RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.82■■□□□ 1.4
ABR-221ENST00000573559 RANBP2P49792 3224 aaKnown RBP23.81■■□□□ 1.4
ABR-221ENST00000573559 CTSHP09668 335 aa23.81■■□□□ 1.4
ABR-221ENST00000573559 PRKCEQ02156 737 aa23.81■■□□□ 1.4
ABR-221ENST00000573559 NBR1Q14596 966 aa23.81■■□□□ 1.4
ABR-221ENST00000573559 ZNF618Q5T7W0 954 aa23.81■■□□□ 1.4
ABR-221ENST00000573559 RUFY4Q6ZNE9 571 aa23.81■■□□□ 1.4
ABR-221ENST00000573559 RPUSD2Q8IZ73 545 aaKnown RBP23.81■■□□□ 1.4
ABR-221ENST00000573559 BBXQ8WY36 941 aaPredicted RBP23.81■■□□□ 1.4
ABR-221ENST00000573559 INTS4Q96HW7 963 aaKnown RBP23.81■■□□□ 1.4
ABR-221ENST00000573559 FAM167AQ96KS9 214 aa23.81■■□□□ 1.4
ABR-221ENST00000573559 RNPC3Q96LT9 517 aaKnown RBP23.81■■□□□ 1.4
ABR-221ENST00000573559 EML1O00423 815 aa23.8■■□□□ 1.4
ABR-221ENST00000573559 RFC2P35250 354 aa23.8■■□□□ 1.4
ABR-221ENST00000573559 TXKP42681 527 aa23.8■■□□□ 1.4
ABR-221ENST00000573559 TRAPPC10P48553 1259 aa23.8■■□□□ 1.4
ABR-221ENST00000573559 TMEM240Q5SV17 173 aa23.8■■□□□ 1.4
ABR-221ENST00000573559 MARCH8Q5T0T0 291 aa23.8■■□□□ 1.4
ABR-221ENST00000573559 ZNF365Q70YC5 407 aa23.8■■□□□ 1.4
ABR-221ENST00000573559 BANK1Q8NDB2 785 aa23.8■■□□□ 1.4
ABR-221ENST00000573559 TMEM60Q9H2L4 133 aa23.8■■□□□ 1.4
ABR-221ENST00000573559 PCDHA12Q9UN75 941 aa23.8■■□□□ 1.4
ABR-221ENST00000573559 COL1A2P08123 1366 aa23.79■■□□□ 1.4
ABR-221ENST00000573559 MBLAC1A4D2B0 266 aaPredicted RBP23.79■■□□□ 1.4
ABR-221ENST00000573559 VPS37CA5D8V6 355 aaPredicted RBP23.79■■□□□ 1.4
ABR-221ENST00000573559 ZNF862O60290 1169 aa23.79■■□□□ 1.4
ABR-221ENST00000573559 OATP04181 439 aa23.79■■□□□ 1.4
ABR-221ENST00000573559 PDCP20941 246 aa23.79■■□□□ 1.4
ABR-221ENST00000573559 ORC2Q13416 577 aaPredicted RBP23.79■■□□□ 1.4
ABR-221ENST00000573559 ZNF484Q5JVG2 852 aa23.79■■□□□ 1.4
ABR-221ENST00000573559 TAF2Q6P1X5 1199 aa23.79■■□□□ 1.4
ABR-221ENST00000573559 C16orf59Q7L2K0 433 aa23.79■■□□□ 1.4
ABR-221ENST00000573559 FTOQ9C0B1 505 aaKnown RBP eCLIP23.79■■□□□ 1.4
ABR-221ENST00000573559 FAM49AQ9H0Q0 323 aaPredicted RBP23.79■■□□□ 1.4
ABR-221ENST00000573559 TTC12Q9H892 705 aaPredicted RBP23.79■■□□□ 1.4
ABR-221ENST00000573559 CAND2O75155 1236 aa23.78■■□□□ 1.4
ABR-221ENST00000573559 HSP90AA1P07900 732 aaKnown RBP23.78■■□□□ 1.4
ABR-221ENST00000573559 PFKMP08237 780 aa23.78■■□□□ 1.4
ABR-221ENST00000573559 RSPH3Q86UC2 560 aa23.78■■□□□ 1.4
ABR-221ENST00000573559 DNAJB3Q8WWF6 145 aa23.78■■□□□ 1.4
ABR-221ENST00000573559 MTMR9Q96QG7 549 aa23.78■■□□□ 1.4
ABR-221ENST00000573559 NRBP2Q9NSY0 501 aa23.78■■□□□ 1.4
ABR-221ENST00000573559 RSPH10B2B2RC85 870 aa23.77■■□□□ 1.4
ABR-221ENST00000573559 FGBP02675 491 aa23.77■■□□□ 1.4
ABR-221ENST00000573559 OR52Z1P0C646 297 aa23.77■■□□□ 1.4
ABR-221ENST00000573559 RSPH10BP0C881 870 aa23.77■■□□□ 1.4
ABR-221ENST00000573559 SPIRE1Q08AE8 756 aa23.77■■□□□ 1.4
ABR-221ENST00000573559 TRAF7Q6Q0C0 670 aa23.77■■□□□ 1.4
ABR-221ENST00000573559 MTHFD1LQ6UB35 978 aa23.77■■□□□ 1.4
ABR-221ENST00000573559 OTOP2Q7RTS6 562 aa23.77■■□□□ 1.4
ABR-221ENST00000573559 SEPT9Q9UHD8 586 aaPredicted RBP23.77■■□□□ 1.4
ABR-221ENST00000573559 CEP131Q9UPN4 1083 aa23.77■■□□□ 1.4
ABR-221ENST00000573559 PCDHB6Q9Y5E3 794 aa23.77■■□□□ 1.4
ABR-221ENST00000573559 PARNO95453 639 aaKnown RBP23.76■■□□□ 1.39
ABR-221ENST00000573559 KLRC1P26715 233 aa23.76■■□□□ 1.39
ABR-221ENST00000573559 TOB1P50616 345 aaPredicted RBP23.76■■□□□ 1.39
ABR-221ENST00000573559 PSMC5P62195 406 aa23.76■■□□□ 1.39
ABR-221ENST00000573559 EPHA7Q15375 998 aa23.76■■□□□ 1.39
ABR-221ENST00000573559 TET1Q8NFU7 2136 aa23.76■■□□□ 1.39
ABR-221ENST00000573559 PCDHA2Q9Y5H9 948 aa23.76■■□□□ 1.39
ABR-221ENST00000573559 ZBBXA8MT70 800 aa23.75■■□□□ 1.39
ABR-221ENST00000573559 ZBTB42B2RXF5 422 aa23.75■■□□□ 1.39
ABR-221ENST00000573559 ACTN1P12814 892 aa23.75■■□□□ 1.39
ABR-221ENST00000573559 QARSP47897 775 aaKnown RBP23.75■■□□□ 1.39
ABR-221ENST00000573559 CYP4A11Q02928 519 aa23.75■■□□□ 1.39
ABR-221ENST00000573559 RILPL1Q5EBL4 403 aa23.75■■□□□ 1.39
ABR-221ENST00000573559 XKR3Q5GH77 459 aa23.75■■□□□ 1.39
ABR-221ENST00000573559 VWCEQ96DN2 955 aa23.75■■□□□ 1.39
ABR-221ENST00000573559 DYDC2Q96IM9 177 aa23.75■■□□□ 1.39
ABR-221ENST00000573559 LXNQ9BS40 222 aa23.75■■□□□ 1.39
ABR-221ENST00000573559 MTIF3Q9H2K0 278 aaKnown RBP23.75■■□□□ 1.39
ABR-221ENST00000573559 EVPLQ92817 2033 aa23.75■■□□□ 1.39
ABR-221ENST00000573559 POTEMA6NI47 508 aa23.74■■□□□ 1.39
ABR-221ENST00000573559 DKC1O60832 514 aaKnown RBP eCLIP23.74■■□□□ 1.39
ABR-221ENST00000573559 NBNO60934 754 aa23.74■■□□□ 1.39
ABR-221ENST00000573559 P4HBP07237 508 aaKnown RBP23.74■■□□□ 1.39
ABR-221ENST00000573559 MBTPS1Q14703 1052 aa23.74■■□□□ 1.39
ABR-221ENST00000573559 LRIT3Q3SXY7 679 aa23.74■■□□□ 1.39
ABR-221ENST00000573559 MTERF2Q49AM1 385 aa23.74■■□□□ 1.39
ABR-221ENST00000573559 FERMT3Q86UX7 667 aa23.74■■□□□ 1.39
ABR-221ENST00000573559 RGL1Q9NZL6 768 aa23.74■■□□□ 1.39
ABR-221ENST00000573559 SIP14410 1827 aa23.74■■□□□ 1.39
ABR-221ENST00000573559 SMIM35A0A1B0GVV1 85 aa23.73■■□□□ 1.39
ABR-221ENST00000573559 TMEM150BA6NC51 233 aa23.73■■□□□ 1.39
ABR-221ENST00000573559 DDX11L8A8MPP1 907 aa23.73■■□□□ 1.39
ABR-221ENST00000573559 RBAK-RBAKDNI3L0D1 243 aa23.73■■□□□ 1.39
ABR-221ENST00000573559 C22orf31O95567 290 aa23.73■■□□□ 1.39
ABR-221ENST00000573559 RPLP2P05387 115 aaKnown RBP23.73■■□□□ 1.39
ABR-221ENST00000573559 SYT1P21579 422 aa23.73■■□□□ 1.39
ABR-221ENST00000573559 TECP42680 631 aa23.73■■□□□ 1.39
ABR-221ENST00000573559 TMEM62Q0P6H9 643 aa23.73■■□□□ 1.39
ABR-221ENST00000573559 CTTNQ14247 550 aaKnown RBP23.73■■□□□ 1.39
ABR-221ENST00000573559 GPNMBQ14956 572 aa23.73■■□□□ 1.39
ABR-221ENST00000573559 TMEM266Q2M3C6 531 aa23.73■■□□□ 1.39
ABR-221ENST00000573559 RPAINQ86UA6 219 aa23.73■■□□□ 1.39
ABR-221ENST00000573559 METTL13Q8N6R0 699 aa23.73■■□□□ 1.39
ABR-221ENST00000573559 HERVK_113Q902F9 699 aa23.73■■□□□ 1.39
ABR-221ENST00000573559 EIF2AK1Q9BQI3 630 aaKnown RBP23.73■■□□□ 1.39
ABR-221ENST00000573559 M0QZ92 97 aa23.72■■□□□ 1.39
ABR-221ENST00000573559 SOX1O00570 391 aaPredicted RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms