RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 COL12A1Q99715 3063 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 ZBED9Q6R2W3 1325 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 TCRBV5S4A2TA0A5A2 114 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 KANSL1LA0AUZ9 987 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 C2orf71A6NGG8 1288 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 PRKAB2O43741 272 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 TTLL1O95922 423 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 SMIM10L2AP0DMW4 78 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 SMIM10L2BP0DMW5 78 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 GNAT1P11488 350 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 PDE6AP16499 860 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 SPINK2P20155 84 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 GATMP50440 423 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 SNAP25P60880 206 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 ADAM17P78536 824 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 MGAT3Q09327 533 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 FOXC1Q12948 553 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 IKQ13123 557 aaPredicted RBP7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 PTPN14Q15678 1187 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 CCDC6Q16204 474 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 SLC9C2Q5TAH2 1124 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 LARP1BQ659C4 914 aaKnown RBP7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 PSAPL1Q6NUJ1 521 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 KANK3Q6NY19 840 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 SEPT14Q6ZU15 432 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 TMC7Q7Z402 723 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 GPR149Q86SP6 731 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 CLEC4DQ8WXI8 215 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 PIK3R5Q8WYR1 880 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 MTMR4Q9NYA4 1195 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 EPS15L1Q9UBC2 864 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 CREBBPQ92793 2442 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 LAMA4Q16363 1823 aa7.84□□□□□ -1.15
HERPUD1-217ENST00000569429 DOCK5Q9H7D0 1870 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 NRCAMQ92823 1304 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 ZNF532Q9HCE3 1301 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 H3BRB1 525 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 SCG2P13521 617 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 PI4KAP42356 2102 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 SLC1A4P43007 532 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 NRLP54845 237 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 ATP8B2P98198 1209 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 SMC1AQ14683 1233 aaKnown RBP7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 LETM2Q2VYF4 491 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 AASDHQ4L235 1098 aaPredicted RBP7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 FBXO47Q5MNV8 452 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 TSSK4Q6SA08 328 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 TMC5Q6UXY8 1006 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 TSHZ1Q6ZSZ6 1077 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 FEZF2Q8TBJ5 459 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 CEP95Q96GE4 821 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 SCNM1Q9BWG6 230 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 RANBP17Q9H2T7 1088 aaKnown RBP7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 TUT1Q9H6E5 874 aaKnown RBP7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 ARMT1Q9H993 441 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 SMC4Q9NTJ3 1288 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 DBNLQ9UJU6 430 aaKnown RBP7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 U3KPZ7 1027 aaPredicted RBP7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 PTPRQQ9UMZ3 2332 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 NOTCH2Q04721 2471 aa7.83□□□□□ -1.16
HERPUD1-217ENST00000569429 FRMPD2Q68DX3 1309 aaPredicted RBP7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 N4BP1O75113 896 aaKnown RBP7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 TDGF1P13385 188 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 LAG3P18627 525 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 NCLP19338 710 aaKnown RBP7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 TTF1Q15361 905 aaPredicted RBP7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 COL28A1Q2UY09 1125 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 HSDL1Q3SXM5 330 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 STPG1Q5TH74 334 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 MYSM1Q5VVJ2 828 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 RCSD1Q6JBY9 416 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 CTR9Q6PD62 1173 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 C19orf48Q6RUI8 117 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 RSPO2Q6UXX9 243 aaPredicted RBP7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 C15orf39Q6ZRI6 1047 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 PROSER1Q86XN7 944 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 NUP205Q92621 2012 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 GLG1Q92896 1179 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 CLDN23Q96B33 292 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 DDRGK1Q96HY6 314 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 KLHL5Q96PQ7 755 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 MEIS3Q99687 375 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 CWH43Q9H720 699 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 SFXN1Q9H9B4 322 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 AGO3Q9H9G7 860 aaKnown RBP7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 MKNK2Q9HBH9 465 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 TYW1Q9NV66 732 aaKnown RBP7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 ISY1Q9ULR0 285 aaKnown RBP7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 SQORQ9Y6N5 450 aa7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 GOLGA4Q13439 2230 aaKnown RBP7.82□□□□□ -1.16
HERPUD1-217ENST00000569429 EVPLQ92817 2033 aa7.81□□□□□ -1.16
HERPUD1-217ENST00000569429 KNTC1P50748 2209 aa7.81□□□□□ -1.16
HERPUD1-217ENST00000569429 GON4LQ3T8J9 2241 aa7.81□□□□□ -1.16
HERPUD1-217ENST00000569429 FAM170BA6NMN3 283 aa7.81□□□□□ -1.16
HERPUD1-217ENST00000569429 TBKBP1A7MCY6 615 aa7.81□□□□□ -1.16
HERPUD1-217ENST00000569429 TOP3BO95985 862 aaKnown RBP7.81□□□□□ -1.16
HERPUD1-217ENST00000569429 CAPNS1P04632 268 aa7.81□□□□□ -1.16
HERPUD1-217ENST00000569429 PLA2G2AP14555 144 aa7.81□□□□□ -1.16
HERPUD1-217ENST00000569429 EPCAMP16422 314 aa7.81□□□□□ -1.16
HERPUD1-217ENST00000569429 MCCP23508 829 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms