RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 MTMR1Q13613 665 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 WTAPQ15007 396 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 DUSP6Q16828 381 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 SLC35G1Q2M3R5 365 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 USP17L6PQ6QN14 398 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 TMEM184AQ6ZMB5 413 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 PLPPR4Q7Z2D5 763 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 RALYLQ86SE5 291 aaKnown RBP10.33□□□□□ -0.76
SMG6-218ENST00000575454 RTN4RL1Q86UN2 441 aaPredicted RBP10.33□□□□□ -0.76
SMG6-218ENST00000575454 UBALD2Q8IYN6 164 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 LINC01599Q8WXQ3 324 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 CELF4Q9BZC1 486 aaKnown RBP10.33□□□□□ -0.76
SMG6-218ENST00000575454 RWDD1Q9H446 243 aaPredicted RBP10.33□□□□□ -0.76
SMG6-218ENST00000575454 C1orf112Q9NSG2 853 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 TRPC6Q9Y210 931 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 LZTS1Q9Y250 596 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 NR2E1Q9Y466 385 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 PCDHA2Q9Y5H9 948 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 RIF1Q5UIP0 2472 aaKnown RBP10.33□□□□□ -0.76
SMG6-218ENST00000575454 IGSF9BQ9UPX0 1349 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 KDM3AQ9Y4C1 1321 aa10.33□□□□□ -0.76
SMG6-218ENST00000575454 DENND3A2RUS2 1198 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 MEIS2O14770 477 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 PER2O15055 1255 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 GALR2O43603 387 aaPredicted RBP10.32□□□□□ -0.76
SMG6-218ENST00000575454 ATP9AO75110 1047 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 GNAQP50148 359 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 SLC26A2P50443 739 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 KRT76Q01546 638 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 CYB5R4Q7L1T6 521 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 CHD1LQ86WJ1 897 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 PLEKHM2Q8IWE5 1019 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 THNSL1Q8IYQ7 743 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 CTCFLQ8NI51 663 aaPredicted RBP10.32□□□□□ -0.76
SMG6-218ENST00000575454 RASGRP4Q8TDF6 673 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 RIPOR3Q96MK2 946 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 SPZ1Q9BXG8 430 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 PSTPIP2Q9H939 334 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 JPH1Q9HDC5 661 aaPredicted RBP10.32□□□□□ -0.76
SMG6-218ENST00000575454 NGRNQ9NPE2 291 aaKnown RBP10.32□□□□□ -0.76
SMG6-218ENST00000575454 TELO2Q9Y4R8 837 aa10.32□□□□□ -0.76
SMG6-218ENST00000575454 SMIM35A0A1B0GVV1 85 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 SPDYE3A6NKU9 549 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 GPR182O15218 404 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 FGF18O76093 207 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 ITGB5P18084 799 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 LAG3P18627 525 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 VCPP55072 806 aaKnown RBP10.31□□□□□ -0.76
SMG6-218ENST00000575454 MTMR3Q13615 1198 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 TPRNQ4KMQ1 711 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 SLC24A5Q71RS6 500 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 TEX2Q8IWB9 1127 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 SMC5Q8IY18 1101 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 NCOA7Q8NI08 942 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 PIBF1Q8WXW3 757 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 NECTIN4Q96NY8 510 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 S1PR5Q9H228 398 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 ATP6V0A4Q9HBG4 840 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 JADE2Q9NQC1 790 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 RGS18Q9NS28 235 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 FAM86C1Q9NVL1 165 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 TMEM260Q9NX78 707 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 UBIAD1Q9Y5Z9 338 aa10.31□□□□□ -0.76
SMG6-218ENST00000575454 CACNA1GO43497 2377 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 DMXL1Q9Y485 3027 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 TBKBP1A7MCY6 615 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 H0Y858 1186 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 FSCN2O14926 492 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 HOXA2O43364 376 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 RPS6KA5O75582 802 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 DDAH1O94760 285 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 PPM1AP35813 382 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 TECP42680 631 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 STAT5BP51692 787 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 PLCB3Q01970 1234 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 KRT17Q04695 432 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 TMEM62Q0P6H9 643 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 NFX1Q12986 1120 aaKnown RBP10.3□□□□□ -0.76
SMG6-218ENST00000575454 BMS1Q14692 1282 aaKnown RBP10.3□□□□□ -0.76
SMG6-218ENST00000575454 B4GALNT3Q6L9W6 998 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 CES5AQ6NT32 575 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 ANKRD54Q6NXT1 300 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 TMTC2Q8N394 836 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 KREMEN2Q8NCW0 462 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 RUFY2Q8WXA3 655 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 SDF4Q9BRK5 362 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 ELAC1Q9H777 363 aaKnown RBP10.3□□□□□ -0.76
SMG6-218ENST00000575454 SLC9A2Q9UBY0 812 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 SORCS3Q9UPU3 1222 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 PTPRZ1P23471 2315 aaPredicted RBP10.3□□□□□ -0.76
SMG6-218ENST00000575454 CACNA1BQ00975 2339 aa10.3□□□□□ -0.76
SMG6-218ENST00000575454 GVINP1Q7Z2Y8 2422 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 ZNF292O60281 2723 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 SIP14410 1827 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 NBL1P41271 181 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 ERVFC1P60507 584 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 NUCB1Q02818 461 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 ITIH3Q06033 890 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 KCNC3Q14003 757 aa10.29□□□□□ -0.76
SMG6-218ENST00000575454 PLCB4Q15147 1175 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms