RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 PCDHB7Q9Y5E2 793 aa13.72□□□□□ -0.21
CTNS-208ENST00000574218 MBLAC1A4D2B0 266 aaPredicted RBP13.71□□□□□ -0.21
CTNS-208ENST00000574218 H0Y858 1186 aa13.71□□□□□ -0.21
CTNS-208ENST00000574218 IFIT3O14879 490 aaKnown RBP13.71□□□□□ -0.21
CTNS-208ENST00000574218 PER2O15055 1255 aa13.71□□□□□ -0.21
CTNS-208ENST00000574218 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.21
CTNS-208ENST00000574218 TMEM62Q0P6H9 643 aa13.71□□□□□ -0.21
CTNS-208ENST00000574218 WTAPQ15007 396 aa13.71□□□□□ -0.21
CTNS-208ENST00000574218 ODR4Q5SWX8 454 aa13.71□□□□□ -0.21
CTNS-208ENST00000574218 CATIPQ7Z7H3 387 aa13.71□□□□□ -0.21
CTNS-208ENST00000574218 THNSL1Q8IYQ7 743 aa13.71□□□□□ -0.21
CTNS-208ENST00000574218 AZI2Q9H6S1 392 aa13.71□□□□□ -0.21
CTNS-208ENST00000574218 SEC63Q9UGP8 760 aaKnown RBP13.71□□□□□ -0.21
CTNS-208ENST00000574218 PADI3Q9ULW8 664 aa13.71□□□□□ -0.21
CTNS-208ENST00000574218 NR2E1Q9Y466 385 aa13.71□□□□□ -0.21
CTNS-208ENST00000574218 CFAP54Q96N23 3096 aa13.7□□□□□ -0.22
CTNS-208ENST00000574218 SARSP49591 514 aaKnown RBP13.7□□□□□ -0.22
CTNS-208ENST00000574218 NFX1Q12986 1120 aaKnown RBP13.7□□□□□ -0.22
CTNS-208ENST00000574218 DUSP6Q16828 381 aa13.7□□□□□ -0.22
CTNS-208ENST00000574218 CYB5R4Q7L1T6 521 aa13.7□□□□□ -0.22
CTNS-208ENST00000574218 RALYLQ86SE5 291 aaKnown RBP13.7□□□□□ -0.22
CTNS-208ENST00000574218 RRP36Q96EU6 259 aaKnown RBP13.7□□□□□ -0.22
CTNS-208ENST00000574218 ASIC4Q96FT7 647 aa13.7□□□□□ -0.22
CTNS-208ENST00000574218 RIPOR3Q96MK2 946 aa13.7□□□□□ -0.22
CTNS-208ENST00000574218 TSHZ2Q9NRE2 1034 aa13.7□□□□□ -0.22
CTNS-208ENST00000574218 PKD2L1Q9P0L9 805 aa13.7□□□□□ -0.22
CTNS-208ENST00000574218 PUF60Q9UHX1 559 aaKnown RBP13.7□□□□□ -0.22
CTNS-208ENST00000574218 TELO2Q9Y4R8 837 aa13.7□□□□□ -0.22
CTNS-208ENST00000574218 PCDHGC5Q9Y5F6 944 aa13.7□□□□□ -0.22
CTNS-208ENST00000574218 MYH9P35579 1960 aaKnown RBP13.7□□□□□ -0.22
CTNS-208ENST00000574218 FAM186AA6NE01 2351 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 IGSF9BQ9UPX0 1349 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 GSTTP1A0A1W2PQM5 241 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 DENND3A2RUS2 1198 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 TBKBP1A7MCY6 615 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 GALR2O43603 387 aaPredicted RBP13.69□□□□□ -0.22
CTNS-208ENST00000574218 CYTH3O43739 400 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 FGF18O76093 207 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 INSRRP14616 1297 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 KCNA2P16389 499 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 SP100P23497 879 aaPredicted RBP13.69□□□□□ -0.22
CTNS-208ENST00000574218 TECP42680 631 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 GATMP50440 423 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 HDAC1Q13547 482 aaPredicted RBP13.69□□□□□ -0.22
CTNS-208ENST00000574218 MTMR1Q13613 665 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 MARCH8Q5T0T0 291 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 PLPP4Q5VZY2 271 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 USP17L6PQ6QN14 398 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 FAM43BQ6ZT52 329 aaPredicted RBP13.69□□□□□ -0.22
CTNS-208ENST00000574218 RTN4RL1Q86UN2 441 aaPredicted RBP13.69□□□□□ -0.22
CTNS-208ENST00000574218 SUSD6Q92537 303 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 CELF4Q9BZC1 486 aaKnown RBP13.69□□□□□ -0.22
CTNS-208ENST00000574218 ENTPD7Q9NQZ7 604 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 TMEM260Q9NX78 707 aa13.69□□□□□ -0.22
CTNS-208ENST00000574218 RIF1Q5UIP0 2472 aaKnown RBP13.68□□□□□ -0.22
CTNS-208ENST00000574218 SPDYE3A6NKU9 549 aa13.68□□□□□ -0.22
CTNS-208ENST00000574218 PIK3CDO00329 1044 aa13.68□□□□□ -0.22
CTNS-208ENST00000574218 KRT76Q01546 638 aa13.68□□□□□ -0.22
CTNS-208ENST00000574218 MTMR3Q13615 1198 aa13.68□□□□□ -0.22
CTNS-208ENST00000574218 B4GALNT3Q6L9W6 998 aa13.68□□□□□ -0.22
CTNS-208ENST00000574218 CES5AQ6NT32 575 aa13.68□□□□□ -0.22
CTNS-208ENST00000574218 ANKRD54Q6NXT1 300 aa13.68□□□□□ -0.22
CTNS-208ENST00000574218 LLGL2Q6P1M3 1020 aa13.68□□□□□ -0.22
CTNS-208ENST00000574218 UBALD2Q8IYN6 164 aa13.68□□□□□ -0.22
CTNS-208ENST00000574218 NME8Q8N427 588 aa13.68□□□□□ -0.22
CTNS-208ENST00000574218 CTCFLQ8NI51 663 aaPredicted RBP13.68□□□□□ -0.22
CTNS-208ENST00000574218 ATP8B4Q8TF62 1192 aa13.68□□□□□ -0.22
CTNS-208ENST00000574218 APOL5Q9BWW9 433 aa13.68□□□□□ -0.22
CTNS-208ENST00000574218 C1orf112Q9NSG2 853 aa13.68□□□□□ -0.22
CTNS-208ENST00000574218 GINS2Q9Y248 185 aa13.68□□□□□ -0.22
CTNS-208ENST00000574218 PCDHA2Q9Y5H9 948 aa13.68□□□□□ -0.22
CTNS-208ENST00000574218 PROB1E7EW31 1015 aa13.67□□□□□ -0.22
CTNS-208ENST00000574218 ATP9AO75110 1047 aa13.67□□□□□ -0.22
CTNS-208ENST00000574218 RPS6KA5O75582 802 aa13.67□□□□□ -0.22
CTNS-208ENST00000574218 HOXB8P17481 243 aaPredicted RBP13.67□□□□□ -0.22
CTNS-208ENST00000574218 LAG3P18627 525 aa13.67□□□□□ -0.22
CTNS-208ENST00000574218 KIF5BP33176 963 aa13.67□□□□□ -0.22
CTNS-208ENST00000574218 RBM10P98175 930 aaKnown RBP13.67□□□□□ -0.22
CTNS-208ENST00000574218 TMEM266Q2M3C6 531 aa13.67□□□□□ -0.22
CTNS-208ENST00000574218 SLC35G1Q2M3R5 365 aa13.67□□□□□ -0.22
CTNS-208ENST00000574218 TPRNQ4KMQ1 711 aa13.67□□□□□ -0.22
CTNS-208ENST00000574218 CRIPAKQ8N1N5 446 aa13.67□□□□□ -0.22
CTNS-208ENST00000574218 COLGALT1Q8NBJ5 622 aa13.67□□□□□ -0.22
CTNS-208ENST00000574218 KREMEN2Q8NCW0 462 aa13.67□□□□□ -0.22
CTNS-208ENST00000574218 SDF4Q9BRK5 362 aa13.67□□□□□ -0.22
CTNS-208ENST00000574218 MFSD1Q9H3U5 465 aa13.67□□□□□ -0.22
CTNS-208ENST00000574218 JPH1Q9HDC5 661 aaPredicted RBP13.67□□□□□ -0.22
CTNS-208ENST00000574218 SORCS3Q9UPU3 1222 aa13.67□□□□□ -0.22
CTNS-208ENST00000574218 SMIM35A0A1B0GVV1 85 aa13.66□□□□□ -0.22
CTNS-208ENST00000574218 MAFGO15525 162 aa13.66□□□□□ -0.22
CTNS-208ENST00000574218 ERVFC1P60507 584 aa13.66□□□□□ -0.22
CTNS-208ENST00000574218 TROAPQ12815 778 aa13.66□□□□□ -0.22
CTNS-208ENST00000574218 NCOA7Q8NI08 942 aa13.66□□□□□ -0.22
CTNS-208ENST00000574218 CASP10Q92851 521 aa13.66□□□□□ -0.22
CTNS-208ENST00000574218 ZBTB10Q96DT7 871 aa13.66□□□□□ -0.22
CTNS-208ENST00000574218 NECTIN4Q96NY8 510 aa13.66□□□□□ -0.22
CTNS-208ENST00000574218 TCF25Q9BQ70 676 aa13.66□□□□□ -0.22
CTNS-208ENST00000574218 SPZ1Q9BXG8 430 aa13.66□□□□□ -0.22
CTNS-208ENST00000574218 ATP6V0A4Q9HBG4 840 aa13.66□□□□□ -0.22
CTNS-208ENST00000574218 NGRNQ9NPE2 291 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms