RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 MYLIPQ8WY64 445 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 SEPT8Q92599 483 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 LENG9Q96B70 501 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 ZBED2Q9BTP6 218 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 FAM49AQ9H0Q0 323 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-225ENST00000569245 CHMP5Q9NZZ3 219 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 YBX2Q9Y2T7 364 aaKnown RBP16.35■□□□□ 0.21
COMMD4-225ENST00000569245 PCDHA11Q9Y5I1 949 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 PCDHA10Q9Y5I2 948 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 COL6A3P12111 3177 aa16.35■□□□□ 0.21
COMMD4-225ENST00000569245 IGKV6D-21A0A0A0MT36 114 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 CHMP2AO43633 222 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 EDIL3O43854 480 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 EFCAB14O75071 495 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 TDP2O95551 362 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 SYT1P21579 422 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 FOSBP53539 338 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 WDR5P61964 334 aaKnown RBP16.34■□□□□ 0.21
COMMD4-225ENST00000569245 NUCB2P80303 420 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 TRIM29Q14134 588 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 LETM2Q2VYF4 491 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 LRCH2Q5VUJ6 765 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 LARP1BQ659C4 914 aaKnown RBP16.34■□□□□ 0.21
COMMD4-225ENST00000569245 HERC6Q8IVU3 1022 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 CCDC60Q8IWA6 550 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-225ENST00000569245 DBF4BQ8NFT6 615 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 TRAPPC12Q8WVT3 735 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 ZBTB10Q96DT7 871 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 BRMS1Q9HCU9 246 aa16.34■□□□□ 0.21
COMMD4-225ENST00000569245 CYP3A7-CYP3A51PA0A087WV96 503 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 MBLAC1A4D2B0 266 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-225ENST00000569245 WDR64B1ANS9 1081 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 RBAK-RBAKDNI3L0D1 243 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 HBP1O60381 514 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 FOSL2P15408 326 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 CYP3A7P24462 503 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 TCTN1Q2MV58 587 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 Q4G0T1 1027 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 PPP2R2DQ66LE6 453 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 PIK3AP1Q6ZUJ8 805 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 OXER1Q8TDS5 423 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 ATP8B4Q8TF62 1192 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 GJA10Q969M2 543 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 RIT2Q99578 217 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 TEKT3Q9BXF9 490 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 DISC1Q9NRI5 854 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 GABBR1Q9UBS5 961 aa16.33■□□□□ 0.2
COMMD4-225ENST00000569245 DDX25Q9UHL0 483 aaKnown RBP16.33■□□□□ 0.2
COMMD4-225ENST00000569245 M0QZ92 97 aa16.32■□□□□ 0.2
COMMD4-225ENST00000569245 STX6O43752 255 aa16.32■□□□□ 0.2
COMMD4-225ENST00000569245 TLL1O43897 1013 aa16.32■□□□□ 0.2
COMMD4-225ENST00000569245 MARCH6O60337 910 aa16.32■□□□□ 0.2
COMMD4-225ENST00000569245 CHRNA1P02708 482 aa16.32■□□□□ 0.2
COMMD4-225ENST00000569245 RPLP2P05387 115 aaKnown RBP16.32■□□□□ 0.2
COMMD4-225ENST00000569245 KRT2P35908 639 aa16.32■□□□□ 0.2
COMMD4-225ENST00000569245 DEFB103AP81534 67 aa16.32■□□□□ 0.2
COMMD4-225ENST00000569245 SCN5AQ14524 2016 aa16.32■□□□□ 0.2
COMMD4-225ENST00000569245 PLEKHG4Q58EX7 1191 aa16.32■□□□□ 0.2
COMMD4-225ENST00000569245 FAM26DQ5JW98 314 aa16.32■□□□□ 0.2
COMMD4-225ENST00000569245 IER5Q5VY09 327 aa16.32■□□□□ 0.2
COMMD4-225ENST00000569245 TMCO2Q7Z6W1 182 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-225ENST00000569245 RPAINQ86UA6 219 aa16.32■□□□□ 0.2
COMMD4-225ENST00000569245 SLC5A5Q92911 643 aa16.32■□□□□ 0.2
COMMD4-225ENST00000569245 PCDHA2Q9Y5H9 948 aa16.32■□□□□ 0.2
COMMD4-225ENST00000569245 TRIP12Q14669 1992 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-225ENST00000569245 CCNT1O60563 726 aaKnown RBP16.31■□□□□ 0.2
COMMD4-225ENST00000569245 BRD1O95696 1058 aa16.31■□□□□ 0.2
COMMD4-225ENST00000569245 AMHP03971 560 aa16.31■□□□□ 0.2
COMMD4-225ENST00000569245 CA3P07451 260 aa16.31■□□□□ 0.2
COMMD4-225ENST00000569245 GHRP10912 638 aa16.31■□□□□ 0.2
COMMD4-225ENST00000569245 KLRC1P26715 233 aa16.31■□□□□ 0.2
COMMD4-225ENST00000569245 TMEM62Q0P6H9 643 aa16.31■□□□□ 0.2
COMMD4-225ENST00000569245 ZNF484Q5JVG2 852 aa16.31■□□□□ 0.2
COMMD4-225ENST00000569245 FAM117BQ6P1L5 589 aa16.31■□□□□ 0.2
COMMD4-225ENST00000569245 MTHFD1LQ6UB35 978 aa16.31■□□□□ 0.2
COMMD4-225ENST00000569245 MOXD1Q6UVY6 613 aa16.31■□□□□ 0.2
COMMD4-225ENST00000569245 NEK8Q86SG6 692 aa16.31■□□□□ 0.2
COMMD4-225ENST00000569245 IFIH1Q9BYX4 1025 aaKnown RBP16.31■□□□□ 0.2
COMMD4-225ENST00000569245 UNC45AQ9H3U1 944 aa16.31■□□□□ 0.2
COMMD4-225ENST00000569245 PRDM12Q9H4Q4 367 aa16.31■□□□□ 0.2
COMMD4-225ENST00000569245 MAFBQ9Y5Q3 323 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-225ENST00000569245 CHD9Q3L8U1 2897 aa16.3■□□□□ 0.2
COMMD4-225ENST00000569245 CDH23Q9H251 3354 aa16.3■□□□□ 0.2
COMMD4-225ENST00000569245 SFNP31947 248 aa16.3■□□□□ 0.2
COMMD4-225ENST00000569245 JAK3P52333 1124 aa16.3■□□□□ 0.2
COMMD4-225ENST00000569245 MRPS6P82932 125 aaKnown RBP16.3■□□□□ 0.2
COMMD4-225ENST00000569245 NR5A1Q13285 461 aa16.3■□□□□ 0.2
COMMD4-225ENST00000569245 PKP1Q13835 747 aa16.3■□□□□ 0.2
COMMD4-225ENST00000569245 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.3■□□□□ 0.2
COMMD4-225ENST00000569245 MIER3Q7Z3K6 550 aa16.3■□□□□ 0.2
COMMD4-225ENST00000569245 MYOCDQ8IZQ8 938 aa16.3■□□□□ 0.2
COMMD4-225ENST00000569245 FBXO18Q8NFZ0 1043 aa16.3■□□□□ 0.2
COMMD4-225ENST00000569245 BBXQ8WY36 941 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-225ENST00000569245 C8orf76Q96K31 380 aa16.3■□□□□ 0.2
COMMD4-225ENST00000569245 GAS2L1Q99501 681 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-225ENST00000569245 NAP1L4Q99733 375 aaKnown RBP16.3■□□□□ 0.2
COMMD4-225ENST00000569245 OSBPL7Q9BZF2 842 aa16.3■□□□□ 0.2
COMMD4-225ENST00000569245 NRBP2Q9NSY0 501 aa16.3■□□□□ 0.2
COMMD4-225ENST00000569245 MTMR6Q9Y217 621 aa16.3■□□□□ 0.2
COMMD4-225ENST00000569245 ZDHHC9Q9Y397 364 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms