RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 ZC3H3Q8IXZ2 948 aaKnown RBP6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 C4orf19Q8IY42 314 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 ANKRD35Q8N283 1001 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 C17orf53Q8N3J3 647 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 FAM133AQ8N9E0 248 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 TC2NQ8N9U0 490 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 BANK1Q8NDB2 785 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 ZNF507Q8TCN5 953 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 GTF3C2Q8WUA4 911 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 SCFD1Q8WVM8 642 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 CNOT6LQ96LI5 555 aaKnown RBP6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 CEP63Q96MT8 703 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 TUBGCP2Q9BSJ2 902 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 PAGR1Q9BTK6 254 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 FGFBP2Q9BYJ0 223 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 KCTD10Q9H3F6 313 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 TMX1Q9H3N1 280 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 ZHX3Q9H4I2 956 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 OLFML3Q9NRN5 406 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 KCND1Q9NSA2 647 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 ANKEF1Q9NU02 776 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 TBC1D7Q9P0N9 293 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 RBPJLQ9UBG7 517 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 SEL1LQ9UBV2 794 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 PNMA3Q9UL41 463 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 ODF2LQ9ULJ1 636 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 COL4A3BPQ9Y5P4 624 aa6.8□□□□□ -1.32
TRAPPC1-204ENST00000571947 ASTN1O14525 1302 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 UBE4BO95155 1302 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 TRIP12Q14669 1992 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 B4DLN1 442 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 AKR1B15C9JRZ8 316 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 POTEB2H3BUK9 544 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 ZBTB39O15060 712 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 EIF3DO15371 548 aaKnown RBP eCLIP6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 PEX10O60683 326 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 DKC1O60832 514 aaKnown RBP eCLIP6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 RGS20O76081 388 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 CETPP11597 493 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 ERCC3P19447 782 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 EDNRBP24530 442 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 MTIF2P46199 727 aaKnown RBP6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 PSMC5P62195 406 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 FKBP3Q00688 224 aaKnown RBP6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 UBXN1Q04323 297 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 MAPK7Q13164 816 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 TRIM14Q14142 442 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 MAN2A1Q16706 1144 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 UGCGQ16739 394 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 EDRF1Q3B7T1 1238 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 PADI6Q6TGC4 694 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 PPFIBP1Q86W92 1011 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 CREBRFQ8IUR6 639 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 TMEM139Q8IV31 216 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 SMAP1Q8IYB5 467 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 SHCBP1Q8NEM2 672 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 CCDC51Q96ER9 411 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 PANX2Q96RD6 677 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 TIPINQ9BVW5 301 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 MROH8Q9H579 483 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 ZNF408Q9H9D4 720 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 RRAGCQ9HB90 399 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 PARVGQ9HBI0 331 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 GBA2Q9HCG7 927 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 TXNRD2Q9NNW7 524 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 SLC45A1Q9Y2W3 748 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 SAMM50Q9Y512 469 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 PCDHA10Q9Y5I2 948 aa6.79□□□□□ -1.32
TRAPPC1-204ENST00000571947 TRIP11Q15643 1979 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 CITO14578 2027 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 DNAJC25-GNG10A0A024R161 153 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 LOC102724159A0A0B4J2E5 919 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 PDXKO00764 312 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 CALUO43852 315 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 STX10O60499 249 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 MFAP3LO75121 409 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 PRPF6O94906 941 aaKnown RBP6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 STBD1O95210 358 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 ATG7O95352 703 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 GCNT3O95395 438 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 GNA14O95837 355 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 GYPCP04921 128 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 PSAPP07602 524 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 TPM1P09493 284 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 MYBP10242 640 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 MAPTP10636 758 aaKnown RBP6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 PRKCSHP14314 528 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 FECHP22830 423 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 YWHABP31946 246 aaKnown RBP6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 HOXD13P35453 343 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 RARRES1P49788 294 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 CASP5P51878 434 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 GTF2A2P52657 109 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 ADKP55263 362 aaKnown RBP6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 MARSP56192 900 aaKnown RBP6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 ERVK-9P63128 1117 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 ERVK-24P63145 666 aa6.78□□□□□ -1.32
TRAPPC1-204ENST00000571947 RBL2Q08999 1139 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms