RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 TUBE1Q9UJT0 475 aa19.43■□□□□ 0.7
CLDN7-207ENST00000574070 PCDHA12Q9UN75 941 aa19.43■□□□□ 0.7
CLDN7-207ENST00000574070 MAFBQ9Y5Q3 323 aaPredicted RBP19.43■□□□□ 0.7
CLDN7-207ENST00000574070 DNAH12Q6ZR08 3092 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 IQCF3P0C7M6 154 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 CKBP12277 381 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 SELPP16109 830 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 HOXC8P31273 242 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 ORC2Q13416 577 aaPredicted RBP19.42■□□□□ 0.7
CLDN7-207ENST00000574070 NBR1Q14596 966 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 DEFB128Q7Z7B8 93 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 SERINC5Q86VE9 423 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 RPUSD2Q8IZ73 545 aaKnown RBP19.42■□□□□ 0.7
CLDN7-207ENST00000574070 BANK1Q8NDB2 785 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 TRAPPC12Q8WVT3 735 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 BBXQ8WY36 941 aaPredicted RBP19.42■□□□□ 0.7
CLDN7-207ENST00000574070 WNT8BQ93098 351 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 FAM167AQ96KS9 214 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 FAM161BQ96MY7 647 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 TTC12Q9H892 705 aaPredicted RBP19.42■□□□□ 0.7
CLDN7-207ENST00000574070 NRBP2Q9NSY0 501 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 VAV3Q9UKW4 847 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 IGSF9BQ9UPX0 1349 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 KAT6AQ92794 2004 aa19.42■□□□□ 0.7
CLDN7-207ENST00000574070 EML1O00423 815 aa19.41■□□□□ 0.7
CLDN7-207ENST00000574070 OATP04181 439 aa19.41■□□□□ 0.7
CLDN7-207ENST00000574070 ATP4AP20648 1035 aa19.41■□□□□ 0.7
CLDN7-207ENST00000574070 PRKCEQ02156 737 aa19.41■□□□□ 0.7
CLDN7-207ENST00000574070 B3GNT9Q6UX72 402 aa19.41■□□□□ 0.7
CLDN7-207ENST00000574070 LRRC8DQ7L1W4 858 aa19.41■□□□□ 0.7
CLDN7-207ENST00000574070 TMEM60Q9H2L4 133 aa19.41■□□□□ 0.7
CLDN7-207ENST00000574070 IL23AQ9NPF7 189 aa19.41■□□□□ 0.7
CLDN7-207ENST00000574070 CEP131Q9UPN4 1083 aa19.41■□□□□ 0.7
CLDN7-207ENST00000574070 DKC1O60832 514 aaKnown RBP eCLIP19.4■□□□□ 0.7
CLDN7-207ENST00000574070 CTSHP09668 335 aa19.4■□□□□ 0.7
CLDN7-207ENST00000574070 OR52Z1P0C646 297 aa19.4■□□□□ 0.7
CLDN7-207ENST00000574070 EPHB4P54760 987 aa19.4■□□□□ 0.7
CLDN7-207ENST00000574070 ADAM17P78536 824 aa19.4■□□□□ 0.7
CLDN7-207ENST00000574070 EPHA7Q15375 998 aa19.4■□□□□ 0.7
CLDN7-207ENST00000574070 UGCGQ16739 394 aa19.4■□□□□ 0.7
CLDN7-207ENST00000574070 RILPL1Q5EBL4 403 aa19.4■□□□□ 0.7
CLDN7-207ENST00000574070 ZNF484Q5JVG2 852 aa19.4■□□□□ 0.7
CLDN7-207ENST00000574070 ZNF618Q5T7W0 954 aa19.4■□□□□ 0.7
CLDN7-207ENST00000574070 TAF2Q6P1X5 1199 aa19.4■□□□□ 0.7
CLDN7-207ENST00000574070 PSRC1Q6PGN9 363 aaPredicted RBP19.4■□□□□ 0.7
CLDN7-207ENST00000574070 RSPH3Q86UC2 560 aa19.4■□□□□ 0.7
CLDN7-207ENST00000574070 SPRYD3Q8NCJ5 442 aa19.4■□□□□ 0.7
CLDN7-207ENST00000574070 ZBTB10Q96DT7 871 aa19.4■□□□□ 0.7
CLDN7-207ENST00000574070 MTMR9Q96QG7 549 aa19.4■□□□□ 0.7
CLDN7-207ENST00000574070 FTOQ9C0B1 505 aaKnown RBP eCLIP19.4■□□□□ 0.7
CLDN7-207ENST00000574070 FAM49AQ9H0Q0 323 aaPredicted RBP19.4■□□□□ 0.7
CLDN7-207ENST00000574070 SEPT9Q9UHD8 586 aaPredicted RBP19.4■□□□□ 0.7
CLDN7-207ENST00000574070 TRIP12Q14669 1992 aaPredicted RBP19.4■□□□□ 0.7
CLDN7-207ENST00000574070 VCANP13611 3396 aa19.4■□□□□ 0.7
CLDN7-207ENST00000574070 SYT1P21579 422 aa19.39■□□□□ 0.69
CLDN7-207ENST00000574070 RFC2P35250 354 aa19.39■□□□□ 0.69
CLDN7-207ENST00000574070 TOB1P50616 345 aaPredicted RBP19.39■□□□□ 0.69
CLDN7-207ENST00000574070 PSMC5P62195 406 aa19.39■□□□□ 0.69
CLDN7-207ENST00000574070 SHHQ15465 462 aa19.39■□□□□ 0.69
CLDN7-207ENST00000574070 TRIM71Q2Q1W2 868 aaKnown RBP19.39■□□□□ 0.69
CLDN7-207ENST00000574070 C9orf50Q5SZB4 431 aa19.39■□□□□ 0.69
CLDN7-207ENST00000574070 MTHFD1LQ6UB35 978 aa19.39■□□□□ 0.69
CLDN7-207ENST00000574070 RUFY4Q6ZNE9 571 aa19.39■□□□□ 0.69
CLDN7-207ENST00000574070 FERMT3Q86UX7 667 aa19.39■□□□□ 0.69
CLDN7-207ENST00000574070 DNAJB3Q8WWF6 145 aa19.39■□□□□ 0.69
CLDN7-207ENST00000574070 PCDHB6Q9Y5E3 794 aa19.39■□□□□ 0.69
CLDN7-207ENST00000574070 COL1A2P08123 1366 aa19.39■□□□□ 0.69
CLDN7-207ENST00000574070 MYH9P35579 1960 aaKnown RBP19.39■□□□□ 0.69
CLDN7-207ENST00000574070 DDX11L8A8MPP1 907 aa19.38■□□□□ 0.69
CLDN7-207ENST00000574070 RSPH10B2B2RC85 870 aa19.38■□□□□ 0.69
CLDN7-207ENST00000574070 ZNF862O60290 1169 aa19.38■□□□□ 0.69
CLDN7-207ENST00000574070 FGBP02675 491 aa19.38■□□□□ 0.69
CLDN7-207ENST00000574070 P4HBP07237 508 aaKnown RBP19.38■□□□□ 0.69
CLDN7-207ENST00000574070 RSPH10BP0C881 870 aa19.38■□□□□ 0.69
CLDN7-207ENST00000574070 KLRC1P26715 233 aa19.38■□□□□ 0.69
CLDN7-207ENST00000574070 TECP42680 631 aa19.38■□□□□ 0.69
CLDN7-207ENST00000574070 QARSP47897 775 aaKnown RBP19.38■□□□□ 0.69
CLDN7-207ENST00000574070 RBL2Q08999 1139 aa19.38■□□□□ 0.69
CLDN7-207ENST00000574070 TMEM266Q2M3C6 531 aa19.38■□□□□ 0.69
CLDN7-207ENST00000574070 MARCH8Q5T0T0 291 aa19.38■□□□□ 0.69
CLDN7-207ENST00000574070 ZNF365Q70YC5 407 aa19.38■□□□□ 0.69
CLDN7-207ENST00000574070 DYDC2Q96IM9 177 aa19.38■□□□□ 0.69
CLDN7-207ENST00000574070 RNPC3Q96LT9 517 aaKnown RBP19.38■□□□□ 0.69
CLDN7-207ENST00000574070 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.38■□□□□ 0.69
CLDN7-207ENST00000574070 MBLAC1A4D2B0 266 aaPredicted RBP19.37■□□□□ 0.69
CLDN7-207ENST00000574070 CAND2O75155 1236 aa19.37■□□□□ 0.69
CLDN7-207ENST00000574070 PARNO95453 639 aaKnown RBP19.37■□□□□ 0.69
CLDN7-207ENST00000574070 PFKMP08237 780 aa19.37■□□□□ 0.69
CLDN7-207ENST00000574070 CYP4A11Q02928 519 aa19.37■□□□□ 0.69
CLDN7-207ENST00000574070 CTTNQ14247 550 aaKnown RBP19.37■□□□□ 0.69
CLDN7-207ENST00000574070 MTERF2Q49AM1 385 aa19.37■□□□□ 0.69
CLDN7-207ENST00000574070 XKR3Q5GH77 459 aa19.37■□□□□ 0.69
CLDN7-207ENST00000574070 TMEM240Q5SV17 173 aa19.37■□□□□ 0.69
CLDN7-207ENST00000574070 BRAPQ7Z569 592 aa19.37■□□□□ 0.69
CLDN7-207ENST00000574070 METTL13Q8N6R0 699 aa19.37■□□□□ 0.69
CLDN7-207ENST00000574070 MAFAQ8NHW3 353 aaPredicted RBP19.37■□□□□ 0.69
CLDN7-207ENST00000574070 LXNQ9BS40 222 aa19.37■□□□□ 0.69
CLDN7-207ENST00000574070 RGL1Q9NZL6 768 aa19.37■□□□□ 0.69
CLDN7-207ENST00000574070 PCDHA2Q9Y5H9 948 aa19.37■□□□□ 0.69
CLDN7-207ENST00000574070 POTEMA6NI47 508 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms