RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 HERVK_113P62684 666 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 KCNA1Q09470 495 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 KCNMA1Q12791 1236 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 ITGB3BPQ13352 177 aaPredicted RBP11.53□□□□□ -0.56
USP43-205ENST00000574408 MTMR1Q13613 665 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 PARVGQ9HBI0 331 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 TRAF3IP3Q9Y228 551 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 RIPK3Q9Y572 518 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 MRFAP1Q9Y605 127 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 FRMPD4Q14CM0 1322 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 ARHGEF35A5YM69 484 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 PDXKO00764 312 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 CALUO43852 315 aaPredicted RBP11.53□□□□□ -0.56
USP43-205ENST00000574408 PLEKP08567 350 aaPredicted RBP11.53□□□□□ -0.56
USP43-205ENST00000574408 MUTP22033 750 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 MARSP56192 900 aaKnown RBP11.53□□□□□ -0.56
USP43-205ENST00000574408 KRT83P78385 493 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 NIPA1Q7RTP0 329 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 ZC3H3Q8IXZ2 948 aaKnown RBP11.53□□□□□ -0.56
USP43-205ENST00000574408 LSM14BQ9BX40 385 aaKnown RBP11.53□□□□□ -0.56
USP43-205ENST00000574408 AGO4Q9HCK5 861 aaKnown RBP11.53□□□□□ -0.56
USP43-205ENST00000574408 NLRC4Q9NPP4 1024 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 OLFML3Q9NRN5 406 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 TYW1Q9NV66 732 aaKnown RBP11.53□□□□□ -0.56
USP43-205ENST00000574408 PLAGL2Q9UPG8 496 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 LRRC53A6NM62 1247 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 HIRAP54198 1017 aaPredicted RBP11.52□□□□□ -0.57
USP43-205ENST00000574408 PGM5Q15124 567 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 BMT2Q1RMZ1 405 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 CCDC170Q8IYT3 715 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 CCDC42Q96M95 316 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 JADE2Q9NQC1 790 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 ARMCX3Q9UH62 379 aaPredicted RBP11.52□□□□□ -0.57
USP43-205ENST00000574408 PNMA2Q9UL42 364 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 DOCK1Q14185 1865 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 CLIC2O15247 247 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 DHX15O43143 795 aaKnown RBP11.52□□□□□ -0.57
USP43-205ENST00000574408 FDX1P10109 184 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 CYP27A1Q02318 531 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 PPP2R3AQ06190 1150 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 BAATQ14032 418 aaPredicted RBP11.52□□□□□ -0.57
USP43-205ENST00000574408 CCDC122Q5T0U0 273 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 SNRNP48Q6IEG0 339 aaKnown RBP11.52□□□□□ -0.57
USP43-205ENST00000574408 NEK9Q8TD19 979 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 UBXN4Q92575 508 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 KLRG1Q96E93 195 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 PDCD2LQ9BRP1 358 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 MAP3K20Q9NYL2 800 aaKnown RBP11.52□□□□□ -0.57
USP43-205ENST00000574408 ASTN1O14525 1302 aa11.52□□□□□ -0.57
USP43-205ENST00000574408 CTAGE9A4FU28 777 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 TADA3O75528 432 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 NR3C1P04150 777 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 LMNB1P20700 586 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 ZC2HC1CQ53FD0 456 aaPredicted RBP11.51□□□□□ -0.57
USP43-205ENST00000574408 ARHGEF16Q5VV41 709 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 GPC2Q8N158 579 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 BAP1Q92560 729 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 IKZF4Q9H2S9 585 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 HAUS4Q9H6D7 363 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 FAM184BQ9ULE4 1060 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 TESPA1A2RU30 521 aaPredicted RBP11.51□□□□□ -0.57
USP43-205ENST00000574408 EIF3CLB5ME19 914 aaKnown RBP11.51□□□□□ -0.57
USP43-205ENST00000574408 P4HBP07237 508 aaKnown RBP11.51□□□□□ -0.57
USP43-205ENST00000574408 HNRNPH3P31942 346 aaKnown RBP11.51□□□□□ -0.57
USP43-205ENST00000574408 CDK17Q00537 523 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 APBA1Q02410 837 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 KCNH2Q12809 1159 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 MAEAQ7L5Y9 396 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 TRMT1LQ7Z2T5 733 aaKnown RBP11.51□□□□□ -0.57
USP43-205ENST00000574408 FAM178BQ8IXR5 827 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 EIF3CQ99613 913 aaKnown RBP11.51□□□□□ -0.57
USP43-205ENST00000574408 DEF6Q9H4E7 631 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 PXMP2Q9NR77 195 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 ARHGAP20Q9P2F6 1191 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 AKAP3O75969 853 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 RPL13P26373 211 aaKnown RBP11.51□□□□□ -0.57
USP43-205ENST00000574408 SPA17Q15506 151 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 ODR4Q5SWX8 454 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 PDXDC1Q6P996 788 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 KSR1Q8IVT5 923 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 JAKMIP2Q96AA8 810 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 NAPGQ99747 312 aaPredicted RBP11.51□□□□□ -0.57
USP43-205ENST00000574408 MYO1AQ9UBC5 1043 aa11.51□□□□□ -0.57
USP43-205ENST00000574408 RBBP6Q7Z6E9 1792 aaKnown RBP11.5□□□□□ -0.57
USP43-205ENST00000574408 EIF4A3P38919 411 aaKnown RBP11.5□□□□□ -0.57
USP43-205ENST00000574408 CASP4P49662 377 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 POLR2FP61218 127 aaKnown RBP11.5□□□□□ -0.57
USP43-205ENST00000574408 DCAF17Q5H9S7 520 aaPredicted RBP11.5□□□□□ -0.57
USP43-205ENST00000574408 TCERG1LQ5VWI1 586 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 PADI6Q6TGC4 694 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 FRMD5Q7Z6J6 570 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 SAMD3Q8N6K7 520 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 C12orf42Q96LP6 360 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 TMOD4Q9NZQ9 345 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 TCEAL9Q9UHQ7 104 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 ODF2LQ9ULJ1 636 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 PCDHB13Q9Y5F0 798 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 RCCD1A6NED2 376 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 C19orf81C9J6K1 198 aa11.5□□□□□ -0.57
USP43-205ENST00000574408 EIF3DO15371 548 aaKnown RBP eCLIP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms