RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 BAIAP3O94812 1187 aa26.5■■□□□ 1.83
SNF8-217ENST00000576353 CD2BP2O95400 341 aaKnown RBP26.5■■□□□ 1.83
SNF8-217ENST00000576353 ZNF484Q5JVG2 852 aa26.5■■□□□ 1.83
SNF8-217ENST00000576353 FAM109BQ6ICB4 259 aaPredicted RBP26.5■■□□□ 1.83
SNF8-217ENST00000576353 RUFY4Q6ZNE9 571 aa26.5■■□□□ 1.83
SNF8-217ENST00000576353 MIER3Q7Z3K6 550 aa26.5■■□□□ 1.83
SNF8-217ENST00000576353 FAM167AQ96KS9 214 aa26.5■■□□□ 1.83
SNF8-217ENST00000576353 FOXP1Q9H334 677 aaPredicted RBP26.5■■□□□ 1.83
SNF8-217ENST00000576353 COL1A2P08123 1366 aa26.49■■□□□ 1.83
SNF8-217ENST00000576353 BAG4O95429 457 aaKnown RBP26.49■■□□□ 1.83
SNF8-217ENST00000576353 ATP4AP20648 1035 aa26.49■■□□□ 1.83
SNF8-217ENST00000576353 MBTPS1Q14703 1052 aa26.49■■□□□ 1.83
SNF8-217ENST00000576353 FAM26DQ5JW98 314 aa26.49■■□□□ 1.83
SNF8-217ENST00000576353 CNKSR3Q6P9H4 555 aa26.49■■□□□ 1.83
SNF8-217ENST00000576353 B3GNT9Q6UX72 402 aa26.49■■□□□ 1.83
SNF8-217ENST00000576353 PCDHA2Q9Y5H9 948 aa26.49■■□□□ 1.83
SNF8-217ENST00000576353 IGSF9BQ9UPX0 1349 aa26.48■■□□□ 1.83
SNF8-217ENST00000576353 CTSHP09668 335 aa26.48■■□□□ 1.83
SNF8-217ENST00000576353 MTHFD1LQ6UB35 978 aa26.48■■□□□ 1.83
SNF8-217ENST00000576353 SLFN12Q8IYM2 578 aa26.48■■□□□ 1.83
SNF8-217ENST00000576353 TRAPPC12Q8WVT3 735 aa26.48■■□□□ 1.83
SNF8-217ENST00000576353 NRBP2Q9NSY0 501 aa26.48■■□□□ 1.83
SNF8-217ENST00000576353 CEP131Q9UPN4 1083 aa26.48■■□□□ 1.83
SNF8-217ENST00000576353 KLRC1P26715 233 aa26.47■■□□□ 1.83
SNF8-217ENST00000576353 PPP2R5CQ13362 524 aa26.47■■□□□ 1.83
SNF8-217ENST00000576353 GNL2Q13823 731 aaKnown RBP26.47■■□□□ 1.83
SNF8-217ENST00000576353 POTEDQ86YR6 584 aa26.47■■□□□ 1.83
SNF8-217ENST00000576353 DEFB123Q8N688 67 aa26.47■■□□□ 1.83
SNF8-217ENST00000576353 DNAJB3Q8WWF6 145 aa26.47■■□□□ 1.83
SNF8-217ENST00000576353 HAS1Q92839 578 aa26.47■■□□□ 1.83
SNF8-217ENST00000576353 TRIP12Q14669 1992 aaPredicted RBP26.46■■□□□ 1.83
SNF8-217ENST00000576353 ABHD14A-ACY1A0A1B0GW23 586 aa26.46■■□□□ 1.83
SNF8-217ENST00000576353 EFCAB14O75071 495 aa26.46■■□□□ 1.83
SNF8-217ENST00000576353 ATP2A2P16615 1042 aaKnown RBP26.46■■□□□ 1.83
SNF8-217ENST00000576353 IKBKEQ14164 716 aa26.46■■□□□ 1.83
SNF8-217ENST00000576353 ZNF697Q5TEC3 545 aa26.46■■□□□ 1.83
SNF8-217ENST00000576353 PHOSPHO2Q8TCD6 241 aa26.46■■□□□ 1.83
SNF8-217ENST00000576353 TANC1Q9C0D5 1861 aa26.46■■□□□ 1.83
SNF8-217ENST00000576353 SMIM35A0A1B0GVV1 85 aa26.45■■□□□ 1.82
SNF8-217ENST00000576353 GRXCR1A8MXD5 290 aa26.45■■□□□ 1.82
SNF8-217ENST00000576353 CHRNA1P02708 482 aa26.45■■□□□ 1.82
SNF8-217ENST00000576353 OATP04181 439 aa26.45■■□□□ 1.82
SNF8-217ENST00000576353 KCNJ6P48051 423 aa26.45■■□□□ 1.82
SNF8-217ENST00000576353 RAB30Q15771 203 aa26.45■■□□□ 1.82
SNF8-217ENST00000576353 IER5Q5VY09 327 aa26.45■■□□□ 1.82
SNF8-217ENST00000576353 TRMT1LQ7Z2T5 733 aaKnown RBP26.45■■□□□ 1.82
SNF8-217ENST00000576353 NME8Q8N427 588 aa26.45■■□□□ 1.82
SNF8-217ENST00000576353 ZBTB10Q96DT7 871 aa26.45■■□□□ 1.82
SNF8-217ENST00000576353 SLC9A7Q96T83 725 aa26.45■■□□□ 1.82
SNF8-217ENST00000576353 FAM49AQ9H0Q0 323 aaPredicted RBP26.45■■□□□ 1.82
SNF8-217ENST00000576353 VAV3Q9UKW4 847 aa26.45■■□□□ 1.82
SNF8-217ENST00000576353 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.45■■□□□ 1.82
SNF8-217ENST00000576353 ZBTB42B2RXF5 422 aa26.44■■□□□ 1.82
SNF8-217ENST00000576353 ZNF862O60290 1169 aa26.44■■□□□ 1.82
SNF8-217ENST00000576353 DNAJB2P25686 324 aa26.44■■□□□ 1.82
SNF8-217ENST00000576353 MRPS6P82932 125 aaKnown RBP26.44■■□□□ 1.82
SNF8-217ENST00000576353 PRKCEQ02156 737 aa26.44■■□□□ 1.82
SNF8-217ENST00000576353 CALCRLQ16602 461 aa26.44■■□□□ 1.82
SNF8-217ENST00000576353 PLEKHG4Q58EX7 1191 aa26.44■■□□□ 1.82
SNF8-217ENST00000576353 SEPT8Q92599 483 aa26.44■■□□□ 1.82
SNF8-217ENST00000576353 MSRAQ9UJ68 235 aa26.44■■□□□ 1.82
SNF8-217ENST00000576353 SCN5AQ14524 2016 aa26.43■■□□□ 1.82
SNF8-217ENST00000576353 KAT6AQ92794 2004 aa26.43■■□□□ 1.82
SNF8-217ENST00000576353 TMEM265A0A087WTH1 108 aa26.43■■□□□ 1.82
SNF8-217ENST00000576353 M0QZ92 97 aa26.43■■□□□ 1.82
SNF8-217ENST00000576353 NEMFO60524 1076 aa26.43■■□□□ 1.82
SNF8-217ENST00000576353 UGCGQ16739 394 aa26.43■■□□□ 1.82
SNF8-217ENST00000576353 Q7L0L9 218 aa26.43■■□□□ 1.82
SNF8-217ENST00000576353 NOSTRINQ8IVI9 506 aa26.43■■□□□ 1.82
SNF8-217ENST00000576353 DBF4BQ8NFT6 615 aa26.43■■□□□ 1.82
SNF8-217ENST00000576353 PBX4Q9BYU1 374 aa26.43■■□□□ 1.82
SNF8-217ENST00000576353 SMC3Q9UQE7 1217 aa26.43■■□□□ 1.82
SNF8-217ENST00000576353 MAGEB2O15479 319 aa26.42■■□□□ 1.82
SNF8-217ENST00000576353 DKC1O60832 514 aaKnown RBP eCLIP26.42■■□□□ 1.82
SNF8-217ENST00000576353 ATP2B1P20020 1258 aa26.42■■□□□ 1.82
SNF8-217ENST00000576353 PSMC5P62195 406 aa26.42■■□□□ 1.82
SNF8-217ENST00000576353 MGAT3Q09327 533 aa26.42■■□□□ 1.82
SNF8-217ENST00000576353 XKR3Q5GH77 459 aa26.42■■□□□ 1.82
SNF8-217ENST00000576353 PCDHA12Q9UN75 941 aa26.42■■□□□ 1.82
SNF8-217ENST00000576353 CDY2AQ9Y6F7 541 aa26.42■■□□□ 1.82
SNF8-217ENST00000576353 EML1O00423 815 aa26.41■■□□□ 1.82
SNF8-217ENST00000576353 C22orf31O95567 290 aa26.41■■□□□ 1.82
SNF8-217ENST00000576353 GJB2P29033 226 aa26.41■■□□□ 1.82
SNF8-217ENST00000576353 WDR5P61964 334 aaKnown RBP26.41■■□□□ 1.82
SNF8-217ENST00000576353 ORC2Q13416 577 aaPredicted RBP26.41■■□□□ 1.82
SNF8-217ENST00000576353 APBB2Q92870 758 aa26.41■■□□□ 1.82
SNF8-217ENST00000576353 TIFAQ96CG3 184 aa26.41■■□□□ 1.82
SNF8-217ENST00000576353 NOL7Q9UMY1 257 aaKnown RBP26.41■■□□□ 1.82
SNF8-217ENST00000576353 U2AF2P26368 475 aaKnown RBP eCLIP26.4■■□□□ 1.828e-7■□□□□ 10.3
SNF8-217ENST00000576353 MCM7P33993 719 aa26.4■■□□□ 1.82
SNF8-217ENST00000576353 PBX2P40425 430 aa26.4■■□□□ 1.82
SNF8-217ENST00000576353 QARSP47897 775 aaKnown RBP26.4■■□□□ 1.82
SNF8-217ENST00000576353 TRAPPC10P48553 1259 aa26.4■■□□□ 1.82
SNF8-217ENST00000576353 EPHA7Q15375 998 aa26.4■■□□□ 1.82
SNF8-217ENST00000576353 TCTN1Q2MV58 587 aa26.4■■□□□ 1.82
SNF8-217ENST00000576353 KIAA0319LQ8IZA0 1049 aa26.4■■□□□ 1.82
SNF8-217ENST00000576353 BANK1Q8NDB2 785 aa26.4■■□□□ 1.82
SNF8-217ENST00000576353 NIFKQ9BYG3 293 aaKnown RBP26.4■■□□□ 1.82
SNF8-217ENST00000576353 SEMA6BQ9H3T3 888 aa26.4■■□□□ 1.82
SNF8-217ENST00000576353 MTMR10Q9NXD2 777 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms