RNA–Protein interactions for RNA: ENST00000575171.1

NXN-208, Transcript of nucleoredoxin, human

TSL 2

Gene NXN, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXN-208	ENST00000575171	COL20A1	Q9P218	1284 aa		11.13	□□□□□ -0.63
NXN-208	ENST00000575171	ORC3	Q9UBD5	711 aa	Predicted RBP	11.13	□□□□□ -0.63
NXN-208	ENST00000575171	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.13	□□□□□ -0.63
NXN-208	ENST00000575171	DDX49	Q9Y6V7	483 aa	Known RBP	11.13	□□□□□ -0.63
NXN-208	ENST00000575171	LTBP2	Q14767	1821 aa		11.13	□□□□□ -0.63
NXN-208	ENST00000575171	STK36	Q9NRP7	1315 aa		11.12	□□□□□ -0.63
NXN-208	ENST00000575171	JAK2	O60674	1132 aa		11.12	□□□□□ -0.63
NXN-208	ENST00000575171	EIF2AK2	P19525	551 aa	Known RBP	11.12	□□□□□ -0.63
NXN-208	ENST00000575171	CNGA1	P29973	690 aa		11.12	□□□□□ -0.63
NXN-208	ENST00000575171	HSD17B4	P51659	736 aa		11.12	□□□□□ -0.63
NXN-208	ENST00000575171	NLRP5	P59047	1200 aa		11.12	□□□□□ -0.63
NXN-208	ENST00000575171	PSMA6	P60900	246 aa	Known RBP	11.12	□□□□□ -0.63
NXN-208	ENST00000575171	CACNB2	Q08289	660 aa	Predicted RBP	11.12	□□□□□ -0.63
NXN-208	ENST00000575171	NSUN7	Q8NE18	718 aa	Known RBP	11.12	□□□□□ -0.63
NXN-208	ENST00000575171	CCDC148	Q8NFR7	591 aa		11.12	□□□□□ -0.63
NXN-208	ENST00000575171	STK32A	Q8WU08	396 aa		11.12	□□□□□ -0.63
NXN-208	ENST00000575171	WASF1	Q92558	559 aa		11.12	□□□□□ -0.63
NXN-208	ENST00000575171	PAWR	Q96IZ0	340 aa	Known RBP	11.12	□□□□□ -0.63
NXN-208	ENST00000575171	TMX3	Q96JJ7	454 aa		11.12	□□□□□ -0.63
NXN-208	ENST00000575171	AIFM3	Q96NN9	605 aa		11.12	□□□□□ -0.63
NXN-208	ENST00000575171	RMDN3	Q96TC7	470 aa		11.12	□□□□□ -0.63
NXN-208	ENST00000575171	CNPY2	Q9Y2B0	182 aa		11.12	□□□□□ -0.63
NXN-208	ENST00000575171	NCOR1	O75376	2440 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	ASTN1	O14525	1302 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	ASB14	A6NK59	587 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	SPDYE3	A6NKU9	549 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	F11	P03951	625 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	CCND3	P30281	292 aa	Predicted RBP	11.11	□□□□□ -0.63
NXN-208	ENST00000575171	MRPL12	P52815	198 aa	Known RBP	11.11	□□□□□ -0.63
NXN-208	ENST00000575171	TEAD4	Q15561	434 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	SWI5	Q1ZZU3	235 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	LRIT3	Q3SXY7	679 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	RIPOR1	Q6ZS17	1223 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	EEPD1	Q7L9B9	569 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	MSL3	Q8N5Y2	521 aa	Known RBP	11.11	□□□□□ -0.63
NXN-208	ENST00000575171	SAMD3	Q8N6K7	520 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	DNER	Q8NFT8	737 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	NSUN6	Q8TEA1	469 aa	Known RBP	11.11	□□□□□ -0.63
NXN-208	ENST00000575171	PGBD1	Q96JS3	809 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	ALG1	Q9BT22	464 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.11	□□□□□ -0.63	4e-7	■■■■□ 19.7
NXN-208	ENST00000575171	C6orf50	Q9HD87	102 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	RIC8A	Q9NPQ8	531 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	MAP3K20	Q9NYL2	800 aa	Known RBP	11.11	□□□□□ -0.63
NXN-208	ENST00000575171	STXBP5L	Q9Y2K9	1186 aa		11.11	□□□□□ -0.63
NXN-208	ENST00000575171	COL11A1	P12107	1806 aa	Predicted RBP	11.11	□□□□□ -0.63
NXN-208	ENST00000575171	SYNGAP1	Q96PV0	1343 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	ZNF236	Q9UL36	1845 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171		B4DLN1	442 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	MEIS2	O14770	477 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	WFS1	O76024	890 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	SNAI1	O95863	264 aa	Predicted RBP	11.1	□□□□□ -0.63
NXN-208	ENST00000575171	MYCL	P12524	364 aa	Predicted RBP	11.1	□□□□□ -0.63
NXN-208	ENST00000575171	XBP1	P17861	261 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	NOS2	P35228	1153 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	GHRHR	Q02643	423 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	MAP3K21	Q5TCX8	1036 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	JAKMIP3	Q5VZ66	844 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	MAMDC4	Q6UXC1	1216 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171		Q7L0L9	218 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	HSCB	Q8IWL3	235 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	FBXO16	Q8IX29	292 aa	Predicted RBP	11.1	□□□□□ -0.63
NXN-208	ENST00000575171	FAM184A	Q8NB25	1140 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	TRPV1	Q8NER1	839 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	SCG3	Q8WXD2	468 aa	Known RBP	11.1	□□□□□ -0.63
NXN-208	ENST00000575171	IRF7	Q92985	503 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	MAF1	Q9H063	256 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	PXMP2	Q9NR77	195 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	TMEM260	Q9NX78	707 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	MTMR10	Q9NXD2	777 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	ZNF232	Q9UNY5	417 aa		11.1	□□□□□ -0.63
NXN-208	ENST00000575171	RPTOR	Q8N122	1335 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	ESYT2	A0FGR8	921 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	SERTM1	A2A2V5	107 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	CYBA	P13498	195 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	FDPS	P14324	419 aa	Known RBP	11.09	□□□□□ -0.63
NXN-208	ENST00000575171	GNA11	P29992	359 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	HMGN5	P82970	282 aa	Known RBP	11.09	□□□□□ -0.63
NXN-208	ENST00000575171	ACVR2B	Q13705	512 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	TRIM29	Q14134	588 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	TMEM164	Q5U3C3	297 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	ANO1	Q5XXA6	986 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	DEFB123	Q8N688	67 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	C1orf216	Q8TAB5	229 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	RASGRP4	Q8TDF6	673 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	ZDHHC1	Q8WTX9	485 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	PDCD2L	Q9BRP1	358 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	LLPH	Q9BRT6	129 aa	Known RBP	11.09	□□□□□ -0.63
NXN-208	ENST00000575171	ZMYND12	Q9H0C1	365 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	GLT8D2	Q9H1C3	349 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	EHMT1	Q9H9B1	1298 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	GPAM	Q9HCL2	828 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	SH3GLB2	Q9NR46	395 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	GJB4	Q9NTQ9	266 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	PCDHA6	Q9UN73	950 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	KCNJ14	Q9UNX9	436 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	PCDHA8	Q9Y5H6	950 aa		11.09	□□□□□ -0.63
NXN-208	ENST00000575171	LOC102724159	A0A0B4J2E5	919 aa		11.08	□□□□□ -0.64
NXN-208	ENST00000575171	CDC14C	A4D256	554 aa		11.08	□□□□□ -0.64
NXN-208	ENST00000575171	LGR5	O75473	907 aa		11.08	□□□□□ -0.64

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