RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	ATP8B2	P98198	1209 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	SPEM2	Q0P670	501 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	STXBP2	Q15833	593 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	SOWAHC	Q53LP3	525 aa	Predicted RBP	7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	PPP4R3B	Q5MIZ7	849 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	FBXO47	Q5MNV8	452 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	RARS2	Q5T160	578 aa	Known RBP	7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	KANK3	Q6NY19	840 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	RUFY4	Q6ZNE9	571 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	OTOP3	Q7RTS5	596 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	GPIHBP1	Q8IV16	184 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	ZNF444	Q8N0Y2	327 aa	Predicted RBP	7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	STK11IP	Q8N1F8	1099 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	MRPL43	Q8N983	215 aa	Known RBP	7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	MRPS27	Q92552	414 aa	Known RBP	7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	DDX12P	Q92771	950 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	MAP4K1	Q92918	833 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	CHMP4C	Q96CF2	233 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	IWS1	Q96ST2	819 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	GPR20	Q99678	358 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	TUT1	Q9H6E5	874 aa	Known RBP	7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	SETD4	Q9NVD3	440 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	ZSCAN32	Q9NX65	697 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	CA14	Q9ULX7	337 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	PLIN4	Q96Q06	1357 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	TMEM8B	A6NDV4	472 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	EIF3J	O75822	258 aa	Known RBP	7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	CHGB	P05060	677 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	RFX1	P22670	979 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	FOSB	P53539	338 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	RARS	P54136	660 aa	Known RBP	7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	CSTF1	Q05048	431 aa	Known RBP	7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	UBE3C	Q15386	1083 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	CELF3	Q5SZQ8	465 aa	Known RBP	7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	TTBK2	Q6IQ55	1244 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	GIMAP6	Q6P9H5	292 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	TSHZ1	Q6ZSZ6	1077 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	THNSL1	Q8IYQ7	743 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	SLC44A3	Q8N4M1	653 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	COLGALT1	Q8NBJ5	622 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	PJA1	Q8NG27	643 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	FEZF2	Q8TBJ5	459 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	NSUN6	Q8TEA1	469 aa	Known RBP	7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	SPATA33	Q96N06	139 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	TAAR1	Q96RJ0	339 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	MAF1	Q9H063	256 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	AGO3	Q9H9G7	860 aa	Known RBP	7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	PUF60	Q9UHX1	559 aa	Known RBP	7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	GMEB2	Q9UKD1	530 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	PNMA2	Q9UL42	364 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	FRY	Q5TBA9	3013 aa		7.32	□□□□□ -1.24
BBS4-218	ENST00000569440	C2orf71	A6NGG8	1288 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	GSG1L2	A8MUP6	293 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	MINDY4B	A8MYZ0	360 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	LAMTOR5	O43504	91 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	GDF9	O60383	454 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	LRRN2	O75325	713 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	SRF	P11831	508 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	SCG2	P13521	617 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	SLC16A2	P36021	539 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	STARD6	P59095	220 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	CSRP2	Q16527	193 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	SYDE2	Q5VT97	1194 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	GPR149	Q86SP6	731 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	GPR152	Q8TDT2	470 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	SYTL5	Q8TDW5	730 aa	Predicted RBP	7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	RSAD2	Q8WXG1	361 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	STRBP	Q96SI9	672 aa	Known RBP	7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	FTHL17	Q9BXU8	183 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	FOXQ1	Q9C009	403 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	PUS7L	Q9H0K6	701 aa	Known RBP	7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	CWH43	Q9H720	699 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	ZNF287	Q9HBT7	754 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	ENTPD7	Q9NQZ7	604 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	ARHGEF3	Q9NR81	526 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	SEMA4G	Q9NTN9	838 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	TYW1	Q9NV66	732 aa	Known RBP	7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	DZANK1	Q9NVP4	752 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	COL20A1	Q9P218	1284 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	HCST	Q9UBK5	93 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	WASF3	Q9UPY6	502 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	PCDHGA10	Q9Y5H3	936 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	MRVI1	Q9Y6F6	885 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	TRIP12	Q14669	1992 aa	Predicted RBP	7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	GREB1L	Q9C091	1923 aa	Predicted RBP	7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	MAST4	O15021	2626 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	UNC79	Q9P2D8	2635 aa		7.31	□□□□□ -1.24
BBS4-218	ENST00000569440	WDR19	Q8NEZ3	1342 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	NAV1	Q8NEY1	1877 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	N4BP1	O75113	896 aa	Known RBP	7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	BCAR3	O75815	825 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	LGALS2	P05162	132 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	RET	P07949	1114 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	TSPY3	P0CV98	308 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	TSPY8	P0CW00	308 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	CD52	P31358	61 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	NOV	P48745	357 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	LIMK1	P53667	647 aa		7.3	□□□□□ -1.24
BBS4-218	ENST00000569440	TFAP4	Q01664	338 aa		7.3	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms