RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	PHF20L1	A8MW92	1017 aa		13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	MEIS2	O14770	477 aa		13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	TAL1	P17542	331 aa	Predicted RBP	13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	TEC	P42680	631 aa		13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	FXR2	P51116	673 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	STAT2	P52630	851 aa		13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	FAM83B	Q5T0W9	1011 aa		13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	WDR59	Q6PJI9	974 aa		13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	SAMD7	Q7Z3H4	446 aa		13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	CABP7	Q86V35	215 aa		13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	CREG2	Q8IUH2	290 aa		13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	CAVIN3	Q969G5	261 aa		13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	RNPC3	Q96LT9	517 aa	Known RBP	13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	ZIM3	Q96PE6	472 aa		13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	P2RX7	Q99572	595 aa	Known RBP	13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	MMTAG2	Q9BU76	263 aa	Known RBP	13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	CPSF2	Q9P2I0	782 aa	Known RBP	13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	SNX12	Q9UMY4	172 aa		13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	DOCK1	Q14185	1865 aa		13.14	□□□□□ -0.31
SPG7-222	ENST00000569820	RCCD1	A6NED2	376 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	PES1	O00541	588 aa	Known RBP	13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	OPLAH	O14841	1288 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	CAND2	O75155	1236 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	PPP1R37	O75864	691 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	KRT14	P02533	472 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	TXK	P42681	527 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	CCNH	P51946	323 aa	Predicted RBP	13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	SLC7A5	Q01650	507 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	GUCY1A3	Q02108	690 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	TNFAIP1	Q13829	316 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	USH1G	Q495M9	461 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	SPATA4	Q8NEY3	305 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	RASSF8	Q8NHQ8	419 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	NELFB	Q8WX92	580 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	SLC40A1	Q9NP59	571 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	IRAK4	Q9NWZ3	460 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	STIM2	Q9P246	746 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	CAPN11	Q9UMQ6	739 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	GJA3	Q9Y6H8	435 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	ASNS	P08243	561 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	PLCG1	P19174	1290 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	MATR3	P43243	847 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	APBA1	Q02410	837 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	KIF5A	Q12840	1032 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	IFT88	Q13099	833 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	DRP2	Q13474	957 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	RBBP5	Q15291	538 aa	Known RBP	13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	PTGIS	Q16647	500 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	CCDC84	Q86UT8	332 aa	Predicted RBP	13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	MB21D1	Q8N884	522 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	CRYGN	Q8WXF5	182 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	PURB	Q96QR8	312 aa	Known RBP	13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	PLIN2	Q99541	437 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	ANO3	Q9BYT9	981 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	KBTBD4	Q9NVX7	518 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	DDX25	Q9UHL0	483 aa	Known RBP	13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	CNOT7	Q9UIV1	285 aa	Known RBP	13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	GGA2	Q9UJY4	613 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	UTRN	P46939	3433 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	SBF1	O95248	1867 aa		13.13	□□□□□ -0.31
SPG7-222	ENST00000569820	GOLGA6L7	A0A1B0GV03	622 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820		A0A1W2PQC6	194 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	MRPS25	P82663	173 aa	Known RBP	13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	AP3B2	Q13367	1082 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	SNCB	Q16143	134 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	MEA1	Q16626	185 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	ANKRD23	Q86SG2	305 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	NLRP14	Q86W24	1093 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	CEP57	Q86XR8	500 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	MYCBPAP	Q8TBZ2	947 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	CCT8L2	Q96SF2	557 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	CUEDC2	Q9H467	287 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	DUSP10	Q9Y6W6	482 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	LGALS16	A8MUM7	142 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	NR1D1	P20393	614 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	ZYX	Q15942	572 aa	Known RBP	13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	CFAP58	Q5T655	872 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	CCDC170	Q8IYT3	715 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	KLHL23	Q8NBE8	558 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	TRIM58	Q8NG06	486 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	HAS1	Q92839	578 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	TSGA10	Q9BZW7	698 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	SH2D4A	Q9H788	454 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	POLD4	Q9HCU8	107 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	HACL1	Q9UJ83	578 aa		13.12	□□□□□ -0.31
SPG7-222	ENST00000569820	POTEM	A6NI47	508 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	RPN1	P04843	607 aa	Known RBP	13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	IBSP	P21815	317 aa	Predicted RBP	13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	TNFRSF8	P28908	595 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	VAV2	P52735	878 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	PDCD2	Q16342	344 aa	Predicted RBP	13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	CCDC181	Q5TID7	509 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	HAUS3	Q68CZ6	603 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	CCDC50	Q8IVM0	306 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	CCDC114	Q96M63	670 aa		13.11	□□□□□ -0.31
SPG7-222	ENST00000569820	MBOAT7	Q96N66	472 aa		13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms