RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 LMBR1Q8WVP7 490 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 MAGOHBQ96A72 148 aaKnown RBP16.71■□□□□ 0.27
USP43-202ENST00000570475 CCT8L2Q96SF2 557 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 DHX36Q9H2U1 1008 aaKnown RBP16.71■□□□□ 0.27
USP43-202ENST00000570475 SNX24Q9Y343 169 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 KDM3AQ9Y4C1 1321 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 VIMP08670 466 aaKnown RBP16.71■□□□□ 0.27
USP43-202ENST00000570475 SEPT2Q15019 361 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 SLC10A5Q5PT55 438 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 HGSNATQ68CP4 663 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 ARFGAP2Q8N6H7 521 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 MDM1Q8TC05 714 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 OSGEPQ9NPF4 335 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 DDX4Q9NQI0 724 aaKnown RBP16.71■□□□□ 0.27
USP43-202ENST00000570475 POLLQ9UGP5 575 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 ZBTB39O15060 712 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 ATP2B4P23634 1241 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 ARHGAP4P98171 946 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 METTL13Q8N6R0 699 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 USP38Q8NB14 1042 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 ATP6V1G3Q96LB4 118 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 TAF1DQ9H5J8 278 aaPredicted RBP16.7■□□□□ 0.26
USP43-202ENST00000570475 DUOX1Q9NRD9 1551 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 GPR75-ASB3A0A0A6YYF3 556 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 PPP1R37O75864 691 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 NR3C1P04150 777 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 EEF2P13639 858 aaKnown RBP16.7■□□□□ 0.26
USP43-202ENST00000570475 CDK17Q00537 523 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 ACTN3Q08043 901 aaPredicted RBP16.7■□□□□ 0.26
USP43-202ENST00000570475 CERKLQ49MI3 558 aaPredicted RBP16.7■□□□□ 0.26
USP43-202ENST00000570475 PROM2Q8N271 834 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 DNAJC19Q96DA6 116 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 PKD1L3Q7Z443 1732 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 UBAP1LF5GYI3 381 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 ERVK-9P63128 1117 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 IRX3P78415 501 aaPredicted RBP16.7■□□□□ 0.26
USP43-202ENST00000570475 NLRP14Q86W24 1093 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 CATSPER3Q86XQ3 398 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 RABGAP1Q9Y3P9 1069 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 SLIT2O94813 1529 aa16.7■□□□□ 0.26
USP43-202ENST00000570475 PARP4Q9UKK3 1724 aaKnown RBP16.69■□□□□ 0.26
USP43-202ENST00000570475 GOLGA6L10A0A0M3HER8 536 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 PPP1R11O60927 126 aaPredicted RBP16.69■□□□□ 0.26
USP43-202ENST00000570475 NOL4O94818 638 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 PPP4CP60510 307 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 E2F5Q15329 346 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 FAM186BQ8IYM0 893 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 GLG1Q92896 1179 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 PURBQ96QR8 312 aaKnown RBP16.69■□□□□ 0.26
USP43-202ENST00000570475 NUP98P52948 1817 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 ZNF142P52746 1687 aaPredicted RBP16.69■□□□□ 0.26
USP43-202ENST00000570475 PHF20L1A8MW92 1017 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 HSD17B3P37058 310 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 ICA1Q05084 483 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 MESDQ14696 234 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 KNOP1Q1ED39 458 aaKnown RBP16.69■□□□□ 0.26
USP43-202ENST00000570475 PRR5LQ6MZQ0 368 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 ZNF473Q8WTR7 871 aaKnown RBP16.69■□□□□ 0.26
USP43-202ENST00000570475 ELMO3Q96BJ8 720 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 EFCC1Q9HA90 598 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 GGT7Q9UJ14 662 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 PCDHAC2Q9Y5I4 1007 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 AKAP3O75969 853 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 MMS22LQ6ZRQ5 1243 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 RIOX1Q9H6W3 641 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 MLXIPLQ9NP71 852 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 FRMD4BQ9Y2L6 1034 aa16.69■□□□□ 0.26
USP43-202ENST00000570475 TRIM59Q8IWR1 403 aa16.68■□□□□ 0.26
USP43-202ENST00000570475 ZFPM1Q8IX07 1006 aa16.68■□□□□ 0.26
USP43-202ENST00000570475 TBC1D16Q8TBP0 767 aa16.68■□□□□ 0.26
USP43-202ENST00000570475 TBC1D22AQ8WUA7 517 aa16.68■□□□□ 0.26
USP43-202ENST00000570475 NAGPAQ9UK23 515 aa16.68■□□□□ 0.26
USP43-202ENST00000570475 GLI3P10071 1580 aa16.68■□□□□ 0.26
USP43-202ENST00000570475 TM4SF1P30408 202 aa16.68■□□□□ 0.26
USP43-202ENST00000570475 GLE1Q53GS7 698 aaKnown RBP16.68■□□□□ 0.26
USP43-202ENST00000570475 FBXO11Q86XK2 927 aa16.68■□□□□ 0.26
USP43-202ENST00000570475 WHAMMQ8TF30 809 aa16.68■□□□□ 0.26
USP43-202ENST00000570475 HOOK2Q96ED9 719 aa16.68■□□□□ 0.26
USP43-202ENST00000570475 FLT3P36888 993 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 MDH1P40925 334 aaKnown RBP16.67■□□□□ 0.26
USP43-202ENST00000570475 GALCP54803 685 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 SP4Q02446 784 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 NBPF9Q3BBW0 867 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 CCDC38Q502W7 563 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 ODR4Q5SWX8 454 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 GPATCH4Q5T3I0 446 aaKnown RBP16.67■□□□□ 0.26
USP43-202ENST00000570475 RUFY4Q6ZNE9 571 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 PNMA8AQ86V59 439 aaPredicted RBP16.67■□□□□ 0.26
USP43-202ENST00000570475 FAM178BQ8IXR5 827 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 MRRFQ96E11 262 aaKnown RBP16.67■□□□□ 0.26
USP43-202ENST00000570475 CEP63Q96MT8 703 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 CICQ96RK0 1608 aaPredicted RBP16.67■□□□□ 0.26
USP43-202ENST00000570475 RHBDL3P58872 404 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 MEI1Q5TIA1 1274 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 OTUD6AQ7L8S5 288 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 TEKT1Q969V4 418 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 PAIP2Q9BPZ3 127 aaKnown RBP16.67■□□□□ 0.26
USP43-202ENST00000570475 RNF14Q9UBS8 474 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 DNAJC12Q9UKB3 198 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms