2
NUP88-213ENST00000576862 CYP1A1P04798 512 aaPredicted RBP7.54□□□□□ -1.2
NUP88-213ENST00000576862 VIL1P09327 827 aaKnown RBP7.54□□□□□ -1.2
NUP88-213ENST00000576862 BPIP17213 487 aa7.54□□□□□ -1.2
NUP88-213ENST00000576862 LSSP48449 732 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms