RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 TRPC6Q9Y210 931 aa22.79■■□□□ 1.24
CCDC40-206ENST00000572083 DMDP11532 3685 aa22.79■■□□□ 1.24
CCDC40-206ENST00000572083 RRN3P2A6NIE6 340 aa22.78■■□□□ 1.24
CCDC40-206ENST00000572083 FBXL6Q8N531 539 aa22.78■■□□□ 1.24
CCDC40-206ENST00000572083 CTCFLQ8NI51 663 aaPredicted RBP22.78■■□□□ 1.24
CCDC40-206ENST00000572083 FAM86C1Q9NVL1 165 aa22.78■■□□□ 1.24
CCDC40-206ENST00000572083 LRFN2Q9ULH4 789 aa22.78■■□□□ 1.24
CCDC40-206ENST00000572083 SQORQ9Y6N5 450 aa22.78■■□□□ 1.24
CCDC40-206ENST00000572083 ZDBF2Q9HCK1 2354 aa22.78■■□□□ 1.24
CCDC40-206ENST00000572083 IGSF9BQ9UPX0 1349 aa22.78■■□□□ 1.24
CCDC40-206ENST00000572083 PER2O15055 1255 aa22.77■■□□□ 1.24
CCDC40-206ENST00000572083 PLEKHA8P1O95397 391 aa22.77■■□□□ 1.24
CCDC40-206ENST00000572083 RPLP2P05387 115 aaKnown RBP22.77■■□□□ 1.24
CCDC40-206ENST00000572083 TMEM266Q2M3C6 531 aa22.77■■□□□ 1.24
CCDC40-206ENST00000572083 ZNF654Q8IZM8 581 aa22.77■■□□□ 1.24
CCDC40-206ENST00000572083 IGDCC4Q8TDY8 1250 aa22.77■■□□□ 1.24
CCDC40-206ENST00000572083 PHF7Q9BWX1 381 aaPredicted RBP22.77■■□□□ 1.24
CCDC40-206ENST00000572083 TMX1Q9H3N1 280 aa22.77■■□□□ 1.24
CCDC40-206ENST00000572083 TLE6Q9H808 572 aa22.77■■□□□ 1.24
CCDC40-206ENST00000572083 UBIAD1Q9Y5Z9 338 aa22.77■■□□□ 1.24
CCDC40-206ENST00000572083 GSPT1P15170 499 aaKnown RBP22.76■■□□□ 1.23
CCDC40-206ENST00000572083 PKN1Q16512 942 aa22.76■■□□□ 1.23
CCDC40-206ENST00000572083 CMTR1Q8N1G2 835 aaKnown RBP22.76■■□□□ 1.23
CCDC40-206ENST00000572083 VN1R2Q8NFZ6 395 aa22.76■■□□□ 1.23
CCDC40-206ENST00000572083 MICAL1Q8TDZ2 1067 aa22.76■■□□□ 1.23
CCDC40-206ENST00000572083 PRRX2Q99811 253 aa22.76■■□□□ 1.23
CCDC40-206ENST00000572083 PSTPIP2Q9H939 334 aa22.76■■□□□ 1.23
CCDC40-206ENST00000572083 LY9Q9HBG7 655 aa22.76■■□□□ 1.23
CCDC40-206ENST00000572083 JPH1Q9HDC5 661 aaPredicted RBP22.76■■□□□ 1.23
CCDC40-206ENST00000572083 DDAH1O94760 285 aa22.75■■□□□ 1.23
CCDC40-206ENST00000572083 KIF5BP33176 963 aa22.75■■□□□ 1.23
CCDC40-206ENST00000572083 VCPP55072 806 aaKnown RBP22.75■■□□□ 1.23
CCDC40-206ENST00000572083 SIGLEC14Q08ET2 396 aa22.75■■□□□ 1.23
CCDC40-206ENST00000572083 SPOUT1Q5T280 376 aaKnown RBP22.75■■□□□ 1.23
CCDC40-206ENST00000572083 CELF4Q9BZC1 486 aaKnown RBP22.75■■□□□ 1.23
CCDC40-206ENST00000572083 AZI2Q9H6S1 392 aa22.75■■□□□ 1.23
CCDC40-206ENST00000572083 HCSTQ9UBK5 93 aa22.75■■□□□ 1.23
CCDC40-206ENST00000572083 SLC9A2Q9UBY0 812 aa22.75■■□□□ 1.23
CCDC40-206ENST00000572083 hCG_1642624A0A1W2PR95 340 aa22.74■■□□□ 1.23
CCDC40-206ENST00000572083 SPDYE3A6NKU9 549 aa22.74■■□□□ 1.23
CCDC40-206ENST00000572083 ST18O60284 1047 aa22.74■■□□□ 1.23
CCDC40-206ENST00000572083 AAMPQ13685 434 aa22.74■■□□□ 1.23
CCDC40-206ENST00000572083 PLCB4Q15147 1175 aa22.74■■□□□ 1.23
CCDC40-206ENST00000572083 MB21D2Q8IYB1 491 aaPredicted RBP22.74■■□□□ 1.23
CCDC40-206ENST00000572083 SRBD1Q8N5C6 995 aaKnown RBP22.74■■□□□ 1.23
CCDC40-206ENST00000572083 MAP3K14Q99558 947 aa22.74■■□□□ 1.23
CCDC40-206ENST00000572083 JADE2Q9NQC1 790 aa22.74■■□□□ 1.23
CCDC40-206ENST00000572083 TLR9Q9NR96 1032 aa22.74■■□□□ 1.23
CCDC40-206ENST00000572083 PCDHA2Q9Y5H9 948 aa22.74■■□□□ 1.23
CCDC40-206ENST00000572083 FNDC1Q4ZHG4 1894 aaPredicted RBP22.73■■□□□ 1.23
CCDC40-206ENST00000572083 MGEA5O60502 916 aa22.73■■□□□ 1.23
CCDC40-206ENST00000572083 RXRAP19793 462 aa22.73■■□□□ 1.23
CCDC40-206ENST00000572083 SARSP49591 514 aaKnown RBP22.73■■□□□ 1.23
CCDC40-206ENST00000572083 NFX1Q12986 1120 aaKnown RBP22.73■■□□□ 1.23
CCDC40-206ENST00000572083 ASIC4Q96FT7 647 aa22.73■■□□□ 1.23
CCDC40-206ENST00000572083 PCDHA6Q9UN73 950 aa22.73■■□□□ 1.23
CCDC40-206ENST00000572083 GINS2Q9Y248 185 aa22.73■■□□□ 1.23
CCDC40-206ENST00000572083 PCDHB7Q9Y5E2 793 aa22.73■■□□□ 1.23
CCDC40-206ENST00000572083 PCDHB12Q9Y5F1 795 aa22.73■■□□□ 1.23
CCDC40-206ENST00000572083 PCDHA8Q9Y5H6 950 aa22.73■■□□□ 1.23
CCDC40-206ENST00000572083 TBKBP1A7MCY6 615 aa22.72■■□□□ 1.23
CCDC40-206ENST00000572083 FGF18O76093 207 aa22.72■■□□□ 1.23
CCDC40-206ENST00000572083 SMARCA1P28370 1054 aa22.72■■□□□ 1.23
CCDC40-206ENST00000572083 ERVFC1P60507 584 aa22.72■■□□□ 1.23
CCDC40-206ENST00000572083 KRT76Q01546 638 aa22.72■■□□□ 1.23
CCDC40-206ENST00000572083 ATP8B4Q8TF62 1192 aa22.72■■□□□ 1.23
CCDC40-206ENST00000572083 SUSD6Q92537 303 aa22.72■■□□□ 1.23
CCDC40-206ENST00000572083 NEK1Q96PY6 1258 aa22.72■■□□□ 1.23
CCDC40-206ENST00000572083 LZTS2Q9BRK4 669 aa22.72■■□□□ 1.23
CCDC40-206ENST00000572083 KCNH7Q9NS40 1196 aa22.72■■□□□ 1.23
CCDC40-206ENST00000572083 KDM3AQ9Y4C1 1321 aa22.72■■□□□ 1.23
CCDC40-206ENST00000572083 SMIM35A0A1B0GVV1 85 aa22.71■■□□□ 1.23
CCDC40-206ENST00000572083 ATF7P17544 494 aaPredicted RBP22.71■■□□□ 1.23
CCDC40-206ENST00000572083 SP100P23497 879 aaPredicted RBP22.71■■□□□ 1.23
CCDC40-206ENST00000572083 ACTR2P61160 394 aa22.71■■□□□ 1.23
CCDC40-206ENST00000572083 UBE3AQ05086 875 aa22.71■■□□□ 1.23
CCDC40-206ENST00000572083 DUSP6Q16828 381 aa22.71■■□□□ 1.23
CCDC40-206ENST00000572083 FAM102BQ5T8I3 360 aa22.71■■□□□ 1.23
CCDC40-206ENST00000572083 TTC22Q5TAA0 569 aa22.71■■□□□ 1.23
CCDC40-206ENST00000572083 THNSL1Q8IYQ7 743 aa22.71■■□□□ 1.23
CCDC40-206ENST00000572083 RUFY2Q8WXA3 655 aa22.71■■□□□ 1.23
CCDC40-206ENST00000572083 MAFGO15525 162 aa22.7■■□□□ 1.22
CCDC40-206ENST00000572083 GFRA3O60609 400 aa22.7■■□□□ 1.22
CCDC40-206ENST00000572083 CHMLP26374 656 aa22.7■■□□□ 1.22
CCDC40-206ENST00000572083 CASC1Q6TDU7 716 aa22.7■■□□□ 1.22
CCDC40-206ENST00000572083 MTHFD1LQ6UB35 978 aa22.7■■□□□ 1.22
CCDC40-206ENST00000572083 NFXL1Q6ZNB6 911 aa22.7■■□□□ 1.22
CCDC40-206ENST00000572083 RAB11FIP4Q86YS3 637 aa22.7■■□□□ 1.22
CCDC40-206ENST00000572083 CCDC82Q8N4S0 544 aa22.7■■□□□ 1.22
CCDC40-206ENST00000572083 COLGALT1Q8NBJ5 622 aa22.7■■□□□ 1.22
CCDC40-206ENST00000572083 CYP2W1Q8TAV3 490 aa22.7■■□□□ 1.22
CCDC40-206ENST00000572083 TNPO1Q92973 898 aaKnown RBP22.7■■□□□ 1.22
CCDC40-206ENST00000572083 ADAM2Q99965 735 aa22.7■■□□□ 1.22
CCDC40-206ENST00000572083 APOL5Q9BWW9 433 aa22.7■■□□□ 1.22
CCDC40-206ENST00000572083 ERVK-5Q9HDB9 667 aa22.7■■□□□ 1.22
CCDC40-206ENST00000572083 AAASQ9NRG9 546 aa22.7■■□□□ 1.22
CCDC40-206ENST00000572083 TMEM260Q9NX78 707 aa22.7■■□□□ 1.22
CCDC40-206ENST00000572083 NOC2LQ9Y3T9 749 aaKnown RBP22.7■■□□□ 1.22
CCDC40-206ENST00000572083 ZFHX2Q9C0A1 2572 aaPredicted RBP22.7■■□□□ 1.22
CCDC40-206ENST00000572083 DENND3A2RUS2 1198 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms