RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 ATP11BQ9Y2G3 1177 aa15.68■□□□□ 0.1
RPAIN-217ENST00000575711 SRPRBQ9Y5M8 271 aaKnown RBP15.68■□□□□ 0.1
RPAIN-217ENST00000575711 NRCAMQ92823 1304 aa15.68■□□□□ 0.1
RPAIN-217ENST00000575711 SCN10AQ9Y5Y9 1956 aa15.67■□□□□ 0.1
RPAIN-217ENST00000575711 C17orf102A2RUQ5 167 aa15.67■□□□□ 0.1
RPAIN-217ENST00000575711 TLR3O15455 904 aaKnown RBP15.67■□□□□ 0.1
RPAIN-217ENST00000575711 ZNF862O60290 1169 aa15.67■□□□□ 0.1
RPAIN-217ENST00000575711 PQBP1O60828 265 aaKnown RBP15.67■□□□□ 0.1
RPAIN-217ENST00000575711 SLITRK3O94933 977 aa15.67■□□□□ 0.1
RPAIN-217ENST00000575711 OATP04181 439 aa15.67■□□□□ 0.1
RPAIN-217ENST00000575711 GNAT1P11488 350 aa15.67■□□□□ 0.1
RPAIN-217ENST00000575711 ATP4AP20648 1035 aa15.67■□□□□ 0.1
RPAIN-217ENST00000575711 PPFIA1Q13136 1202 aa15.67■□□□□ 0.1
RPAIN-217ENST00000575711 KRT79Q5XKE5 535 aa15.67■□□□□ 0.1
RPAIN-217ENST00000575711 C4orf19Q8IY42 314 aa15.67■□□□□ 0.1
RPAIN-217ENST00000575711 SNX29Q8TEQ0 813 aa15.67■□□□□ 0.1
RPAIN-217ENST00000575711 POLR3CQ9BUI4 534 aaPredicted RBP15.67■□□□□ 0.1
RPAIN-217ENST00000575711 NRBP2Q9NSY0 501 aa15.67■□□□□ 0.1
RPAIN-217ENST00000575711 FBXO2Q9UK22 296 aaPredicted RBP15.67■□□□□ 0.1
RPAIN-217ENST00000575711 MYH15Q9Y2K3 1946 aa15.66■□□□□ 0.1
RPAIN-217ENST00000575711 PP2D1A8MPX8 630 aa15.66■□□□□ 0.1
RPAIN-217ENST00000575711 DCDC2CA8MYV0 355 aa15.66■□□□□ 0.1
RPAIN-217ENST00000575711 INSRRP14616 1297 aa15.66■□□□□ 0.1
RPAIN-217ENST00000575711 RPA1P27694 616 aa15.66■□□□□ 0.1
RPAIN-217ENST00000575711 CCT6AP40227 531 aaKnown RBP15.66■□□□□ 0.1
RPAIN-217ENST00000575711 GRIN1Q05586 938 aa15.66■□□□□ 0.1
RPAIN-217ENST00000575711 GRIK4Q16099 956 aa15.66■□□□□ 0.1
RPAIN-217ENST00000575711 XKR3Q5GH77 459 aa15.66■□□□□ 0.1
RPAIN-217ENST00000575711 ANKRD33Q7Z3H0 272 aa15.66■□□□□ 0.1
RPAIN-217ENST00000575711 CATSPER3Q86XQ3 398 aa15.66■□□□□ 0.1
RPAIN-217ENST00000575711 FAM126BQ8IXS8 530 aa15.66■□□□□ 0.1
RPAIN-217ENST00000575711 SPATA32Q96LK8 384 aa15.66■□□□□ 0.1
RPAIN-217ENST00000575711 TOX2Q96NM4 488 aa15.66■□□□□ 0.1
RPAIN-217ENST00000575711 SCAND2PQ9GZW5 306 aaPredicted RBP15.66■□□□□ 0.1
RPAIN-217ENST00000575711 SETD4Q9NVD3 440 aa15.66■□□□□ 0.1
RPAIN-217ENST00000575711 SEPT9Q9UHD8 586 aaPredicted RBP15.66■□□□□ 0.1
RPAIN-217ENST00000575711 NOD1Q9Y239 953 aa15.66■□□□□ 0.1
RPAIN-217ENST00000575711 COL1A2P08123 1366 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 RRN3P2A6NIE6 340 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 DDX11L8A8MPP1 907 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 B4GALT4O60513 344 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 MED24O75448 989 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 SPATA31C1P0DKV0 1188 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 MUTP22033 750 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 CDC25AP30304 524 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 YWHABP31946 246 aaKnown RBP15.65■□□□□ 0.1
RPAIN-217ENST00000575711 UBA7P41226 1012 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 RGS19P49795 217 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 IGBP1P78318 339 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 TLE2Q04725 743 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 PTGISQ16647 500 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 ZNF484Q5JVG2 852 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 GDF6Q6KF10 455 aaPredicted RBP15.65■□□□□ 0.1
RPAIN-217ENST00000575711 OTUD6AQ7L8S5 288 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 LMBR1Q8WVP7 490 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 CHAMP1Q96JM3 812 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 CLIC6Q96NY7 704 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 CSRNP2Q9H175 543 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 WRAP73Q9P2S5 460 aaPredicted RBP15.65■□□□□ 0.1
RPAIN-217ENST00000575711 RCOR1Q9UKL0 485 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 KDM3AQ9Y4C1 1321 aa15.65■□□□□ 0.1
RPAIN-217ENST00000575711 SLC26A4O43511 780 aa15.64■□□□□ 0.09
RPAIN-217ENST00000575711 LYPLA2O95372 231 aa15.64■□□□□ 0.09
RPAIN-217ENST00000575711 HOXC8P31273 242 aa15.64■□□□□ 0.09
RPAIN-217ENST00000575711 TXLNAP40222 546 aa15.64■□□□□ 0.09
RPAIN-217ENST00000575711 ME1P48163 572 aa15.64■□□□□ 0.09
RPAIN-217ENST00000575711 ZRSR1Q15695 479 aaKnown RBP15.64■□□□□ 0.09
RPAIN-217ENST00000575711 CABP7Q86V35 215 aa15.64■□□□□ 0.09
RPAIN-217ENST00000575711 RASSF8Q8NHQ8 419 aa15.64■□□□□ 0.09
RPAIN-217ENST00000575711 LEO1Q8WVC0 666 aaPredicted RBP15.64■□□□□ 0.09
RPAIN-217ENST00000575711 DPF3Q92784 378 aa15.64■□□□□ 0.09
RPAIN-217ENST00000575711 CDK5RAP3Q96JB5 506 aa15.64■□□□□ 0.09
RPAIN-217ENST00000575711 NIFKQ9BYG3 293 aaKnown RBP15.64■□□□□ 0.09
RPAIN-217ENST00000575711 TRPV6Q9H1D0 765 aa15.64■□□□□ 0.09
RPAIN-217ENST00000575711 TRMT13Q9NUP7 481 aaKnown RBP15.64■□□□□ 0.09
RPAIN-217ENST00000575711 TUBE1Q9UJT0 475 aa15.64■□□□□ 0.09
RPAIN-217ENST00000575711 EVI5O60447 810 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 CUTAO60888 179 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 STBD1O95210 358 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 CD4P01730 458 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 CLTBP09497 229 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 ZNF200P98182 395 aaPredicted RBP15.63■□□□□ 0.09
RPAIN-217ENST00000575711 HIC1Q14526 733 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 MTERF2Q49AM1 385 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 SPECC1Q5M775 1068 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 POTEGQ6S5H5 508 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 ANO5Q75V66 913 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 C7orf61Q8IZ16 206 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 ZNF579Q8NAF0 562 aaKnown RBP15.63■□□□□ 0.09
RPAIN-217ENST00000575711 TRAPPC12Q8WVT3 735 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 CALML4Q96GE6 196 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 CCDC43Q96MW1 224 aaKnown RBP15.63■□□□□ 0.09
RPAIN-217ENST00000575711 NACC1Q96RE7 527 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 MMTAG2Q9BU76 263 aaKnown RBP15.63■□□□□ 0.09
RPAIN-217ENST00000575711 NT5C3AQ9H0P0 336 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 KIAA1024Q9UPX6 916 aa15.63■□□□□ 0.09
RPAIN-217ENST00000575711 TMEM150BA6NC51 233 aa15.62■□□□□ 0.09
RPAIN-217ENST00000575711 TREHO43280 583 aa15.62■□□□□ 0.09
RPAIN-217ENST00000575711 XRCC6P12956 609 aaKnown RBP eCLIP15.62■□□□□ 0.09
RPAIN-217ENST00000575711 ADAM17P78536 824 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms