RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 TBX2Q13207 712 aaPredicted RBP22.76■■□□□ 1.23
CHRNE-202ENST00000572438 ZCWPW2Q504Y3 356 aa22.76■■□□□ 1.23
CHRNE-202ENST00000572438 CST9Q5W186 159 aa22.76■■□□□ 1.23
CHRNE-202ENST00000572438 VPS16Q9H269 839 aa22.76■■□□□ 1.23
CHRNE-202ENST00000572438 OLFML3Q9NRN5 406 aa22.76■■□□□ 1.23
CHRNE-202ENST00000572438 SLC9A2Q9UBY0 812 aa22.76■■□□□ 1.23
CHRNE-202ENST00000572438 DNAJC25-GNG10A0A024R161 153 aa22.75■■□□□ 1.23
CHRNE-202ENST00000572438 ITGBL1O95965 494 aaPredicted RBP22.75■■□□□ 1.23
CHRNE-202ENST00000572438 PGK2P07205 417 aa22.75■■□□□ 1.23
CHRNE-202ENST00000572438 SFPQP23246 707 aaKnown RBP eCLIP22.75■■□□□ 1.23
CHRNE-202ENST00000572438 YY1P25490 414 aa22.75■■□□□ 1.23
CHRNE-202ENST00000572438 YWHABP31946 246 aaKnown RBP22.75■■□□□ 1.23
CHRNE-202ENST00000572438 ZNF131P52739 623 aa22.75■■□□□ 1.23
CHRNE-202ENST00000572438 CHADLQ6NUI6 762 aa22.75■■□□□ 1.23
CHRNE-202ENST00000572438 PADI6Q6TGC4 694 aa22.75■■□□□ 1.23
CHRNE-202ENST00000572438 EPM2AIP1Q7L775 607 aaPredicted RBP22.75■■□□□ 1.23
CHRNE-202ENST00000572438 GPRC5AQ8NFJ5 357 aa22.75■■□□□ 1.23
CHRNE-202ENST00000572438 KIAA1524Q8TCG1 905 aa22.75■■□□□ 1.23
CHRNE-202ENST00000572438 CNOT6LQ96LI5 555 aaKnown RBP22.75■■□□□ 1.23
CHRNE-202ENST00000572438 MPHOSPH6Q99547 160 aaKnown RBP22.75■■□□□ 1.23
CHRNE-202ENST00000572438 BCAS3Q9H6U6 928 aa22.75■■□□□ 1.23
CHRNE-202ENST00000572438 RARRES1P49788 294 aa22.75■■□□□ 1.23
CHRNE-202ENST00000572438 CASP5P51878 434 aa22.75■■□□□ 1.23
CHRNE-202ENST00000572438 CCNA1P78396 465 aa22.75■■□□□ 1.23
CHRNE-202ENST00000572438 SEPT14Q6ZU15 432 aa22.75■■□□□ 1.23
CHRNE-202ENST00000572438 MRPL44Q9H9J2 332 aaKnown RBP22.75■■□□□ 1.23
CHRNE-202ENST00000572438 PARVGQ9HBI0 331 aa22.75■■□□□ 1.23
CHRNE-202ENST00000572438 PSAPP07602 524 aa22.74■■□□□ 1.23
CHRNE-202ENST00000572438 SP2Q02086 613 aa22.74■■□□□ 1.23
CHRNE-202ENST00000572438 WDR78Q5VTH9 848 aa22.74■■□□□ 1.23
CHRNE-202ENST00000572438 LRRC55Q6ZSA7 311 aa22.74■■□□□ 1.23
CHRNE-202ENST00000572438 NELFCDQ8IXH7 590 aa22.74■■□□□ 1.23
CHRNE-202ENST00000572438 MYCT1Q8N699 235 aa22.74■■□□□ 1.23
CHRNE-202ENST00000572438 EEF2KMTQ96G04 330 aa22.74■■□□□ 1.23
CHRNE-202ENST00000572438 FGD4Q96M96 766 aa22.74■■□□□ 1.23
CHRNE-202ENST00000572438 KCTD10Q9H3F6 313 aa22.74■■□□□ 1.23
CHRNE-202ENST00000572438 POLD4Q9HCU8 107 aa22.74■■□□□ 1.23
CHRNE-202ENST00000572438 SEL1LQ9UBV2 794 aa22.74■■□□□ 1.23
CHRNE-202ENST00000572438 GCLCP48506 637 aaPredicted RBP22.73■■□□□ 1.23
CHRNE-202ENST00000572438 ACTR2P61160 394 aa22.73■■□□□ 1.23
CHRNE-202ENST00000572438 CCZ1BP86790 482 aa22.73■■□□□ 1.23
CHRNE-202ENST00000572438 CCZ1P86791 482 aaPredicted RBP22.73■■□□□ 1.23
CHRNE-202ENST00000572438 BMT2Q1RMZ1 405 aa22.73■■□□□ 1.23
CHRNE-202ENST00000572438 CCDC43Q96MW1 224 aaKnown RBP22.73■■□□□ 1.23
CHRNE-202ENST00000572438 TUBGCP2Q9BSJ2 902 aa22.73■■□□□ 1.23
CHRNE-202ENST00000572438 PORCNQ9H237 461 aa22.73■■□□□ 1.23
CHRNE-202ENST00000572438 ANKEF1Q9NU02 776 aa22.73■■□□□ 1.23
CHRNE-202ENST00000572438 ITIH6Q6UXX5 1313 aa22.73■■□□□ 1.23
CHRNE-202ENST00000572438 LOXHD1Q8IVV2 1947 aa22.73■■□□□ 1.23
CHRNE-202ENST00000572438 SFI1A8K8P3 1242 aa22.73■■□□□ 1.23
CHRNE-202ENST00000572438 LGALS16A8MUM7 142 aa22.73■■□□□ 1.23
CHRNE-202ENST00000572438 DKC1O60832 514 aaKnown RBP eCLIP22.73■■□□□ 1.23
CHRNE-202ENST00000572438 MYBP10242 640 aa22.73■■□□□ 1.23
CHRNE-202ENST00000572438 FKBP3Q00688 224 aaKnown RBP22.73■■□□□ 1.23
CHRNE-202ENST00000572438 ATP6V0A1Q93050 837 aa22.73■■□□□ 1.23
CHRNE-202ENST00000572438 EFCC1Q9HA90 598 aa22.73■■□□□ 1.23
CHRNE-202ENST00000572438 GPBP1L1Q9HC44 474 aaPredicted RBP22.73■■□□□ 1.23
CHRNE-202ENST00000572438 GABBR1Q9UBS5 961 aa22.73■■□□□ 1.23
CHRNE-202ENST00000572438 KIAA1217Q5T5P2 1943 aa22.72■■□□□ 1.23
CHRNE-202ENST00000572438 HIP1RO75146 1068 aa22.72■■□□□ 1.23
CHRNE-202ENST00000572438 TPM2P07951 284 aa22.72■■□□□ 1.23
CHRNE-202ENST00000572438 SKILP12757 684 aa22.72■■□□□ 1.23
CHRNE-202ENST00000572438 HUNKP57058 714 aa22.72■■□□□ 1.23
CHRNE-202ENST00000572438 ABHD15Q6UXT9 468 aa22.72■■□□□ 1.23
CHRNE-202ENST00000572438 PPP4R3CPQ6ZMV5 832 aa22.72■■□□□ 1.23
CHRNE-202ENST00000572438 ANKRD13CQ8N6S4 541 aa22.72■■□□□ 1.23
CHRNE-202ENST00000572438 MTIF2P46199 727 aaKnown RBP22.71■■□□□ 1.23
CHRNE-202ENST00000572438 SP4Q02446 784 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 MAPK7Q13164 816 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 KNOP1Q1ED39 458 aaKnown RBP22.71■■□□□ 1.23
CHRNE-202ENST00000572438 MIS18BP1Q6P0N0 1132 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 CYFIP1Q7L576 1253 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 ZNF507Q8TCN5 953 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 PARK7Q99497 189 aaKnown RBP22.71■■□□□ 1.23
CHRNE-202ENST00000572438 MORF4L1Q9UBU8 362 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 TELO2Q9Y4R8 837 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 LOC102724159A0A0B4J2E5 919 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 EIF3DO15371 548 aaKnown RBP eCLIP22.71■■□□□ 1.23
CHRNE-202ENST00000572438 GCNT3O95395 438 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 TGFB3P10600 412 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 PRKCSHP14314 528 aaPredicted RBP22.71■■□□□ 1.23
CHRNE-202ENST00000572438 UBA1P22314 1058 aaKnown RBP22.71■■□□□ 1.23
CHRNE-202ENST00000572438 UBXN1Q04323 297 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 PWP2Q15269 919 aaKnown RBP22.71■■□□□ 1.23
CHRNE-202ENST00000572438 EDRF1Q3B7T1 1238 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 UTP14CQ5TAP6 766 aaKnown RBP22.71■■□□□ 1.23
CHRNE-202ENST00000572438 SWSAP1Q6NVH7 229 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 DAW1Q8N136 415 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 CEP63Q96MT8 703 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 TIPINQ9BVW5 301 aa22.71■■□□□ 1.23
CHRNE-202ENST00000572438 BACH1O14867 736 aa22.7■■□□□ 1.22
CHRNE-202ENST00000572438 SORBS3O60504 671 aa22.7■■□□□ 1.22
CHRNE-202ENST00000572438 PRPF6O94906 941 aaKnown RBP22.7■■□□□ 1.22
CHRNE-202ENST00000572438 SUPT20HL2P0C7V6 817 aa22.7■■□□□ 1.22
CHRNE-202ENST00000572438 HOXD13P35453 343 aa22.7■■□□□ 1.22
CHRNE-202ENST00000572438 XKR9Q5GH70 373 aa22.7■■□□□ 1.22
CHRNE-202ENST00000572438 ZC3H3Q8IXZ2 948 aaKnown RBP22.7■■□□□ 1.22
CHRNE-202ENST00000572438 FIZ1Q96SL8 496 aa22.7■■□□□ 1.22
CHRNE-202ENST00000572438 PTPN18Q99952 460 aa22.7■■□□□ 1.22
CHRNE-202ENST00000572438 TRAF3IP3Q9Y228 551 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms