RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	FOXP1	Q9H334	677 aa	Predicted RBP	28.55	■■■□□ 2.16
SRRM2-223	ENST00000575701	GABBR1	Q9UBS5	961 aa		28.55	■■■□□ 2.16
SRRM2-223	ENST00000575701	CHMP2A	O43633	222 aa		28.54	■■■□□ 2.16
SRRM2-223	ENST00000575701	NBN	O60934	754 aa		28.54	■■■□□ 2.16
SRRM2-223	ENST00000575701	SLC34A2	O95436	690 aa		28.54	■■■□□ 2.16
SRRM2-223	ENST00000575701	GUCY1B3	Q02153	619 aa		28.54	■■■□□ 2.16
SRRM2-223	ENST00000575701	ZNF484	Q5JVG2	852 aa		28.54	■■■□□ 2.16
SRRM2-223	ENST00000575701	CNKSR3	Q6P9H4	555 aa		28.54	■■■□□ 2.16
SRRM2-223	ENST00000575701	MIER3	Q7Z3K6	550 aa		28.54	■■■□□ 2.16
SRRM2-223	ENST00000575701	CEP131	Q9UPN4	1083 aa		28.54	■■■□□ 2.16
SRRM2-223	ENST00000575701	MARCH6	O60337	910 aa		28.53	■■■□□ 2.16
SRRM2-223	ENST00000575701	BAG4	O95429	457 aa	Known RBP	28.53	■■■□□ 2.16
SRRM2-223	ENST00000575701	GPNMB	Q14956	572 aa		28.53	■■■□□ 2.16
SRRM2-223	ENST00000575701	FAM26D	Q5JW98	314 aa		28.53	■■■□□ 2.16
SRRM2-223	ENST00000575701	FAM109B	Q6ICB4	259 aa	Predicted RBP	28.53	■■■□□ 2.16
SRRM2-223	ENST00000575701	SLFN12	Q8IYM2	578 aa		28.53	■■■□□ 2.16
SRRM2-223	ENST00000575701	GJA10	Q969M2	543 aa		28.53	■■■□□ 2.16
SRRM2-223	ENST00000575701	CXXC1	Q9P0U4	656 aa	Predicted RBP	28.53	■■■□□ 2.16
SRRM2-223	ENST00000575701	PCDHA2	Q9Y5H9	948 aa		28.53	■■■□□ 2.16
SRRM2-223	ENST00000575701	SLC4A7	Q9Y6M7	1214 aa		28.53	■■■□□ 2.16
SRRM2-223	ENST00000575701	WDR81	Q562E7	1941 aa		28.53	■■■□□ 2.16
SRRM2-223	ENST00000575701	ZBBX	A8MT70	800 aa		28.52	■■■□□ 2.16
SRRM2-223	ENST00000575701	ATP4A	P20648	1035 aa		28.52	■■■□□ 2.16
SRRM2-223	ENST00000575701	PPP2R5C	Q13362	524 aa		28.52	■■■□□ 2.16
SRRM2-223	ENST00000575701	RUFY4	Q6ZNE9	571 aa		28.52	■■■□□ 2.16
SRRM2-223	ENST00000575701	POTED	Q86YR6	584 aa		28.52	■■■□□ 2.16
SRRM2-223	ENST00000575701	EFCAB14	O75071	495 aa		28.51	■■■□□ 2.15
SRRM2-223	ENST00000575701	GNL2	Q13823	731 aa	Known RBP	28.51	■■■□□ 2.15
SRRM2-223	ENST00000575701	MBTPS1	Q14703	1052 aa		28.51	■■■□□ 2.15
SRRM2-223	ENST00000575701	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	28.51	■■■□□ 2.15
SRRM2-223	ENST00000575701	TMEM265	A0A087WTH1	108 aa		28.5	■■■□□ 2.15
SRRM2-223	ENST00000575701	SMIM35	A0A1B0GVV1	85 aa		28.5	■■■□□ 2.15
SRRM2-223	ENST00000575701	CTSH	P09668	335 aa		28.5	■■■□□ 2.15
SRRM2-223	ENST00000575701	MTHFD1L	Q6UB35	978 aa		28.5	■■■□□ 2.15
SRRM2-223	ENST00000575701	TRAPPC12	Q8WVT3	735 aa		28.5	■■■□□ 2.15
SRRM2-223	ENST00000575701	HAS1	Q92839	578 aa		28.5	■■■□□ 2.15
SRRM2-223	ENST00000575701	SLC9A7	Q96T83	725 aa		28.5	■■■□□ 2.15
SRRM2-223	ENST00000575701	NRBP2	Q9NSY0	501 aa		28.5	■■■□□ 2.15
SRRM2-223	ENST00000575701	VAV3	Q9UKW4	847 aa		28.5	■■■□□ 2.15
SRRM2-223	ENST00000575701	NEMF	O60524	1076 aa		28.49	■■■□□ 2.15
SRRM2-223	ENST00000575701	OAT	P04181	439 aa		28.49	■■■□□ 2.15
SRRM2-223	ENST00000575701	ORC2	Q13416	577 aa	Predicted RBP	28.49	■■■□□ 2.15
SRRM2-223	ENST00000575701	DNAJB3	Q8WWF6	145 aa		28.49	■■■□□ 2.15
SRRM2-223	ENST00000575701	TET1	Q8NFU7	2136 aa		28.48	■■■□□ 2.15
SRRM2-223	ENST00000575701	ABHD14A-ACY1	A0A1B0GW23	586 aa		28.48	■■■□□ 2.15
SRRM2-223	ENST00000575701	KLRC1	P26715	233 aa		28.48	■■■□□ 2.15
SRRM2-223	ENST00000575701	PRKCE	Q02156	737 aa		28.48	■■■□□ 2.15
SRRM2-223	ENST00000575701	RAB30	Q15771	203 aa		28.48	■■■□□ 2.15
SRRM2-223	ENST00000575701	ZNF697	Q5TEC3	545 aa		28.48	■■■□□ 2.15
SRRM2-223	ENST00000575701	IER5	Q5VY09	327 aa		28.48	■■■□□ 2.15
SRRM2-223	ENST00000575701	NOSTRIN	Q8IVI9	506 aa		28.48	■■■□□ 2.15
SRRM2-223	ENST00000575701	NME8	Q8N427	588 aa		28.48	■■■□□ 2.15
SRRM2-223	ENST00000575701	PHOSPHO2	Q8TCD6	241 aa		28.48	■■■□□ 2.15
SRRM2-223	ENST00000575701	ZBTB42	B2RXF5	422 aa		28.47	■■■□□ 2.15
SRRM2-223	ENST00000575701		M0QZ92	97 aa		28.47	■■■□□ 2.15
SRRM2-223	ENST00000575701	ZNF862	O60290	1169 aa		28.47	■■■□□ 2.15
SRRM2-223	ENST00000575701	DKC1	O60832	514 aa	Known RBP eCLIP	28.47	■■■□□ 2.15
SRRM2-223	ENST00000575701	ATP2A2	P16615	1042 aa	Known RBP	28.47	■■■□□ 2.15
SRRM2-223	ENST00000575701	KCNJ6	P48051	423 aa		28.47	■■■□□ 2.15
SRRM2-223	ENST00000575701	MGAT3	Q09327	533 aa		28.47	■■■□□ 2.15
SRRM2-223	ENST00000575701	IKBKE	Q14164	716 aa		28.47	■■■□□ 2.15
SRRM2-223	ENST00000575701	CALCRL	Q16602	461 aa		28.47	■■■□□ 2.15
SRRM2-223	ENST00000575701	PLEKHG4	Q58EX7	1191 aa		28.47	■■■□□ 2.15
SRRM2-223	ENST00000575701	FAM49A	Q9H0Q0	323 aa	Predicted RBP	28.47	■■■□□ 2.15
SRRM2-223	ENST00000575701	DNAJB2	P25686	324 aa		28.46	■■■□□ 2.15
SRRM2-223	ENST00000575701	GJB2	P29033	226 aa		28.46	■■■□□ 2.15
SRRM2-223	ENST00000575701	TRAPPC10	P48553	1259 aa		28.46	■■■□□ 2.15
SRRM2-223	ENST00000575701	MRPS6	P82932	125 aa	Known RBP	28.46	■■■□□ 2.15
SRRM2-223	ENST00000575701	UGCG	Q16739	394 aa		28.46	■■■□□ 2.15
SRRM2-223	ENST00000575701	DEFB123	Q8N688	67 aa		28.46	■■■□□ 2.15
SRRM2-223	ENST00000575701	SEPT8	Q92599	483 aa		28.46	■■■□□ 2.15
SRRM2-223	ENST00000575701	APBB2	Q92870	758 aa		28.46	■■■□□ 2.15
SRRM2-223	ENST00000575701	NOL7	Q9UMY1	257 aa	Known RBP	28.46	■■■□□ 2.15
SRRM2-223	ENST00000575701	SMC3	Q9UQE7	1217 aa		28.46	■■■□□ 2.15
SRRM2-223	ENST00000575701	MAGEB2	O15479	319 aa		28.45	■■■□□ 2.14
SRRM2-223	ENST00000575701	C22orf31	O95567	290 aa		28.45	■■■□□ 2.14
SRRM2-223	ENST00000575701	CHRNA1	P02708	482 aa		28.45	■■■□□ 2.14
SRRM2-223	ENST00000575701	U2AF2	P26368	475 aa	Known RBP eCLIP	28.45	■■■□□ 2.14	2e-17	■■■□□ 18.7
SRRM2-223	ENST00000575701	PSMC5	P62195	406 aa		28.45	■■■□□ 2.14
SRRM2-223	ENST00000575701	XKR3	Q5GH77	459 aa		28.45	■■■□□ 2.14
SRRM2-223	ENST00000575701	ZBTB10	Q96DT7	871 aa		28.45	■■■□□ 2.14
SRRM2-223	ENST00000575701	PBX4	Q9BYU1	374 aa		28.45	■■■□□ 2.14
SRRM2-223	ENST00000575701	MSRA	Q9UJ68	235 aa		28.45	■■■□□ 2.14
SRRM2-223	ENST00000575701	CDY2A	Q9Y6F7	541 aa		28.45	■■■□□ 2.14
SRRM2-223	ENST00000575701	SI	P14410	1827 aa		28.44	■■■□□ 2.14
SRRM2-223	ENST00000575701	EML1	O00423	815 aa		28.44	■■■□□ 2.14
SRRM2-223	ENST00000575701	WDR5	P61964	334 aa	Known RBP	28.44	■■■□□ 2.14
SRRM2-223	ENST00000575701	EPHA7	Q15375	998 aa		28.44	■■■□□ 2.14
SRRM2-223	ENST00000575701	TRMT1L	Q7Z2T5	733 aa	Known RBP	28.44	■■■□□ 2.14
SRRM2-223	ENST00000575701	DBF4B	Q8NFT6	615 aa		28.44	■■■□□ 2.14
SRRM2-223	ENST00000575701	PCDHA12	Q9UN75	941 aa		28.44	■■■□□ 2.14
SRRM2-223	ENST00000575701	TRPV2	Q9Y5S1	764 aa		28.44	■■■□□ 2.14
SRRM2-223	ENST00000575701	SQOR	Q9Y6N5	450 aa		28.44	■■■□□ 2.14
SRRM2-223	ENST00000575701	GRXCR1	A8MXD5	290 aa		28.43	■■■□□ 2.14
SRRM2-223	ENST00000575701	P4HB	P07237	508 aa	Known RBP	28.43	■■■□□ 2.14
SRRM2-223	ENST00000575701	QARS	P47897	775 aa	Known RBP	28.43	■■■□□ 2.14
SRRM2-223	ENST00000575701	SPIRE1	Q08AE8	756 aa		28.43	■■■□□ 2.14
SRRM2-223	ENST00000575701	USP38	Q8NB14	1042 aa		28.43	■■■□□ 2.14
SRRM2-223	ENST00000575701	TIFA	Q96CG3	184 aa		28.43	■■■□□ 2.14
SRRM2-223	ENST00000575701	MTMR9	Q96QG7	549 aa		28.43	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms