RNA–Protein interactions for RNA: ENST00000573502.1

CDC27-214, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-214ENST00000573502 SKIDA1Q1XH10 827 aa6.4□□□□□ -1.38
CDC27-214ENST00000573502 VWA3BQ502W6 1294 aa6.4□□□□□ -1.38
CDC27-214ENST00000573502 PRPF38AQ8NAV1 312 aaKnown RBP6.4□□□□□ -1.38
CDC27-214ENST00000573502 FNIP1Q8TF40 1166 aa6.4□□□□□ -1.38
CDC27-214ENST00000573502 GBP4Q96PP9 640 aa6.4□□□□□ -1.38
CDC27-214ENST00000573502 PPP1R16BQ96T49 567 aa6.4□□□□□ -1.38
CDC27-214ENST00000573502 AMNQ9BXJ7 453 aa6.4□□□□□ -1.38
CDC27-214ENST00000573502 MS4A5Q9H3V2 200 aa6.4□□□□□ -1.38
CDC27-214ENST00000573502 PCIF1Q9H4Z3 704 aa6.4□□□□□ -1.38
CDC27-214ENST00000573502 FAN1Q9Y2M0 1017 aa6.4□□□□□ -1.38
CDC27-214ENST00000573502 ASB1Q9Y576 335 aa6.4□□□□□ -1.38
CDC27-214ENST00000573502 PHLDB1Q86UU1 1377 aa6.4□□□□□ -1.39
CDC27-214ENST00000573502 GOLGA6L22H0YM25 854 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 CYP17A1P05093 508 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 PTGS1P23219 599 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 OCRLQ01968 901 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 SART3Q15020 963 aaKnown RBP6.39□□□□□ -1.39
CDC27-214ENST00000573502 EPHA7Q15375 998 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 TERF2Q15554 542 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 ATP13A4Q4VNC1 1196 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 PRR31Q5SQ13 230 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 GPR158Q5T848 1215 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 VASNQ6EMK4 673 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 KYQ8NBH2 561 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 TMEM209Q96SK2 561 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 PCDH18Q9HCL0 1135 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 DLL4Q9NR61 685 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 TOMM22Q9NS69 142 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 SPATA6Q9NWH7 488 aaPredicted RBP6.39□□□□□ -1.39
CDC27-214ENST00000573502 KCTD3Q9Y597 815 aa6.39□□□□□ -1.39
CDC27-214ENST00000573502 LCHNA4D1U4 455 aa6.38□□□□□ -1.39
CDC27-214ENST00000573502 TCAF2A6NFQ2 919 aa6.38□□□□□ -1.39
CDC27-214ENST00000573502 NFIBO00712 420 aa6.38□□□□□ -1.39
CDC27-214ENST00000573502 ENO2P09104 434 aaPredicted RBP6.38□□□□□ -1.39
CDC27-214ENST00000573502 COL6A1P12109 1028 aa6.38□□□□□ -1.39
CDC27-214ENST00000573502 LINC00310P59036 64 aa6.38□□□□□ -1.39
CDC27-214ENST00000573502 LRRC32Q14392 662 aa6.38□□□□□ -1.39
CDC27-214ENST00000573502 PHF19Q5T6S3 580 aa6.38□□□□□ -1.39
CDC27-214ENST00000573502 CLRN3Q8NCR9 226 aa6.38□□□□□ -1.39
CDC27-214ENST00000573502 WDR66Q8TBY9 1149 aa6.38□□□□□ -1.39
CDC27-214ENST00000573502 IGDCC4Q8TDY8 1250 aa6.38□□□□□ -1.39
CDC27-214ENST00000573502 SLC5A5Q92911 643 aa6.38□□□□□ -1.39
CDC27-214ENST00000573502 DACT3Q96B18 629 aaPredicted RBP6.38□□□□□ -1.39
CDC27-214ENST00000573502 ZSWIM3Q96MP5 696 aa6.38□□□□□ -1.39
CDC27-214ENST00000573502 VTA1Q9NP79 307 aa6.38□□□□□ -1.39
CDC27-214ENST00000573502 MCM8Q9UJA3 840 aa6.38□□□□□ -1.39
CDC27-214ENST00000573502 PMF1-BGLAPU3KQ54 211 aa6.38□□□□□ -1.39
CDC27-214ENST00000573502 EVA1CP58658 441 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 CAP1Q01518 475 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 SMAD4Q13485 552 aaKnown RBP6.37□□□□□ -1.39
CDC27-214ENST00000573502 KCNA10Q16322 511 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 BROXQ5VW32 411 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 CNKSR3Q6P9H4 555 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 LRSAM1Q6UWE0 723 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 SAPCD2Q86UD0 394 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 ATL2Q8NHH9 583 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 COG1Q8WTW3 980 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 ZBTB8AQ96BR9 441 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 KRTAP4-12Q9BQ66 201 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 TRIM8Q9BZR9 551 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 SEMA4AQ9H3S1 761 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 KCND1Q9NSA2 647 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 UCKL1Q9NWZ5 548 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 ARHGAP28Q9P2N2 729 aa6.37□□□□□ -1.39
CDC27-214ENST00000573502 PRAMEF22A3QJZ6 481 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 NPIPB6E9PJ23 425 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 RAB11FIP3O75154 756 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 PRLP01236 227 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 C8AP07357 584 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 CPEP16870 476 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 TMPRSS15P98073 1019 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 ALDH6A1Q02252 535 aaKnown RBP6.36□□□□□ -1.39
CDC27-214ENST00000573502 ZNF124Q15973 351 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 DDB1Q16531 1140 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 LCE3BQ5TA77 95 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 PRAMEF18Q5VWM3 479 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 RNF219Q5W0B1 726 aaPredicted RBP6.36□□□□□ -1.39
CDC27-214ENST00000573502 C11orf74Q86VG3 221 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 SPATS2Q86XZ4 545 aaKnown RBP6.36□□□□□ -1.39
CDC27-214ENST00000573502 TTLL6Q8N841 843 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 ZNF610Q8N9Z0 462 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 HIPK4Q8NE63 616 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 ZCCHC14Q8WYQ9 949 aaKnown RBP6.36□□□□□ -1.39
CDC27-214ENST00000573502 RTF1Q92541 710 aaKnown RBP6.36□□□□□ -1.39
CDC27-214ENST00000573502 ERCC4Q92889 916 aaPredicted RBP6.36□□□□□ -1.39
CDC27-214ENST00000573502 PWWP2AQ96N64 755 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 SLC38A3Q99624 504 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 FOXB1Q99853 325 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 INCENPQ9NQS7 918 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 ZFP69BQ9UJL9 534 aa6.36□□□□□ -1.39
CDC27-214ENST00000573502 CNOT6Q9ULM6 557 aaKnown RBP6.36□□□□□ -1.39
CDC27-214ENST00000573502 FFAR3O14843 346 aa6.35□□□□□ -1.39
CDC27-214ENST00000573502 PRKD3O94806 890 aa6.35□□□□□ -1.39
CDC27-214ENST00000573502 MLLT6P55198 1093 aaPredicted RBP6.35□□□□□ -1.39
CDC27-214ENST00000573502 IL13RA1P78552 427 aa6.35□□□□□ -1.39
CDC27-214ENST00000573502 MOGSQ13724 837 aa6.35□□□□□ -1.39
CDC27-214ENST00000573502 MYBPC3Q14896 1274 aa6.35□□□□□ -1.39
CDC27-214ENST00000573502 STILQ15468 1287 aa6.35□□□□□ -1.39
CDC27-214ENST00000573502 KANK2Q63ZY3 851 aa6.35□□□□□ -1.39
CDC27-214ENST00000573502 NECAB2Q7Z6G3 386 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms