RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 COG5Q9UP83 839 aa23.5■■□□□ 1.35
LITAF-205ENST00000570904 IPO5O00410 1097 aaKnown RBP23.49■■□□□ 1.35
LITAF-205ENST00000570904 BMP1P13497 986 aa23.49■■□□□ 1.35
LITAF-205ENST00000570904 CD52P31358 61 aa23.49■■□□□ 1.35
LITAF-205ENST00000570904 AAK1Q2M2I8 961 aa23.49■■□□□ 1.35
LITAF-205ENST00000570904 EPC2Q52LR7 807 aa23.49■■□□□ 1.35
LITAF-205ENST00000570904 NECAB3Q96P71 396 aaPredicted RBP23.49■■□□□ 1.35
LITAF-205ENST00000570904 ZNF577Q9BSK1 485 aa23.49■■□□□ 1.35
LITAF-205ENST00000570904 ZSWIM6Q9HCJ5 1215 aa23.49■■□□□ 1.35
LITAF-205ENST00000570904 PCDHA2Q9Y5H9 948 aa23.49■■□□□ 1.35
LITAF-205ENST00000570904 TRPV2Q9Y5S1 764 aa23.49■■□□□ 1.35
LITAF-205ENST00000570904 RPLP2P05387 115 aaKnown RBP23.48■■□□□ 1.35
LITAF-205ENST00000570904 EVCP57679 992 aa23.48■■□□□ 1.35
LITAF-205ENST00000570904 SETQ01105 290 aaPredicted RBP23.48■■□□□ 1.35
LITAF-205ENST00000570904 FAM160B1Q5W0V3 765 aa23.48■■□□□ 1.35
LITAF-205ENST00000570904 MCTP2Q6DN12 878 aa23.48■■□□□ 1.35
LITAF-205ENST00000570904 MTHFD1LQ6UB35 978 aa23.48■■□□□ 1.35
LITAF-205ENST00000570904 CCDC148Q8NFR7 591 aa23.48■■□□□ 1.35
LITAF-205ENST00000570904 LINC01599Q8WXQ3 324 aa23.48■■□□□ 1.35
LITAF-205ENST00000570904 HLA-CQ95604 372 aa23.48■■□□□ 1.35
LITAF-205ENST00000570904 LARP6Q9BRS8 491 aaKnown RBP23.48■■□□□ 1.35
LITAF-205ENST00000570904 COL4A6Q14031 1691 aa23.48■■□□□ 1.35
LITAF-205ENST00000570904 M0QZ92 97 aa23.47■■□□□ 1.35
LITAF-205ENST00000570904 ENPP3O14638 875 aa23.47■■□□□ 1.35
LITAF-205ENST00000570904 NEFLP07196 543 aa23.47■■□□□ 1.35
LITAF-205ENST00000570904 SLC26A2P50443 739 aa23.47■■□□□ 1.35
LITAF-205ENST00000570904 PRR16Q569H4 304 aa23.47■■□□□ 1.35
LITAF-205ENST00000570904 IER5Q5VY09 327 aa23.47■■□□□ 1.35
LITAF-205ENST00000570904 MIS18BP1Q6P0N0 1132 aa23.47■■□□□ 1.35
LITAF-205ENST00000570904 PDXDC2PQ6P474 469 aa23.47■■□□□ 1.35
LITAF-205ENST00000570904 BICD2Q8TD16 824 aa23.47■■□□□ 1.35
LITAF-205ENST00000570904 ATP8B4Q8TF62 1192 aa23.47■■□□□ 1.35
LITAF-205ENST00000570904 IL17RAQ96F46 866 aa23.47■■□□□ 1.35
LITAF-205ENST00000570904 SAMD11Q96NU1 681 aa23.47■■□□□ 1.35
LITAF-205ENST00000570904 ZNF302Q9NR11 478 aa23.47■■□□□ 1.35
LITAF-205ENST00000570904 CYP46A1Q9Y6A2 500 aa23.47■■□□□ 1.35
LITAF-205ENST00000570904 TCF20Q9UGU0 1960 aaKnown RBP23.47■■□□□ 1.35
LITAF-205ENST00000570904 SMIM35A0A1B0GVV1 85 aa23.46■■□□□ 1.35
LITAF-205ENST00000570904 EPB41L2O43491 1005 aaKnown RBP23.46■■□□□ 1.35
LITAF-205ENST00000570904 HBP1O60381 514 aa23.46■■□□□ 1.35
LITAF-205ENST00000570904 SWSAP1Q6NVH7 229 aa23.46■■□□□ 1.35
LITAF-205ENST00000570904 TMEM192Q8IY95 271 aa23.46■■□□□ 1.35
LITAF-205ENST00000570904 UPF3BQ9BZI7 483 aaKnown RBP23.46■■□□□ 1.35
LITAF-205ENST00000570904 ATP4AP20648 1035 aa23.45■■□□□ 1.34
LITAF-205ENST00000570904 KLRC1P26715 233 aa23.45■■□□□ 1.34
LITAF-205ENST00000570904 FIBCD1Q8N539 461 aa23.45■■□□□ 1.34
LITAF-205ENST00000570904 LENG9Q96B70 501 aa23.45■■□□□ 1.34
LITAF-205ENST00000570904 CELF4Q9BZC1 486 aaKnown RBP23.45■■□□□ 1.34
LITAF-205ENST00000570904 RC3H2Q9HBD1 1191 aaKnown RBP23.45■■□□□ 1.34
LITAF-205ENST00000570904 TBC1D22BQ9NU19 505 aa23.45■■□□□ 1.34
LITAF-205ENST00000570904 NCOR1O75376 2440 aa23.45■■□□□ 1.34
LITAF-205ENST00000570904 BRWD1Q9NSI6 2320 aa23.44■■□□□ 1.34
LITAF-205ENST00000570904 ADGRA3Q8IWK6 1321 aa23.44■■□□□ 1.34
LITAF-205ENST00000570904 IGSF9BQ9UPX0 1349 aa23.44■■□□□ 1.34
LITAF-205ENST00000570904 CIITAP33076 1130 aa23.44■■□□□ 1.34
LITAF-205ENST00000570904 GPM6BQ13491 265 aa23.44■■□□□ 1.34
LITAF-205ENST00000570904 ZNF746Q6NUN9 644 aaPredicted RBP23.44■■□□□ 1.34
LITAF-205ENST00000570904 TRMT1LQ7Z2T5 733 aaKnown RBP23.44■■□□□ 1.34
LITAF-205ENST00000570904 TCEAL9Q9UHQ7 104 aa23.44■■□□□ 1.34
LITAF-205ENST00000570904 PADI3Q9ULW8 664 aa23.44■■□□□ 1.34
LITAF-205ENST00000570904 BDP1A6H8Y1 2624 aa23.44■■□□□ 1.34
LITAF-205ENST00000570904 COL1A2P08123 1366 aa23.43■■□□□ 1.34
LITAF-205ENST00000570904 ZBTB42B2RXF5 422 aa23.43■■□□□ 1.34
LITAF-205ENST00000570904 H3BNC9 293 aa23.43■■□□□ 1.34
LITAF-205ENST00000570904 EDIL3O43854 480 aa23.43■■□□□ 1.34
LITAF-205ENST00000570904 CTNNB1P35222 781 aa23.43■■□□□ 1.34
LITAF-205ENST00000570904 NLRP5P59047 1200 aa23.43■■□□□ 1.34
LITAF-205ENST00000570904 KRT76Q01546 638 aa23.43■■□□□ 1.34
LITAF-205ENST00000570904 SSRP1Q08945 709 aaKnown RBP23.43■■□□□ 1.34
LITAF-205ENST00000570904 PAK2Q13177 524 aa23.43■■□□□ 1.34
LITAF-205ENST00000570904 STK3Q13188 491 aa23.43■■□□□ 1.34
LITAF-205ENST00000570904 RTN4RL1Q86UN2 441 aaPredicted RBP23.43■■□□□ 1.34
LITAF-205ENST00000570904 CKAP2LQ8IYA6 745 aa23.43■■□□□ 1.34
LITAF-205ENST00000570904 TRIM22Q8IYM9 498 aa23.43■■□□□ 1.34
LITAF-205ENST00000570904 MRPL38Q96DV4 380 aaKnown RBP23.43■■□□□ 1.34
LITAF-205ENST00000570904 TM6SF1Q9BZW5 370 aa23.43■■□□□ 1.34
LITAF-205ENST00000570904 GINS2Q9Y248 185 aa23.43■■□□□ 1.34
LITAF-205ENST00000570904 SQORQ9Y6N5 450 aa23.43■■□□□ 1.34
LITAF-205ENST00000570904 KDM3AQ9Y4C1 1321 aa23.42■■□□□ 1.34
LITAF-205ENST00000570904 PTPROQ16827 1216 aa23.42■■□□□ 1.34
LITAF-205ENST00000570904 TMEM266Q2M3C6 531 aa23.42■■□□□ 1.34
LITAF-205ENST00000570904 ZNF484Q5JVG2 852 aa23.42■■□□□ 1.34
LITAF-205ENST00000570904 SMAP1Q8IYB5 467 aaPredicted RBP23.42■■□□□ 1.34
LITAF-205ENST00000570904 KIAA0319LQ8IZA0 1049 aa23.42■■□□□ 1.34
LITAF-205ENST00000570904 NME8Q8N427 588 aa23.42■■□□□ 1.34
LITAF-205ENST00000570904 UBE2ZQ9H832 354 aaPredicted RBP23.42■■□□□ 1.34
LITAF-205ENST00000570904 SH3GLB2Q9NR46 395 aa23.42■■□□□ 1.34
LITAF-205ENST00000570904 PCDHA10Q9Y5I2 948 aa23.42■■□□□ 1.34
LITAF-205ENST00000570904 TTC3P53804 2025 aa23.42■■□□□ 1.34
LITAF-205ENST00000570904 NLRC5Q86WI3 1866 aa23.41■■□□□ 1.34
LITAF-205ENST00000570904 CPLX1O14810 134 aa23.41■■□□□ 1.34
LITAF-205ENST00000570904 PSAPP07602 524 aa23.41■■□□□ 1.34
LITAF-205ENST00000570904 LINC00271P0C7V0 271 aa23.41■■□□□ 1.34
LITAF-205ENST00000570904 ZNF689Q96CS4 500 aaPredicted RBP23.41■■□□□ 1.34
LITAF-205ENST00000570904 ZNF274Q96GC6 653 aaPredicted RBP23.41■■□□□ 1.34
LITAF-205ENST00000570904 PPP1R16BQ96T49 567 aa23.41■■□□□ 1.34
LITAF-205ENST00000570904 FTHL17Q9BXU8 183 aa23.41■■□□□ 1.34
LITAF-205ENST00000570904 TMX1Q9H3N1 280 aa23.41■■□□□ 1.34
LITAF-205ENST00000570904 GABBR1Q9UBS5 961 aa23.41■■□□□ 1.34
LITAF-205ENST00000570904 SAMM50Q9Y512 469 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms