RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	DGKD	Q16760	1214 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	ZSCAN23	Q3MJ62	389 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	BRDT	Q58F21	947 aa	Predicted RBP	13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	GJC2	Q5T442	439 aa	Predicted RBP	13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	NT5DC1	Q5TFE4	455 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	TLK2	Q86UE8	772 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	SPATA20	Q8TB22	786 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	AFG1L	Q8WV93	481 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	FAM167A	Q96KS9	214 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	PCYT2	Q99447	389 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	MTR	Q99707	1265 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	NRBP2	Q9NSY0	501 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	KIAA1468	Q9P260	1216 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	TUBE1	Q9UJT0	475 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	TELO2	Q9Y4R8	837 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	PPME1	Q9Y570	386 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	LOXHD1	Q8IVV2	1947 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	WDR81	Q562E7	1941 aa		13.27	□□□□□ -0.28
PRPF8-212	ENST00000575116	ZNF862	O60290	1169 aa		13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	STBD1	O95210	358 aa		13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	MMP3	P08254	477 aa		13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	HSPA8	P11142	646 aa	Known RBP	13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	YWHAB	P31946	246 aa	Known RBP	13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	SARS	P49591	514 aa	Known RBP	13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	CPT1A	P50416	773 aa		13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	GJA9	P57773	515 aa		13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	DPYD	Q12882	1025 aa		13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	TRIM32	Q13049	653 aa		13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	PIGO	Q8TEQ8	1089 aa		13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	GSDMA	Q96QA5	445 aa		13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	NIFK	Q9BYG3	293 aa	Known RBP	13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	TRIM9	Q9C026	710 aa		13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	UPF3A	Q9H1J1	476 aa	Known RBP	13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	BHMT2	Q9H2M3	363 aa		13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	PTCH2	Q9Y6C5	1203 aa		13.27	□□□□□ -0.29
PRPF8-212	ENST00000575116	PVALEF	A0A1B0GWK0	134 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	FOXN1	O15353	648 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	MSC	O60682	206 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	KPNA6	O60684	536 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	OAT	P04181	439 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	RARB	P10826	455 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	ATP4A	P20648	1035 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	CNGA1	P29973	690 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	MYH9	P35579	1960 aa	Known RBP	13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	CTCF	P49711	727 aa	Predicted RBP	13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	RARRES1	P49788	294 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	PRKCE	Q02156	737 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	PNOC	Q13519	176 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	EXOC8	Q8IYI6	725 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	BBX	Q8WY36	941 aa	Predicted RBP	13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	GLG1	Q92896	1179 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	SMARCE1	Q969G3	411 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	TIPIN	Q9BVW5	301 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	GTPBP4	Q9BZE4	634 aa	Known RBP	13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	SPC25	Q9HBM1	224 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	HMX1	Q9NP08	348 aa	Predicted RBP	13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	ERAP1	Q9NZ08	941 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	PCDHA5	Q9Y5H7	936 aa		13.26	□□□□□ -0.29
PRPF8-212	ENST00000575116	ARHGEF35	A5YM69	484 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	MYMK	A6NI61	221 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	ZBTB39	O15060	712 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	ZEB2	O60315	1214 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	INHA	P05111	366 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	LGALS2	P05162	132 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	SSB	P05455	408 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	PRR29	P0C7W0	189 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	CYP11B2	P19099	503 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	CCND3	P30281	292 aa	Predicted RBP	13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	ZNF445	P59923	1031 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	CUL4B	Q13620	913 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	DHX8	Q14562	1220 aa	Known RBP	13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	KCNB1	Q14721	858 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	PKN2	Q16513	984 aa	Known RBP	13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	UTP14C	Q5TAP6	766 aa	Known RBP	13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	RINT1	Q6NUQ1	792 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	SASS6	Q6UVJ0	657 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	C1orf186	Q6ZWK4	172 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	ANO5	Q75V66	913 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	CTU1	Q7Z7A3	348 aa	Known RBP	13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	GPBP1	Q86WP2	473 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	CKAP2L	Q8IYA6	745 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	GRAMD1C	Q8IYS0	662 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	TRIML1	Q8N9V2	468 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	ATP8B4	Q8TF62	1192 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	DDX12P	Q92771	950 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	STAM	Q92783	540 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	CCDC47	Q96A33	483 aa	Known RBP	13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	C16orf70	Q9BSU1	422 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	GZF1	Q9H116	711 aa	Predicted RBP	13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	RMND1	Q9NWS8	449 aa		13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	DDX20	Q9UHI6	824 aa	Known RBP	13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116	ZNF215	Q9UL58	517 aa	Predicted RBP	13.25	□□□□□ -0.29
PRPF8-212	ENST00000575116		A0A087WWV3	80 aa		13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	SYCE3	A1L190	88 aa		13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	HBP1	O60381	514 aa		13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	RPN1	P04843	607 aa	Known RBP	13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	HSPA1A	P0DMV8	641 aa	Known RBP	13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	HSPA1B	P0DMV9	641 aa	Known RBP	13.24	□□□□□ -0.29
PRPF8-212	ENST00000575116	GUCY2C	P25092	1073 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms