RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 GDF6Q6KF10 455 aaPredicted RBP8.8□□□□□ -1
SMG6-211ENST00000572369 MFSD5Q6N075 450 aa8.8□□□□□ -1
SMG6-211ENST00000572369 MIS18BP1Q6P0N0 1132 aa8.8□□□□□ -1
SMG6-211ENST00000572369 DIS3L2Q8IYB7 885 aaKnown RBP8.8□□□□□ -1
SMG6-211ENST00000572369 OXER1Q8TDS5 423 aa8.8□□□□□ -1
SMG6-211ENST00000572369 CRYGNQ8WXF5 182 aa8.8□□□□□ -1
SMG6-211ENST00000572369 TNPO1Q92973 898 aaKnown RBP8.8□□□□□ -1
SMG6-211ENST00000572369 ATP6V0A1Q93050 837 aa8.8□□□□□ -1
SMG6-211ENST00000572369 NAP1L4Q99733 375 aaKnown RBP8.8□□□□□ -1
SMG6-211ENST00000572369 TEKT3Q9BXF9 490 aa8.8□□□□□ -1
SMG6-211ENST00000572369 SMARCAD1Q9H4L7 1026 aa8.8□□□□□ -1
SMG6-211ENST00000572369 FAM86C1Q9NVL1 165 aa8.8□□□□□ -1
SMG6-211ENST00000572369 ERAP1Q9NZ08 941 aa8.8□□□□□ -1
SMG6-211ENST00000572369 DDX25Q9UHL0 483 aaKnown RBP8.8□□□□□ -1
SMG6-211ENST00000572369 TBX21Q9UL17 535 aa8.8□□□□□ -1
SMG6-211ENST00000572369 TRPC6Q9Y210 931 aa8.8□□□□□ -1
SMG6-211ENST00000572369 TRIP12Q14669 1992 aaPredicted RBP8.8□□□□□ -1
SMG6-211ENST00000572369 GRXCR1A8MXD5 290 aa8.79□□□□□ -1
SMG6-211ENST00000572369 BTBD18B2RXH4 712 aa8.79□□□□□ -1
SMG6-211ENST00000572369 HAS3O00219 553 aa8.79□□□□□ -1
SMG6-211ENST00000572369 MSH4O15457 936 aa8.79□□□□□ -1
SMG6-211ENST00000572369 DCXO43602 365 aa8.79□□□□□ -1
SMG6-211ENST00000572369 CHMP2AO43633 222 aa8.79□□□□□ -1
SMG6-211ENST00000572369 CD2BP2O95400 341 aaKnown RBP8.79□□□□□ -1
SMG6-211ENST00000572369 BAG4O95429 457 aaKnown RBP8.79□□□□□ -1
SMG6-211ENST00000572369 PSAPP07602 524 aa8.79□□□□□ -1
SMG6-211ENST00000572369 SMIM10L2AP0DMW4 78 aa8.79□□□□□ -1
SMG6-211ENST00000572369 SMIM10L2BP0DMW5 78 aa8.79□□□□□ -1
SMG6-211ENST00000572369 CSF2RAP15509 400 aa8.79□□□□□ -1
SMG6-211ENST00000572369 GCFC2P16383 781 aaKnown RBP8.79□□□□□ -1
SMG6-211ENST00000572369 STAT5BP51692 787 aa8.79□□□□□ -1
SMG6-211ENST00000572369 KRT76Q01546 638 aa8.79□□□□□ -1
SMG6-211ENST00000572369 TCF15Q12870 199 aa8.79□□□□□ -1
SMG6-211ENST00000572369 NPY5RQ15761 445 aa8.79□□□□□ -1
SMG6-211ENST00000572369 Q4G0T1 1027 aa8.79□□□□□ -1
SMG6-211ENST00000572369 TRMT1LQ7Z2T5 733 aaKnown RBP8.79□□□□□ -1
SMG6-211ENST00000572369 SESTD1Q86VW0 696 aa8.79□□□□□ -1
SMG6-211ENST00000572369 CKAP2LQ8IYA6 745 aa8.79□□□□□ -1
SMG6-211ENST00000572369 HLA-CQ95604 372 aa8.79□□□□□ -1
SMG6-211ENST00000572369 NOC4LQ9BVI4 516 aaKnown RBP8.79□□□□□ -1
SMG6-211ENST00000572369 ZNF302Q9NR11 478 aa8.79□□□□□ -1
SMG6-211ENST00000572369 SETD4Q9NVD3 440 aa8.79□□□□□ -1
SMG6-211ENST00000572369 SMC3Q9UQE7 1217 aa8.79□□□□□ -1
SMG6-211ENST00000572369 TELO2Q9Y4R8 837 aa8.79□□□□□ -1
SMG6-211ENST00000572369 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.79□□□□□ -1
SMG6-211ENST00000572369 WDR81Q562E7 1941 aa8.79□□□□□ -1
SMG6-211ENST00000572369 TANC1Q9C0D5 1861 aa8.79□□□□□ -1
SMG6-211ENST00000572369 UMODL1Q5DID0 1318 aa8.79□□□□□ -1
SMG6-211ENST00000572369 EMSYQ7Z589 1322 aa8.79□□□□□ -1
SMG6-211ENST00000572369 ACACBO00763 2458 aa8.78□□□□□ -1
SMG6-211ENST00000572369 TRIOO75962 3097 aa8.78□□□□□ -1
SMG6-211ENST00000572369 H3BQV1 296 aa8.78□□□□□ -1
SMG6-211ENST00000572369 ATP2B1P20020 1258 aa8.78□□□□□ -1
SMG6-211ENST00000572369 GJB2P29033 226 aa8.78□□□□□ -1
SMG6-211ENST00000572369 SSTR3P32745 418 aaPredicted RBP8.78□□□□□ -1
SMG6-211ENST00000572369 IGBP1P78318 339 aa8.78□□□□□ -1
SMG6-211ENST00000572369 ZNF200P98182 395 aaPredicted RBP8.78□□□□□ -1
SMG6-211ENST00000572369 PPFIA1Q13136 1202 aa8.78□□□□□ -1
SMG6-211ENST00000572369 PTK7Q13308 1070 aa8.78□□□□□ -1
SMG6-211ENST00000572369 MCTP1Q6DN14 999 aa8.78□□□□□ -1
SMG6-211ENST00000572369 ZNF746Q6NUN9 644 aaPredicted RBP8.78□□□□□ -1
SMG6-211ENST00000572369 SWSAP1Q6NVH7 229 aa8.78□□□□□ -1
SMG6-211ENST00000572369 PDXDC2PQ6P474 469 aa8.78□□□□□ -1
SMG6-211ENST00000572369 MOXD1Q6UVY6 613 aa8.78□□□□□ -1
SMG6-211ENST00000572369 MIER3Q7Z3K6 550 aa8.78□□□□□ -1
SMG6-211ENST00000572369 SMAP1Q8IYB5 467 aaPredicted RBP8.78□□□□□ -1
SMG6-211ENST00000572369 RPUSD2Q8IZ73 545 aaKnown RBP8.78□□□□□ -1
SMG6-211ENST00000572369 CAGE1Q8TC20 777 aa8.78□□□□□ -1
SMG6-211ENST00000572369 SCLYQ96I15 445 aa8.78□□□□□ -1
SMG6-211ENST00000572369 RIT2Q99578 217 aa8.78□□□□□ -1
SMG6-211ENST00000572369 PRRX2Q99811 253 aa8.78□□□□□ -1
SMG6-211ENST00000572369 FTOQ9C0B1 505 aaKnown RBP eCLIP8.78□□□□□ -1
SMG6-211ENST00000572369 RNPEPQ9H4A4 650 aa8.78□□□□□ -1
SMG6-211ENST00000572369 PCDHA10Q9Y5I2 948 aa8.78□□□□□ -1
SMG6-211ENST00000572369 TPRP12270 2363 aaKnown RBP8.78□□□□□ -1
SMG6-211ENST00000572369 SCN5AQ14524 2016 aa8.78□□□□□ -1
SMG6-211ENST00000572369 NRCAMQ92823 1304 aa8.78□□□□□ -1
SMG6-211ENST00000572369 MYO9BQ13459 2157 aa8.78□□□□□ -1
SMG6-211ENST00000572369 CYP3A7-CYP3A51PA0A087WV96 503 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 POTEB3A0JP26 581 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 FAM205CA6NFA0 338 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 WDR64B1ANS9 1081 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 PITPNM1O00562 1244 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 DHX15O43143 795 aaKnown RBP8.77□□□□□ -1.01
SMG6-211ENST00000572369 TREHO43280 583 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 SLC37A4O43826 429 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 LGR5O75473 907 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 ATG7O95352 703 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 CCNE2O96020 404 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 FGBP02675 491 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 ACRP10323 421 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 CYP3A7P24462 503 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 SFNP31947 248 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 THPOP40225 353 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 SLC26A2P50443 739 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 JAK3P52333 1124 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 RAB30Q15771 203 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 GRIK4Q16099 956 aa8.77□□□□□ -1.01
SMG6-211ENST00000572369 EARS2Q5JPH6 523 aaKnown RBP8.77□□□□□ -1.01
SMG6-211ENST00000572369 IER5LQ5T953 404 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms